Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 SNORA44.1-201ENST00000517031 108 ntBASIC1.37□□□□□ -2.19
PEX3P56589 AC015688.6-201ENST00000577737 104 ntBASIC1.37□□□□□ -2.19
PEX3P56589 AL929325.1-201ENST00000603096 117 ntBASIC1.37□□□□□ -2.19
PEX3P56589 AL359821.1-201ENST00000605519 182 ntBASIC1.37□□□□□ -2.19
PEX3P56589 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.37□□□□□ -2.19
PEX3P56589 MIR6079-201ENST00000635807 62 ntBASIC1.37□□□□□ -2.19
PEX3P56589 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
PEX3P56589 AC005592.1-201ENST00000566527 1640 ntBASIC1.37□□□□□ -2.19
PEX3P56589 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.36□□□□□ -2.19
PEX3P56589 Y_RNA.28-201ENST00000362554 111 ntBASIC1.36□□□□□ -2.19
PEX3P56589 RNU6-414P-201ENST00000363705 104 ntBASIC1.36□□□□□ -2.19
PEX3P56589 Y_RNA.813-201ENST00000364639 102 ntBASIC1.36□□□□□ -2.19
PEX3P56589 Y_RNA.327-201ENST00000365201 102 ntBASIC1.36□□□□□ -2.19
PEX3P56589 RNU6-407P-201ENST00000365280 104 ntBASIC1.36□□□□□ -2.19
PEX3P56589 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.36□□□□□ -2.19
PEX3P56589 Y_RNA.445-201ENST00000384168 102 ntBASIC1.36□□□□□ -2.19
PEX3P56589 RNU6-1031P-201ENST00000384773 107 ntBASIC1.36□□□□□ -2.19
PEX3P56589 MRPL42P3-201ENST00000401492 326 ntBASIC1.36□□□□□ -2.19
PEX3P56589 RNU6-955P-201ENST00000410497 104 ntBASIC1.36□□□□□ -2.19
PEX3P56589 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.36□□□□□ -2.19
PEX3P56589 MTND1P14-201ENST00000427400 950 ntBASIC1.36□□□□□ -2.19
PEX3P56589 FTH1P12-201ENST00000432137 551 ntBASIC1.36□□□□□ -2.19
PEX3P56589 MTCYBP6-201ENST00000441810 138 ntBASIC1.36□□□□□ -2.19
PEX3P56589 HSPE1P13-201ENST00000451143 297 ntBASIC1.36□□□□□ -2.19
PEX3P56589 Y_RNA.631-201ENST00000459607 101 ntBASIC1.36□□□□□ -2.19
PEX3P56589 RPL36AP21-201ENST00000490372 323 ntBASIC1.36□□□□□ -2.19
PEX3P56589 Y_RNA.711-201ENST00000516993 102 ntBASIC1.36□□□□□ -2.19
PEX3P56589 AC040926.1-201ENST00000530195 238 ntBASIC1.36□□□□□ -2.19
PEX3P56589 MIR4709-201ENST00000577272 72 ntBASIC1.36□□□□□ -2.19
PEX3P56589 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.36□□□□□ -2.19
PEX3P56589 AC021506.2-201ENST00000612354 169 ntBASIC1.36□□□□□ -2.19
PEX3P56589 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
PEX3P56589 AC134503.1-201ENST00000633048 54 ntBASIC1.36□□□□□ -2.19
PEX3P56589 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.35□□□□□ -2.19
PEX3P56589 Y_RNA.462-201ENST00000384268 102 ntBASIC1.35□□□□□ -2.19
PEX3P56589 MIR1267-201ENST00000408723 78 ntBASIC1.35□□□□□ -2.19
PEX3P56589 AL354751.2-201ENST00000415471 210 ntBASIC1.35□□□□□ -2.19
PEX3P56589 RNU7-94P-201ENST00000459576 63 ntBASIC1.35□□□□□ -2.19
PEX3P56589 AC091021.1-201ENST00000468051 388 ntBASIC1.35□□□□□ -2.19
PEX3P56589 AC005840.1-201ENST00000498412 377 ntBASIC1.35□□□□□ -2.19
PEX3P56589 RNU6-436P-201ENST00000516171 114 ntBASIC1.35□□□□□ -2.19
PEX3P56589 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.35□□□□□ -2.19
PEX3P56589 AC020661.2-201ENST00000560114 134 ntBASIC1.35□□□□□ -2.19
PEX3P56589 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.35□□□□□ -2.19
PEX3P56589 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.34□□□□□ -2.19
PEX3P56589 SNORD81.1-201ENST00000363064 77 ntBASIC1.34□□□□□ -2.19
PEX3P56589 Y_RNA.128-201ENST00000363391 112 ntBASIC1.34□□□□□ -2.19
PEX3P56589 RNU6-1175P-201ENST00000365200 107 ntBASIC1.34□□□□□ -2.19
PEX3P56589 SNORD63-201ENST00000384262 68 ntBASIC1.34□□□□□ -2.19
PEX3P56589 RNU6-505P-201ENST00000384427 107 ntBASIC1.34□□□□□ -2.19
PEX3P56589 Y_RNA.526-201ENST00000384572 110 ntBASIC1.34□□□□□ -2.19
PEX3P56589 RNU6-440P-201ENST00000390882 105 ntBASIC1.34□□□□□ -2.19
PEX3P56589 RNU6-321P-201ENST00000410912 106 ntBASIC1.34□□□□□ -2.19
PEX3P56589 AC010154.1-201ENST00000425857 269 ntBASIC1.34□□□□□ -2.19
PEX3P56589 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.34□□□□□ -2.19
PEX3P56589 AC010655.3-201ENST00000478818 450 ntBASIC1.34□□□□□ -2.19
PEX3P56589 RNU6-1053P-201ENST00000515930 101 ntBASIC1.34□□□□□ -2.19
PEX3P56589 RNU6-341P-201ENST00000516973 96 ntBASIC1.34□□□□□ -2.19
PEX3P56589 AC104695.3-201ENST00000604052 296 ntBASIC1.34□□□□□ -2.19
PEX3P56589 PRR13P7-201ENST00000605538 430 ntBASIC1.34□□□□□ -2.19
PEX3P56589 AC100821.1-201ENST00000523153 2479 ntBASIC1.34□□□□□ -2.2
PEX3P56589 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.33□□□□□ -2.2
PEX3P56589 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
PEX3P56589 RNU4-50P-201ENST00000364361 141 ntBASIC1.33□□□□□ -2.2
PEX3P56589 SNORD14.1-201ENST00000365609 90 ntBASIC1.33□□□□□ -2.2
PEX3P56589 RNU6-950P-201ENST00000384651 107 ntBASIC1.33□□□□□ -2.2
PEX3P56589 MIR548P-201ENST00000408336 84 ntBASIC1.33□□□□□ -2.2
PEX3P56589 COX6CP10-201ENST00000416832 224 ntBASIC1.33□□□□□ -2.2
PEX3P56589 SNORA25.10-201ENST00000515926 124 ntBASIC1.33□□□□□ -2.2
PEX3P56589 RNU6-155P-201ENST00000516347 100 ntBASIC1.33□□□□□ -2.2
PEX3P56589 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.33□□□□□ -2.2
PEX3P56589 AC090821.2-201ENST00000523552 176 ntBASIC1.33□□□□□ -2.2
PEX3P56589 AC136932.1-201ENST00000574771 208 ntBASIC1.33□□□□□ -2.2
PEX3P56589 Y_RNA.772-201ENST00000606692 102 ntBASIC1.33□□□□□ -2.2
PEX3P56589 AC127459.3-201ENST00000624328 466 ntBASIC1.33□□□□□ -2.2
PEX3P56589 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
PEX3P56589 RNU6-1123P-201ENST00000362347 106 ntBASIC1.32□□□□□ -2.2
PEX3P56589 Y_RNA.172-201ENST00000363765 102 ntBASIC1.32□□□□□ -2.2
PEX3P56589 SNORA22B-201ENST00000383876 138 ntBASIC1.32□□□□□ -2.2
PEX3P56589 SNORD116-13-201ENST00000384408 92 ntBASIC1.32□□□□□ -2.2
PEX3P56589 Y_RNA.551-201ENST00000384661 102 ntBASIC1.32□□□□□ -2.2
PEX3P56589 RNU6-823P-201ENST00000391042 103 ntBASIC1.32□□□□□ -2.2
PEX3P56589 snoU13.9-201ENST00000458927 103 ntBASIC1.32□□□□□ -2.2
PEX3P56589 U8.20-201ENST00000459445 131 ntBASIC1.32□□□□□ -2.2
PEX3P56589 TRMT112P2-201ENST00000512910 132 ntBASIC1.32□□□□□ -2.2
PEX3P56589 RNU6-1278P-201ENST00000516130 107 ntBASIC1.32□□□□□ -2.2
PEX3P56589 RNU6-1337P-201ENST00000516525 95 ntBASIC1.32□□□□□ -2.2
PEX3P56589 RNU6-63P-201ENST00000516690 95 ntBASIC1.32□□□□□ -2.2
PEX3P56589 AC008269.2-201ENST00000561915 1105 ntBASIC1.32□□□□□ -2.2
PEX3P56589 RPS29P30-201ENST00000600975 111 ntBASIC1.32□□□□□ -2.2
PEX3P56589 MIR6078-201ENST00000611069 100 ntBASIC1.32□□□□□ -2.2
PEX3P56589 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.32□□□□□ -2.2
PEX3P56589 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.32□□□□□ -2.2
PEX3P56589 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
PEX3P56589 SNORA1B-201ENST00000362535 133 ntBASIC1.31□□□□□ -2.2
PEX3P56589 RNU6-53P-201ENST00000365367 106 ntBASIC1.31□□□□□ -2.2
PEX3P56589 Y_RNA.471-201ENST00000384312 102 ntBASIC1.31□□□□□ -2.2
PEX3P56589 AL162725.1-201ENST00000435405 301 ntBASIC1.31□□□□□ -2.2
PEX3P56589 AC005042.3-201ENST00000453230 174 ntBASIC1.31□□□□□ -2.2
PEX3P56589 RNU7-34P-201ENST00000459394 64 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms