Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.4□□□□□ -2.47
H3F3AP84243 RNU7-63P-201ENST00000459054 62 ntBASIC-0.4□□□□□ -2.47
H3F3AP84243 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.4□□□□□ -2.47
H3F3AP84243 MIR548AR-201ENST00000582191 57 ntBASIC-0.4□□□□□ -2.47
H3F3AP84243 AC011458.1-201ENST00000604034 617 ntBASIC-0.4□□□□□ -2.47
H3F3AP84243 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.4□□□□□ -2.47
H3F3AP84243 MIR499B-201ENST00000636498 73 ntBASIC-0.4□□□□□ -2.47
H3F3AP84243 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.4□□□□□ -2.47
H3F3AP84243 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.41□□□□□ -2.48
H3F3AP84243 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.41□□□□□ -2.48
H3F3AP84243 RNU6-747P-201ENST00000390928 104 ntBASIC-0.41□□□□□ -2.48
H3F3AP84243 RNU6-241P-201ENST00000391148 104 ntBASIC-0.41□□□□□ -2.48
H3F3AP84243 MIR873-201ENST00000401120 77 ntBASIC-0.41□□□□□ -2.48
H3F3AP84243 MTCO2P33-201ENST00000402100 465 ntBASIC-0.41□□□□□ -2.48
H3F3AP84243 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.41□□□□□ -2.48
H3F3AP84243 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.41□□□□□ -2.48
H3F3AP84243 RNU6-311P-201ENST00000516224 102 ntBASIC-0.41□□□□□ -2.48
H3F3AP84243 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.41□□□□□ -2.48
H3F3AP84243 RNA5SP268-201ENST00000516828 124 ntBASIC-0.41□□□□□ -2.48
H3F3AP84243 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.41□□□□□ -2.48
H3F3AP84243 RNU6-996P-201ENST00000365438 107 ntBASIC-0.42□□□□□ -2.48
H3F3AP84243 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.42□□□□□ -2.48
H3F3AP84243 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.42□□□□□ -2.48
H3F3AP84243 BTF3P11-201ENST00000426582 477 ntBASIC-0.42□□□□□ -2.48
H3F3AP84243 AC073415.1-201ENST00000449240 153 ntBASIC-0.42□□□□□ -2.48
H3F3AP84243 AC005042.3-201ENST00000453230 174 ntBASIC-0.42□□□□□ -2.48
H3F3AP84243 RPL30P10-201ENST00000488148 337 ntBASIC-0.42□□□□□ -2.48
H3F3AP84243 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.42□□□□□ -2.48
H3F3AP84243 SNORA19.2-201ENST00000516013 114 ntBASIC-0.42□□□□□ -2.48
H3F3AP84243 RNU6-1038P-201ENST00000516516 104 ntBASIC-0.42□□□□□ -2.48
H3F3AP84243 RN7SKP287-201ENST00000516546 266 ntBASIC-0.42□□□□□ -2.48
H3F3AP84243 MIR4743-201ENST00000584576 69 ntBASIC-0.42□□□□□ -2.48
H3F3AP84243 AL133215.3-201ENST00000609801 448 ntBASIC-0.42□□□□□ -2.48
H3F3AP84243 AL158063.1-201ENST00000615349 536 ntBASIC-0.42□□□□□ -2.48
H3F3AP84243 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.43□□□□□ -2.48
H3F3AP84243 RNU6-302P-201ENST00000365249 107 ntBASIC-0.43□□□□□ -2.48
H3F3AP84243 RNA5SP117-201ENST00000365294 118 ntBASIC-0.43□□□□□ -2.48
H3F3AP84243 SNORA2A-201ENST00000383885 135 ntBASIC-0.43□□□□□ -2.48
H3F3AP84243 RNU6-790P-201ENST00000384479 105 ntBASIC-0.43□□□□□ -2.48
H3F3AP84243 MIR760-201ENST00000390220 80 ntBASIC-0.43□□□□□ -2.48
H3F3AP84243 SNORA26-201ENST00000391286 122 ntBASIC-0.43□□□□□ -2.48
H3F3AP84243 AL354751.2-201ENST00000415471 210 ntBASIC-0.43□□□□□ -2.48
H3F3AP84243 MTATP6P18-201ENST00000417994 673 ntBASIC-0.43□□□□□ -2.48
H3F3AP84243 HMGN2P32-201ENST00000444648 269 ntBASIC-0.43□□□□□ -2.48
H3F3AP84243 MTCO3P38-201ENST00000468910 766 ntBASIC-0.43□□□□□ -2.48
H3F3AP84243 AC046134.1-201ENST00000514454 666 ntBASIC-0.43□□□□□ -2.48
H3F3AP84243 RNU4-49P-201ENST00000516080 140 ntBASIC-0.43□□□□□ -2.48
H3F3AP84243 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-0.43□□□□□ -2.48
H3F3AP84243 MIR4424-201ENST00000585257 86 ntBASIC-0.43□□□□□ -2.48
H3F3AP84243 AC010525.2-201ENST00000590920 195 ntBASIC-0.43□□□□□ -2.48
H3F3AP84243 AC005176.2-201ENST00000596933 147 ntBASIC-0.43□□□□□ -2.48
H3F3AP84243 AL670379.3-201ENST00000605040 251 ntBASIC-0.43□□□□□ -2.48
H3F3AP84243 AC072046.2-201ENST00000618366 268 ntBASIC-0.43□□□□□ -2.48
H3F3AP84243 SNORD114-12-201ENST00000365400 75 ntBASIC-0.44□□□□□ -2.48
H3F3AP84243 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.44□□□□□ -2.48
H3F3AP84243 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.44□□□□□ -2.48
H3F3AP84243 RNU6-364P-201ENST00000384387 107 ntBASIC-0.44□□□□□ -2.48
H3F3AP84243 RNU6-297P-201ENST00000384636 107 ntBASIC-0.44□□□□□ -2.48
H3F3AP84243 MIR522-201ENST00000385071 87 ntBASIC-0.44□□□□□ -2.48
H3F3AP84243 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.44□□□□□ -2.48
H3F3AP84243 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.44□□□□□ -2.48
H3F3AP84243 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.44□□□□□ -2.48
H3F3AP84243 MIR1295B-201ENST00000636144 60 ntBASIC-0.44□□□□□ -2.48
H3F3AP84243 SNORA51.10-201ENST00000384418 136 ntBASIC-0.45□□□□□ -2.48
H3F3AP84243 MTCO2P8-201ENST00000412213 658 ntBASIC-0.45□□□□□ -2.48
H3F3AP84243 AC092447.3-201ENST00000426027 686 ntBASIC-0.45□□□□□ -2.48
H3F3AP84243 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.45□□□□□ -2.48
H3F3AP84243 RNU7-102P-201ENST00000458948 62 ntBASIC-0.45□□□□□ -2.48
H3F3AP84243 SNORD4A-201ENST00000459174 72 ntBASIC-0.45□□□□□ -2.48
H3F3AP84243 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.45□□□□□ -2.48
H3F3AP84243 MTND2P14-201ENST00000482139 351 ntBASIC-0.45□□□□□ -2.48
H3F3AP84243 RPL17P19-201ENST00000489069 552 ntBASIC-0.45□□□□□ -2.48
H3F3AP84243 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.45□□□□□ -2.48
H3F3AP84243 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.45□□□□□ -2.48
H3F3AP84243 RNU6-82P-201ENST00000363970 107 ntBASIC-0.46□□□□□ -2.48
H3F3AP84243 Y_RNA.560-201ENST00000384689 102 ntBASIC-0.46□□□□□ -2.48
H3F3AP84243 MIR620-201ENST00000385232 95 ntBASIC-0.46□□□□□ -2.48
H3F3AP84243 RNU6-447P-201ENST00000410293 104 ntBASIC-0.46□□□□□ -2.48
H3F3AP84243 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.46□□□□□ -2.48
H3F3AP84243 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.46□□□□□ -2.48
H3F3AP84243 RNU6-355P-201ENST00000410427 104 ntBASIC-0.46□□□□□ -2.48
H3F3AP84243 RNU6-791P-201ENST00000410467 104 ntBASIC-0.46□□□□□ -2.48
H3F3AP84243 RNU6-705P-201ENST00000410601 104 ntBASIC-0.46□□□□□ -2.48
H3F3AP84243 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.46□□□□□ -2.48
H3F3AP84243 RNU6-860P-201ENST00000410860 104 ntBASIC-0.46□□□□□ -2.48
H3F3AP84243 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.46□□□□□ -2.48
H3F3AP84243 RNU6-785P-201ENST00000411324 104 ntBASIC-0.46□□□□□ -2.48
H3F3AP84243 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-0.46□□□□□ -2.48
H3F3AP84243 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.46□□□□□ -2.48
H3F3AP84243 RNU7-159P-201ENST00000459284 62 ntBASIC-0.46□□□□□ -2.48
H3F3AP84243 TRBVB-201ENST00000477100 408 ntBASIC-0.46□□□□□ -2.48
H3F3AP84243 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.46□□□□□ -2.48
H3F3AP84243 AC116353.2-201ENST00000505332 712 ntBASIC-0.46□□□□□ -2.48
H3F3AP84243 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.46□□□□□ -2.48
H3F3AP84243 AC134698.4-201ENST00000523451 826 ntBASIC-0.46□□□□□ -2.48
H3F3AP84243 MIR4264-201ENST00000583520 66 ntBASIC-0.46□□□□□ -2.48
H3F3AP84243 Z94722.1-201ENST00000604328 474 ntBASIC-0.46□□□□□ -2.48
H3F3AP84243 U6.90-201ENST00000614007 104 ntBASIC-0.46□□□□□ -2.48
H3F3AP84243 AL354950.2-201ENST00000617939 290 ntBASIC-0.46□□□□□ -2.48
H3F3AP84243 U6.70-201ENST00000620287 104 ntBASIC-0.46□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms