Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 AC010332.2-201ENST00000613083 1904 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 RNU5B-1-201ENST00000363286 116 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 SNORD116-9-201ENST00000384000 95 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 RNU6-641P-201ENST00000384006 107 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 RNU6V-201ENST00000384105 107 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 SNORD116-3-201ENST00000384287 95 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 SNORD116-8-201ENST00000384365 95 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 SNORD116-7-201ENST00000384404 95 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 RNU6-769P-201ENST00000384407 104 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 SNORD116-5-201ENST00000384462 95 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 RNU6-817P-201ENST00000391083 104 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 SNORD111-201ENST00000408139 94 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.11□□□□□ -2.43
COL7A1Q02388 RNU7-141P-201ENST00000459304 62 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 AC107027.2-201ENST00000512197 115 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 RNU7-149P-201ENST00000516739 59 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 AP000676.1-201ENST00000533307 52 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 AC087894.1-201ENST00000538359 518 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 ELOCP32-201ENST00000548625 324 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 AC007012.1-201ENST00000567192 175 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 MIR5706-201ENST00000579841 80 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 MIR5692C1-201ENST00000585309 91 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 AP000753.3-201ENST00000604083 169 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 Z84480.1-201ENST00000605131 311 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 AF250324.2-201ENST00000608299 610 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 AC010999.1-201ENST00000611856 324 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 MIR6129-201ENST00000616087 109 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 AC103705.1-201ENST00000619013 241 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-0.11□□□□□ -2.43
COL7A1Q02388 AC005592.1-201ENST00000566527 1640 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU4-36P-201ENST00000364294 144 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-827P-201ENST00000365553 106 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-811P-201ENST00000384069 107 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 SNORA24-201ENST00000384096 131 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-187P-201ENST00000384139 106 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-692P-201ENST00000384496 107 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-1127P-201ENST00000384580 107 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-747P-201ENST00000390928 104 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-241P-201ENST00000391148 104 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RPS29P13-201ENST00000402041 169 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-447P-201ENST00000410293 104 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-355P-201ENST00000410427 104 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-791P-201ENST00000410467 104 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-705P-201ENST00000410601 104 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-860P-201ENST00000410860 104 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-607P-201ENST00000411283 108 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-785P-201ENST00000411324 104 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 MLLT10P1-201ENST00000418346 262 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 AC007283.2-201ENST00000424739 197 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 HLA-S-202ENST00000425174 53 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 MTND1P20-201ENST00000430341 950 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.12□□□□□ -2.43
COL7A1Q02388 EPS15P1-201ENST00000448836 336 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RPL30P10-201ENST00000488148 337 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 AC022447.4-201ENST00000504053 364 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-983P-201ENST00000516004 103 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 Y_RNA.672-201ENST00000516289 104 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 AC011195.1-201ENST00000578177 177 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 MIR4677-201ENST00000584153 80 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.12□□□□□ -2.43
COL7A1Q02388 AL359999.1-201ENST00000604513 294 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 U6.90-201ENST00000614007 104 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 MIR7844-201ENST00000616161 122 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 uc_338.4-201ENST00000616635 176 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 U6.70-201ENST00000620287 104 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 MIR6514-201ENST00000622549 70 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.12□□□□□ -2.43
COL7A1Q02388 AC091948.2-201ENST00000636510 279 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 ZNF299P-201ENST00000406845 1804 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 AC073343.1-201ENST00000328239 651 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-433P-201ENST00000363216 104 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-501P-201ENST00000364072 100 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU4-16P-201ENST00000364737 141 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-336P-201ENST00000364891 107 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-1200P-201ENST00000384162 107 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 SNORA67.2-201ENST00000384300 149 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 SNORA72-201ENST00000384339 132 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-424P-201ENST00000384367 105 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.12□□□□□ -2.43
COL7A1Q02388 RNU6-679P-201ENST00000391003 106 ntBASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms