Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AL008636.1-201ENST00000625038 1018 ntBASIC0.74□□□□□ -2.29
CBX1P83916 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
CBX1P83916 SNORD12B-201ENST00000410433 91 ntBASIC0.73□□□□□ -2.29
CBX1P83916 RNA5SP511-201ENST00000410487 115 ntBASIC0.73□□□□□ -2.29
CBX1P83916 Y_RNA.621-201ENST00000411065 96 ntBASIC0.73□□□□□ -2.29
CBX1P83916 AC107399.1-201ENST00000451226 265 ntBASIC0.73□□□□□ -2.29
CBX1P83916 RPL7P42-201ENST00000481005 679 ntBASIC0.73□□□□□ -2.29
CBX1P83916 AC092989.1-201ENST00000481235 277 ntBASIC0.73□□□□□ -2.29
CBX1P83916 AC005899.2-201ENST00000584353 90 ntBASIC0.73□□□□□ -2.29
CBX1P83916 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.73□□□□□ -2.29
CBX1P83916 MIR6857-201ENST00000613267 93 ntBASIC0.73□□□□□ -2.29
CBX1P83916 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.73□□□□□ -2.29
CBX1P83916 RNU6-1080P-201ENST00000383982 107 ntBASIC0.72□□□□□ -2.29
CBX1P83916 AL162725.1-201ENST00000435405 301 ntBASIC0.72□□□□□ -2.29
CBX1P83916 RPS20P10-201ENST00000451209 253 ntBASIC0.72□□□□□ -2.29
CBX1P83916 AC105313.1-201ENST00000509121 353 ntBASIC0.72□□□□□ -2.29
CBX1P83916 AP003484.1-201ENST00000530974 250 ntBASIC0.72□□□□□ -2.29
CBX1P83916 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.72□□□□□ -2.29
CBX1P83916 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.72□□□□□ -2.29
CBX1P83916 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.72□□□□□ -2.29
CBX1P83916 AC090517.2-201ENST00000614966 680 ntBASIC0.72□□□□□ -2.29
CBX1P83916 PISRT1.1-201ENST00000616930 107 ntBASIC0.72□□□□□ -2.29
CBX1P83916 AC092794.2-201ENST00000620933 563 ntBASIC0.72□□□□□ -2.29
CBX1P83916 RNU6-1301P-201ENST00000362724 104 ntBASIC0.71□□□□□ -2.3
CBX1P83916 Y_RNA.86-201ENST00000363020 111 ntBASIC0.71□□□□□ -2.3
CBX1P83916 RNA5SP264-201ENST00000363115 107 ntBASIC0.71□□□□□ -2.3
CBX1P83916 U8.5-201ENST00000364528 136 ntBASIC0.71□□□□□ -2.3
CBX1P83916 Y_RNA.330-201ENST00000365230 109 ntBASIC0.71□□□□□ -2.3
CBX1P83916 Y_RNA.361-201ENST00000365515 120 ntBASIC0.71□□□□□ -2.3
CBX1P83916 MIR605-201ENST00000385078 83 ntBASIC0.71□□□□□ -2.3
CBX1P83916 MTND3P8-201ENST00000412909 339 ntBASIC0.71□□□□□ -2.3
CBX1P83916 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.71□□□□□ -2.3
CBX1P83916 AC093019.1-201ENST00000443135 252 ntBASIC0.71□□□□□ -2.3
CBX1P83916 MTND3P10-201ENST00000450967 341 ntBASIC0.71□□□□□ -2.3
CBX1P83916 RNU6-1337P-201ENST00000516525 95 ntBASIC0.71□□□□□ -2.3
CBX1P83916 RNU6-307P-201ENST00000516743 106 ntBASIC0.71□□□□□ -2.3
CBX1P83916 MIR2355-201ENST00000517199 87 ntBASIC0.71□□□□□ -2.3
CBX1P83916 AC023442.1-201ENST00000531247 422 ntBASIC0.71□□□□□ -2.3
CBX1P83916 AC004817.2-201ENST00000561794 651 ntBASIC0.71□□□□□ -2.3
CBX1P83916 AL591926.4-201ENST00000616895 298 ntBASIC0.71□□□□□ -2.3
CBX1P83916 MIR103A2-201ENST00000362154 78 ntBASIC0.7□□□□□ -2.3
CBX1P83916 SNORD115-30-201ENST00000364117 82 ntBASIC0.7□□□□□ -2.3
CBX1P83916 Y_RNA.482-201ENST00000384377 111 ntBASIC0.7□□□□□ -2.3
CBX1P83916 MIR1298-201ENST00000408783 112 ntBASIC0.7□□□□□ -2.3
CBX1P83916 RPL23AP50-201ENST00000434149 455 ntBASIC0.7□□□□□ -2.3
CBX1P83916 AL603825.1-201ENST00000438481 80 ntBASIC0.7□□□□□ -2.3
CBX1P83916 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.7□□□□□ -2.3
CBX1P83916 RPL17P19-201ENST00000489069 552 ntBASIC0.7□□□□□ -2.3
CBX1P83916 RNU6-408P-201ENST00000515910 100 ntBASIC0.7□□□□□ -2.3
CBX1P83916 RNA5SP102-201ENST00000516865 106 ntBASIC0.7□□□□□ -2.3
CBX1P83916 RNU2-12P-201ENST00000517216 168 ntBASIC0.7□□□□□ -2.3
CBX1P83916 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.7□□□□□ -2.3
CBX1P83916 MIR1244-1-201ENST00000612829 85 ntBASIC0.7□□□□□ -2.3
CBX1P83916 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.7□□□□□ -2.3
CBX1P83916 AC004467.1-201ENST00000615678 330 ntBASIC0.7□□□□□ -2.3
CBX1P83916 uc_338.17-201ENST00000619633 179 ntBASIC0.7□□□□□ -2.3
CBX1P83916 MIR1244-3-201ENST00000635744 85 ntBASIC0.7□□□□□ -2.3
CBX1P83916 MIR1244-2-201ENST00000636449 85 ntBASIC0.7□□□□□ -2.3
CBX1P83916 MIR1244-4-202ENST00000636813 85 ntBASIC0.7□□□□□ -2.3
CBX1P83916 Y_RNA.404-201ENST00000383978 102 ntBASIC0.69□□□□□ -2.3
CBX1P83916 RPS26P5-201ENST00000418544 335 ntBASIC0.69□□□□□ -2.3
CBX1P83916 AL589823.1-201ENST00000429577 183 ntBASIC0.69□□□□□ -2.3
CBX1P83916 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.69□□□□□ -2.3
CBX1P83916 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.69□□□□□ -2.3
CBX1P83916 AC117454.1-201ENST00000491120 168 ntBASIC0.69□□□□□ -2.3
CBX1P83916 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.69□□□□□ -2.3
CBX1P83916 MIR4762-201ENST00000585261 75 ntBASIC0.69□□□□□ -2.3
CBX1P83916 AL353765.1-201ENST00000605514 183 ntBASIC0.69□□□□□ -2.3
CBX1P83916 AC007014.2-201ENST00000615581 479 ntBASIC0.69□□□□□ -2.3
CBX1P83916 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.69□□□□□ -2.3
CBX1P83916 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
CBX1P83916 Y_RNA.339-201ENST00000365325 102 ntBASIC0.68□□□□□ -2.3
CBX1P83916 RNU6-1215P-201ENST00000384441 102 ntBASIC0.68□□□□□ -2.3
CBX1P83916 MIR516B2-201ENST00000385190 85 ntBASIC0.68□□□□□ -2.3
CBX1P83916 MIR1277-201ENST00000408536 78 ntBASIC0.68□□□□□ -2.3
CBX1P83916 MIR548F1-201ENST00000408667 84 ntBASIC0.68□□□□□ -2.3
CBX1P83916 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.68□□□□□ -2.3
CBX1P83916 MIR2053-201ENST00000459295 91 ntBASIC0.68□□□□□ -2.3
CBX1P83916 RNU6-718P-201ENST00000516166 105 ntBASIC0.68□□□□□ -2.3
CBX1P83916 SNORA74.3-201ENST00000517108 154 ntBASIC0.68□□□□□ -2.3
CBX1P83916 AC006380.1-201ENST00000603598 186 ntBASIC0.68□□□□□ -2.3
CBX1P83916 AC104465.1-201ENST00000611365 139 ntBASIC0.68□□□□□ -2.3
CBX1P83916 SEPT14P17-201ENST00000617978 177 ntBASIC0.68□□□□□ -2.3
CBX1P83916 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CBX1P83916 SNORA25.9-201ENST00000365087 128 ntBASIC0.67□□□□□ -2.3
CBX1P83916 MIR520C-201ENST00000385005 87 ntBASIC0.67□□□□□ -2.3
CBX1P83916 MIR136-201ENST00000385207 82 ntBASIC0.67□□□□□ -2.3
CBX1P83916 AL035398.1-201ENST00000430869 322 ntBASIC0.67□□□□□ -2.3
CBX1P83916 AL157398.1-201ENST00000452981 186 ntBASIC0.67□□□□□ -2.3
CBX1P83916 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.67□□□□□ -2.3
CBX1P83916 AC116353.2-201ENST00000505332 712 ntBASIC0.67□□□□□ -2.3
CBX1P83916 AF235103.2-201ENST00000525753 346 ntBASIC0.67□□□□□ -2.3
CBX1P83916 AC011604.1-201ENST00000545978 196 ntBASIC0.67□□□□□ -2.3
CBX1P83916 AL078603.1-201ENST00000603824 313 ntBASIC0.67□□□□□ -2.3
CBX1P83916 AL590095.2-201ENST00000604136 117 ntBASIC0.67□□□□□ -2.3
CBX1P83916 Y_RNA.88-201ENST00000363029 99 ntBASIC0.66□□□□□ -2.3
CBX1P83916 SNORD14.1-201ENST00000365609 90 ntBASIC0.66□□□□□ -2.3
CBX1P83916 MIR15B-201ENST00000385045 98 ntBASIC0.66□□□□□ -2.3
CBX1P83916 MIR92A1-201ENST00000385233 78 ntBASIC0.66□□□□□ -2.3
CBX1P83916 AP003716.2-201ENST00000528260 108 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 175.7 ms