Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 Y_RNA.2-201ENST00000362330 96 ntBASIC0.82□□□□□ -2.28
IRX3P78415 RNU6-833P-201ENST00000363486 107 ntBASIC0.82□□□□□ -2.28
IRX3P78415 RNU6-1215P-201ENST00000384441 102 ntBASIC0.82□□□□□ -2.28
IRX3P78415 RNU5A-5P-201ENST00000411054 116 ntBASIC0.82□□□□□ -2.28
IRX3P78415 AC117454.1-201ENST00000491120 168 ntBASIC0.82□□□□□ -2.28
IRX3P78415 SNORA31.2-201ENST00000516019 134 ntBASIC0.82□□□□□ -2.28
IRX3P78415 RNU7-12P-201ENST00000516030 62 ntBASIC0.82□□□□□ -2.28
IRX3P78415 AC005014.2-201ENST00000607795 599 ntBASIC0.82□□□□□ -2.28
IRX3P78415 PISRT1.1-201ENST00000616930 107 ntBASIC0.82□□□□□ -2.28
IRX3P78415 U6.115-201ENST00000636045 103 ntBASIC0.82□□□□□ -2.28
IRX3P78415 RNU6-222P-201ENST00000362438 107 ntBASIC0.81□□□□□ -2.28
IRX3P78415 RNU6-1059P-201ENST00000363752 98 ntBASIC0.81□□□□□ -2.28
IRX3P78415 RNU6-879P-201ENST00000364328 108 ntBASIC0.81□□□□□ -2.28
IRX3P78415 Y_RNA.243-201ENST00000364481 109 ntBASIC0.81□□□□□ -2.28
IRX3P78415 SNORD114-24-201ENST00000365029 72 ntBASIC0.81□□□□□ -2.28
IRX3P78415 RNU6-407P-201ENST00000365280 104 ntBASIC0.81□□□□□ -2.28
IRX3P78415 Y_RNA.516-201ENST00000384541 124 ntBASIC0.81□□□□□ -2.28
IRX3P78415 Y_RNA.557-201ENST00000384680 107 ntBASIC0.81□□□□□ -2.28
IRX3P78415 MIR193B-201ENST00000384907 83 ntBASIC0.81□□□□□ -2.28
IRX3P78415 MIR936-201ENST00000401264 98 ntBASIC0.81□□□□□ -2.28
IRX3P78415 Y_RNA.594-201ENST00000410373 140 ntBASIC0.81□□□□□ -2.28
IRX3P78415 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.81□□□□□ -2.28
IRX3P78415 LINC01399-202ENST00000458450 244 ntBASIC0.81□□□□□ -2.28
IRX3P78415 RNU6-625P-201ENST00000459412 107 ntBASIC0.81□□□□□ -2.28
IRX3P78415 AL049830.1-201ENST00000468034 425 ntBASIC0.81□□□□□ -2.28
IRX3P78415 AC018710.1-201ENST00000506509 158 ntBASIC0.81□□□□□ -2.28
IRX3P78415 RNU6-922P-201ENST00000516753 99 ntBASIC0.81□□□□□ -2.28
IRX3P78415 AC004812.1-201ENST00000540773 146 ntBASIC0.81□□□□□ -2.28
IRX3P78415 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
IRX3P78415 Y_RNA.267-201ENST00000364679 109 ntBASIC0.8□□□□□ -2.28
IRX3P78415 SNORD115-47-201ENST00000391226 86 ntBASIC0.8□□□□□ -2.28
IRX3P78415 U8.16-201ENST00000391279 133 ntBASIC0.8□□□□□ -2.28
IRX3P78415 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.8□□□□□ -2.28
IRX3P78415 RNU6-733P-201ENST00000410759 104 ntBASIC0.8□□□□□ -2.28
IRX3P78415 AC063976.4-201ENST00000421971 163 ntBASIC0.8□□□□□ -2.28
IRX3P78415 AC005534.2-201ENST00000431047 433 ntBASIC0.8□□□□□ -2.28
IRX3P78415 RNU7-87P-201ENST00000459343 62 ntBASIC0.8□□□□□ -2.28
IRX3P78415 AC091021.1-201ENST00000468051 388 ntBASIC0.8□□□□□ -2.28
IRX3P78415 RPL17P19-201ENST00000489069 552 ntBASIC0.8□□□□□ -2.28
IRX3P78415 AC027419.1-201ENST00000522976 328 ntBASIC0.8□□□□□ -2.28
IRX3P78415 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.8□□□□□ -2.28
IRX3P78415 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.8□□□□□ -2.28
IRX3P78415 AC106754.2-201ENST00000623006 233 ntBASIC0.8□□□□□ -2.28
IRX3P78415 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
IRX3P78415 SNORA1B-201ENST00000362535 133 ntBASIC0.79□□□□□ -2.28
IRX3P78415 RNU6-117P-201ENST00000365415 107 ntBASIC0.79□□□□□ -2.28
IRX3P78415 RNU6-601P-201ENST00000384540 107 ntBASIC0.79□□□□□ -2.28
IRX3P78415 SNORD41-201ENST00000386967 70 ntBASIC0.79□□□□□ -2.28
IRX3P78415 RNU6-910P-201ENST00000390844 107 ntBASIC0.79□□□□□ -2.28
IRX3P78415 MIR891A-201ENST00000401237 79 ntBASIC0.79□□□□□ -2.28
IRX3P78415 CALM2P4-201ENST00000430810 426 ntBASIC0.79□□□□□ -2.28
IRX3P78415 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.79□□□□□ -2.28
IRX3P78415 CYCTP-201ENST00000504253 315 ntBASIC0.79□□□□□ -2.28
IRX3P78415 SNORD79.1-201ENST00000516069 84 ntBASIC0.79□□□□□ -2.28
IRX3P78415 AC022616.4-201ENST00000522985 181 ntBASIC0.79□□□□□ -2.28
IRX3P78415 MIR4778-201ENST00000577635 80 ntBASIC0.79□□□□□ -2.28
IRX3P78415 AC092794.2-201ENST00000620933 563 ntBASIC0.79□□□□□ -2.28
IRX3P78415 RNA5SP347-201ENST00000362445 119 ntBASIC0.78□□□□□ -2.28
IRX3P78415 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.78□□□□□ -2.28
IRX3P78415 MTND5P15-201ENST00000434246 349 ntBASIC0.78□□□□□ -2.28
IRX3P78415 RPS3AP52-201ENST00000435639 297 ntBASIC0.78□□□□□ -2.28
IRX3P78415 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.78□□□□□ -2.28
IRX3P78415 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.78□□□□□ -2.28
IRX3P78415 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.78□□□□□ -2.28
IRX3P78415 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.78□□□□□ -2.28
IRX3P78415 Y_RNA.48-201ENST00000362710 103 ntBASIC0.77□□□□□ -2.29
IRX3P78415 Y_RNA.86-201ENST00000363020 111 ntBASIC0.77□□□□□ -2.29
IRX3P78415 SNORD114-23-201ENST00000363536 72 ntBASIC0.77□□□□□ -2.29
IRX3P78415 RNU4-40P-201ENST00000364351 143 ntBASIC0.77□□□□□ -2.29
IRX3P78415 Y_RNA.318-201ENST00000365131 97 ntBASIC0.77□□□□□ -2.29
IRX3P78415 Y_RNA.339-201ENST00000365325 102 ntBASIC0.77□□□□□ -2.29
IRX3P78415 Y_RNA.361-201ENST00000365515 120 ntBASIC0.77□□□□□ -2.29
IRX3P78415 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.77□□□□□ -2.29
IRX3P78415 AC114482.1-201ENST00000418010 247 ntBASIC0.77□□□□□ -2.29
IRX3P78415 AC093019.1-201ENST00000443135 252 ntBASIC0.77□□□□□ -2.29
IRX3P78415 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.77□□□□□ -2.29
IRX3P78415 AC048334.1-201ENST00000477975 159 ntBASIC0.77□□□□□ -2.29
IRX3P78415 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.77□□□□□ -2.29
IRX3P78415 SNORA40.9-201ENST00000515895 93 ntBASIC0.77□□□□□ -2.29
IRX3P78415 RNU6-917P-201ENST00000516294 104 ntBASIC0.77□□□□□ -2.29
IRX3P78415 AC022868.1-201ENST00000517767 391 ntBASIC0.77□□□□□ -2.29
IRX3P78415 AC004817.2-201ENST00000561794 651 ntBASIC0.77□□□□□ -2.29
IRX3P78415 MIR1273G-201ENST00000577677 100 ntBASIC0.77□□□□□ -2.29
IRX3P78415 AC004832.4-201ENST00000608952 331 ntBASIC0.77□□□□□ -2.29
IRX3P78415 AC025253.1-201ENST00000613623 543 ntBASIC0.77□□□□□ -2.29
IRX3P78415 CASC19-280ENST00000642102 1351 ntBASIC0.77□□□□□ -2.29
IRX3P78415 MIRLET7C-201ENST00000362160 84 ntBASIC0.76□□□□□ -2.29
IRX3P78415 MIR608-201ENST00000384820 100 ntBASIC0.76□□□□□ -2.29
IRX3P78415 MIR452-201ENST00000385020 85 ntBASIC0.76□□□□□ -2.29
IRX3P78415 MIR15B-201ENST00000385045 98 ntBASIC0.76□□□□□ -2.29
IRX3P78415 AC002429.1-201ENST00000437672 148 ntBASIC0.76□□□□□ -2.29
IRX3P78415 AC092989.1-201ENST00000481235 277 ntBASIC0.76□□□□□ -2.29
IRX3P78415 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.76□□□□□ -2.29
IRX3P78415 AC011352.1-201ENST00000512300 793 ntBASIC0.76□□□□□ -2.29
IRX3P78415 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.76□□□□□ -2.29
IRX3P78415 RNU6-358P-201ENST00000516564 75 ntBASIC0.76□□□□□ -2.29
IRX3P78415 AC060780.3-201ENST00000589464 80 ntBASIC0.76□□□□□ -2.29
IRX3P78415 AC068790.6-201ENST00000602558 258 ntBASIC0.76□□□□□ -2.29
IRX3P78415 AC006380.1-201ENST00000603598 186 ntBASIC0.76□□□□□ -2.29
IRX3P78415 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms