Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL442163.3-201ENST00000554110 156 ntBASIC1.29□□□□□ -2.2
VCPP55072 AC015688.6-201ENST00000577737 104 ntBASIC1.29□□□□□ -2.2
VCPP55072 AC073413.2-201ENST00000604332 360 ntBASIC1.29□□□□□ -2.2
VCPP55072 AC084781.2-201ENST00000615568 161 ntBASIC1.29□□□□□ -2.2
VCPP55072 U6.115-201ENST00000636045 103 ntBASIC1.29□□□□□ -2.2
VCPP55072 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
VCPP55072 SNORA27.1-201ENST00000362604 124 ntBASIC1.28□□□□□ -2.2
VCPP55072 Y_RNA.70-201ENST00000362886 110 ntBASIC1.28□□□□□ -2.2
VCPP55072 RNU6-454P-201ENST00000364292 107 ntBASIC1.28□□□□□ -2.2
VCPP55072 Y_RNA.314-201ENST00000365114 102 ntBASIC1.28□□□□□ -2.2
VCPP55072 RNU6-1310P-201ENST00000384153 107 ntBASIC1.28□□□□□ -2.2
VCPP55072 RNU6-1031P-201ENST00000384773 107 ntBASIC1.28□□□□□ -2.2
VCPP55072 RNU6-440P-201ENST00000390882 105 ntBASIC1.28□□□□□ -2.2
VCPP55072 RN7SKP200-201ENST00000410564 320 ntBASIC1.28□□□□□ -2.2
VCPP55072 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.28□□□□□ -2.2
VCPP55072 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.28□□□□□ -2.2
VCPP55072 AC099799.1-201ENST00000439809 192 ntBASIC1.28□□□□□ -2.2
VCPP55072 Y_RNA.632-201ENST00000459189 102 ntBASIC1.28□□□□□ -2.2
VCPP55072 AC097462.1-201ENST00000514125 324 ntBASIC1.28□□□□□ -2.2
VCPP55072 RNU6-408P-201ENST00000515910 100 ntBASIC1.28□□□□□ -2.2
VCPP55072 RNA5SP20-201ENST00000515976 84 ntBASIC1.28□□□□□ -2.2
VCPP55072 RNU6-507P-201ENST00000516045 100 ntBASIC1.28□□□□□ -2.2
VCPP55072 RNU6-113P-201ENST00000516653 101 ntBASIC1.28□□□□□ -2.2
VCPP55072 RNU7-172P-201ENST00000517125 64 ntBASIC1.28□□□□□ -2.2
VCPP55072 AC021506.2-201ENST00000612354 169 ntBASIC1.28□□□□□ -2.2
VCPP55072 AC091812.1-201ENST00000432235 1948 ntBASIC1.28□□□□□ -2.2
VCPP55072 AC018630.2-201ENST00000534866 2403 ntBASIC1.28□□□□□ -2.2
VCPP55072 Y_RNA.263-201ENST00000364659 114 ntBASIC1.27□□□□□ -2.21
VCPP55072 SNORA25.8-201ENST00000364831 128 ntBASIC1.27□□□□□ -2.21
VCPP55072 RNU6-407P-201ENST00000365280 104 ntBASIC1.27□□□□□ -2.21
VCPP55072 Y_RNA.356-201ENST00000365475 113 ntBASIC1.27□□□□□ -2.21
VCPP55072 RNU6-1040P-201ENST00000383974 107 ntBASIC1.27□□□□□ -2.21
VCPP55072 RNU6-926P-201ENST00000384075 107 ntBASIC1.27□□□□□ -2.21
VCPP55072 Y_RNA.529-201ENST00000384586 119 ntBASIC1.27□□□□□ -2.21
VCPP55072 MIR618-201ENST00000385287 98 ntBASIC1.27□□□□□ -2.21
VCPP55072 MTCO2P27-201ENST00000420740 428 ntBASIC1.27□□□□□ -2.21
VCPP55072 AC018865.2-201ENST00000423631 129 ntBASIC1.27□□□□□ -2.21
VCPP55072 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.27□□□□□ -2.21
VCPP55072 Y_RNA.702-201ENST00000516843 96 ntBASIC1.27□□□□□ -2.21
VCPP55072 RNU6-699P-201ENST00000517081 110 ntBASIC1.27□□□□□ -2.21
VCPP55072 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.26□□□□□ -2.21
VCPP55072 RNU6-961P-201ENST00000363893 105 ntBASIC1.26□□□□□ -2.21
VCPP55072 RNY3P14-201ENST00000384309 102 ntBASIC1.26□□□□□ -2.21
VCPP55072 RNY3P4-201ENST00000384428 101 ntBASIC1.26□□□□□ -2.21
VCPP55072 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.26□□□□□ -2.21
VCPP55072 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.26□□□□□ -2.21
VCPP55072 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.26□□□□□ -2.21
VCPP55072 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.26□□□□□ -2.21
VCPP55072 RPL21P9-201ENST00000556149 474 ntBASIC1.26□□□□□ -2.21
VCPP55072 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.26□□□□□ -2.21
VCPP55072 AL390123.1-201ENST00000603216 237 ntBASIC1.26□□□□□ -2.21
VCPP55072 AC005828.6-201ENST00000606610 232 ntBASIC1.26□□□□□ -2.21
VCPP55072 U2.1-201ENST00000618978 145 ntBASIC1.26□□□□□ -2.21
VCPP55072 AC138305.3-201ENST00000624988 240 ntBASIC1.26□□□□□ -2.21
VCPP55072 MIR6079-201ENST00000635807 62 ntBASIC1.26□□□□□ -2.21
VCPP55072 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
VCPP55072 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
VCPP55072 RNU6-1123P-201ENST00000362347 106 ntBASIC1.25□□□□□ -2.21
VCPP55072 Y_RNA.187-201ENST00000363918 113 ntBASIC1.25□□□□□ -2.21
VCPP55072 Y_RNA.243-201ENST00000364481 109 ntBASIC1.25□□□□□ -2.21
VCPP55072 MIR513A1-201ENST00000385138 129 ntBASIC1.25□□□□□ -2.21
VCPP55072 RNU11-5P-201ENST00000391216 129 ntBASIC1.25□□□□□ -2.21
VCPP55072 MIR873-201ENST00000401120 77 ntBASIC1.25□□□□□ -2.21
VCPP55072 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.25□□□□□ -2.21
VCPP55072 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.25□□□□□ -2.21
VCPP55072 FCF1P4-201ENST00000448326 183 ntBASIC1.25□□□□□ -2.21
VCPP55072 SUMO1P2-201ENST00000452524 304 ntBASIC1.25□□□□□ -2.21
VCPP55072 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.25□□□□□ -2.21
VCPP55072 RNU7-152P-201ENST00000458982 64 ntBASIC1.25□□□□□ -2.21
VCPP55072 SNORD19B-201ENST00000459623 84 ntBASIC1.25□□□□□ -2.21
VCPP55072 RPS23P4-201ENST00000487908 423 ntBASIC1.25□□□□□ -2.21
VCPP55072 RNU6-911P-201ENST00000516523 104 ntBASIC1.25□□□□□ -2.21
VCPP55072 RNA5SP476-201ENST00000516613 103 ntBASIC1.25□□□□□ -2.21
VCPP55072 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.25□□□□□ -2.21
VCPP55072 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.25□□□□□ -2.21
VCPP55072 CYP3A52P-201ENST00000563326 91 ntBASIC1.25□□□□□ -2.21
VCPP55072 AC004467.1-201ENST00000615678 330 ntBASIC1.25□□□□□ -2.21
VCPP55072 RNA5SP327-201ENST00000362494 101 ntBASIC1.24□□□□□ -2.21
VCPP55072 RNU1-133P-201ENST00000364867 167 ntBASIC1.24□□□□□ -2.21
VCPP55072 Y_RNA.463-201ENST00000384271 102 ntBASIC1.24□□□□□ -2.21
VCPP55072 RNU6-1065P-201ENST00000384513 106 ntBASIC1.24□□□□□ -2.21
VCPP55072 MIR193B-201ENST00000384907 83 ntBASIC1.24□□□□□ -2.21
VCPP55072 MIR628-201ENST00000385229 95 ntBASIC1.24□□□□□ -2.21
VCPP55072 AL034345.1-201ENST00000407768 123 ntBASIC1.24□□□□□ -2.21
VCPP55072 AC096644.2-201ENST00000429278 159 ntBASIC1.24□□□□□ -2.21
VCPP55072 AL137792.2-201ENST00000443484 235 ntBASIC1.24□□□□□ -2.21
VCPP55072 RN7SKP179-201ENST00000516126 217 ntBASIC1.24□□□□□ -2.21
VCPP55072 AC023442.1-201ENST00000531247 422 ntBASIC1.24□□□□□ -2.21
VCPP55072 RAB11AP2-201ENST00000545905 639 ntBASIC1.24□□□□□ -2.21
VCPP55072 AC093027.1-201ENST00000546698 429 ntBASIC1.24□□□□□ -2.21
VCPP55072 AL162424.1-201ENST00000602325 221 ntBASIC1.24□□□□□ -2.21
VCPP55072 AL050343.2-201ENST00000607338 280 ntBASIC1.24□□□□□ -2.21
VCPP55072 AL021879.1-201ENST00000611756 288 ntBASIC1.24□□□□□ -2.21
VCPP55072 AC112487.2-201ENST00000637950 304 ntBASIC1.24□□□□□ -2.21
VCPP55072 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.23□□□□□ -2.21
VCPP55072 Y_RNA.124-201ENST00000363339 93 ntBASIC1.23□□□□□ -2.21
VCPP55072 RNA5SP259-201ENST00000365541 109 ntBASIC1.23□□□□□ -2.21
VCPP55072 Y_RNA.428-201ENST00000384078 102 ntBASIC1.23□□□□□ -2.21
VCPP55072 SNORA70.7-201ENST00000384159 133 ntBASIC1.23□□□□□ -2.21
VCPP55072 SNORA12.1-201ENST00000390873 148 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms