Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 RNU6-1088P-201ENST00000516850 104 ntBASIC0.62□□□□□ -2.31
ACLYP53396 RNU1-54P-201ENST00000517181 120 ntBASIC0.62□□□□□ -2.31
ACLYP53396 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.62□□□□□ -2.31
ACLYP53396 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.62□□□□□ -2.31
ACLYP53396 AC004817.2-201ENST00000561794 651 ntBASIC0.62□□□□□ -2.31
ACLYP53396 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.62□□□□□ -2.31
ACLYP53396 AC120024.3-201ENST00000603167 156 ntBASIC0.62□□□□□ -2.31
ACLYP53396 U6.115-201ENST00000636045 103 ntBASIC0.62□□□□□ -2.31
ACLYP53396 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
ACLYP53396 MIR410-201ENST00000362222 80 ntBASIC0.61□□□□□ -2.31
ACLYP53396 RNU4-12P-201ENST00000365233 139 ntBASIC0.61□□□□□ -2.31
ACLYP53396 RNU6-716P-201ENST00000365621 103 ntBASIC0.61□□□□□ -2.31
ACLYP53396 RNU6-1145P-201ENST00000384246 107 ntBASIC0.61□□□□□ -2.31
ACLYP53396 AL035398.1-201ENST00000430869 322 ntBASIC0.61□□□□□ -2.31
ACLYP53396 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.61□□□□□ -2.31
ACLYP53396 AC074133.1-201ENST00000515696 183 ntBASIC0.61□□□□□ -2.31
ACLYP53396 RNU6-506P-201ENST00000516553 94 ntBASIC0.61□□□□□ -2.31
ACLYP53396 RNU6-314P-201ENST00000516574 104 ntBASIC0.61□□□□□ -2.31
ACLYP53396 AC109635.3-201ENST00000529536 185 ntBASIC0.61□□□□□ -2.31
ACLYP53396 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.61□□□□□ -2.31
ACLYP53396 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.61□□□□□ -2.31
ACLYP53396 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.61□□□□□ -2.31
ACLYP53396 AC012557.2-201ENST00000605919 418 ntBASIC0.61□□□□□ -2.31
ACLYP53396 AF250324.2-201ENST00000608299 610 ntBASIC0.61□□□□□ -2.31
ACLYP53396 AC104260.1-201ENST00000616660 539 ntBASIC0.61□□□□□ -2.31
ACLYP53396 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.61□□□□□ -2.31
ACLYP53396 AC027279.3-201ENST00000625055 122 ntBASIC0.61□□□□□ -2.31
ACLYP53396 MIR5087-201ENST00000635826 76 ntBASIC0.61□□□□□ -2.31
ACLYP53396 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
ACLYP53396 Y_RNA.41-201ENST00000362646 102 ntBASIC0.6□□□□□ -2.31
ACLYP53396 Y_RNA.85-201ENST00000363014 111 ntBASIC0.6□□□□□ -2.31
ACLYP53396 RNA5SP264-201ENST00000363115 107 ntBASIC0.6□□□□□ -2.31
ACLYP53396 RNU6-163P-201ENST00000384396 106 ntBASIC0.6□□□□□ -2.31
ACLYP53396 RNU6-110P-201ENST00000384508 104 ntBASIC0.6□□□□□ -2.31
ACLYP53396 Y_RNA.559-201ENST00000384686 107 ntBASIC0.6□□□□□ -2.31
ACLYP53396 MIR190B-201ENST00000401119 79 ntBASIC0.6□□□□□ -2.31
ACLYP53396 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.6□□□□□ -2.31
ACLYP53396 MTND1P17-201ENST00000448961 204 ntBASIC0.6□□□□□ -2.31
ACLYP53396 SUMO1P2-201ENST00000452524 304 ntBASIC0.6□□□□□ -2.31
ACLYP53396 SNORD5.1-201ENST00000458800 75 ntBASIC0.6□□□□□ -2.31
ACLYP53396 COX6CP6-201ENST00000490840 228 ntBASIC0.6□□□□□ -2.31
ACLYP53396 RNU6-1314P-201ENST00000517139 104 ntBASIC0.6□□□□□ -2.31
ACLYP53396 AC018448.1-201ENST00000552843 316 ntBASIC0.6□□□□□ -2.31
ACLYP53396 MIR5701-3-201ENST00000578890 82 ntBASIC0.6□□□□□ -2.31
ACLYP53396 MIR5701-1-201ENST00000585138 82 ntBASIC0.6□□□□□ -2.31
ACLYP53396 AC005828.6-201ENST00000606610 232 ntBASIC0.6□□□□□ -2.31
ACLYP53396 MIR5701-2-201ENST00000615634 82 ntBASIC0.6□□□□□ -2.31
ACLYP53396 AL008636.1-201ENST00000625038 1018 ntBASIC0.6□□□□□ -2.31
ACLYP53396 AC023934.1-201ENST00000574529 2389 ntBASIC0.59□□□□□ -2.31
ACLYP53396 Y_RNA.330-201ENST00000365230 109 ntBASIC0.59□□□□□ -2.31
ACLYP53396 RNU6-831P-201ENST00000384548 107 ntBASIC0.59□□□□□ -2.31
ACLYP53396 MIR452-201ENST00000385020 85 ntBASIC0.59□□□□□ -2.31
ACLYP53396 MIR1197-201ENST00000408818 88 ntBASIC0.59□□□□□ -2.31
ACLYP53396 RNU6-1148P-201ENST00000410992 104 ntBASIC0.59□□□□□ -2.31
ACLYP53396 MTND3P21-201ENST00000433774 331 ntBASIC0.59□□□□□ -2.31
ACLYP53396 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.59□□□□□ -2.31
ACLYP53396 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.59□□□□□ -2.31
ACLYP53396 AC093019.1-201ENST00000443135 252 ntBASIC0.59□□□□□ -2.31
ACLYP53396 RNA5SP121-201ENST00000516537 101 ntBASIC0.59□□□□□ -2.31
ACLYP53396 RNU6-566P-201ENST00000516790 107 ntBASIC0.59□□□□□ -2.31
ACLYP53396 MIR6128-201ENST00000615528 109 ntBASIC0.59□□□□□ -2.31
ACLYP53396 MIR103A2-201ENST00000362154 78 ntBASIC0.58□□□□□ -2.32
ACLYP53396 RNU6-1335P-201ENST00000365426 107 ntBASIC0.58□□□□□ -2.32
ACLYP53396 Y_RNA.364-201ENST00000365532 101 ntBASIC0.58□□□□□ -2.32
ACLYP53396 RNU6-1013P-201ENST00000384180 107 ntBASIC0.58□□□□□ -2.32
ACLYP53396 Y_RNA.498-201ENST00000384460 102 ntBASIC0.58□□□□□ -2.32
ACLYP53396 AC009161.1-201ENST00000417306 376 ntBASIC0.58□□□□□ -2.32
ACLYP53396 PIGPP3-201ENST00000425307 415 ntBASIC0.58□□□□□ -2.32
ACLYP53396 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.58□□□□□ -2.32
ACLYP53396 RPS20P10-201ENST00000451209 253 ntBASIC0.58□□□□□ -2.32
ACLYP53396 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.58□□□□□ -2.32
ACLYP53396 Y_RNA.681-201ENST00000516445 113 ntBASIC0.58□□□□□ -2.32
ACLYP53396 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.58□□□□□ -2.32
ACLYP53396 AC103591.3-201ENST00000608684 209 ntBASIC0.58□□□□□ -2.32
ACLYP53396 AC007014.2-201ENST00000615581 479 ntBASIC0.58□□□□□ -2.32
ACLYP53396 MIR3662-201ENST00000637030 95 ntBASIC0.58□□□□□ -2.32
ACLYP53396 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
ACLYP53396 RNA5SP257-201ENST00000363023 116 ntBASIC0.57□□□□□ -2.32
ACLYP53396 RNU6-454P-201ENST00000364292 107 ntBASIC0.57□□□□□ -2.32
ACLYP53396 RNU6-879P-201ENST00000364328 108 ntBASIC0.57□□□□□ -2.32
ACLYP53396 Y_RNA.402-201ENST00000383972 102 ntBASIC0.57□□□□□ -2.32
ACLYP53396 RNU6-136P-201ENST00000384663 107 ntBASIC0.57□□□□□ -2.32
ACLYP53396 RNA5SP511-201ENST00000410487 115 ntBASIC0.57□□□□□ -2.32
ACLYP53396 UBE2V1P7-201ENST00000446395 340 ntBASIC0.57□□□□□ -2.32
ACLYP53396 RNU6-625P-201ENST00000459412 107 ntBASIC0.57□□□□□ -2.32
ACLYP53396 AC113410.1-201ENST00000505029 247 ntBASIC0.57□□□□□ -2.32
ACLYP53396 MTND2P38-201ENST00000522536 667 ntBASIC0.57□□□□□ -2.32
ACLYP53396 AC023442.1-201ENST00000531247 422 ntBASIC0.57□□□□□ -2.32
ACLYP53396 AC245505.1-201ENST00000556398 224 ntBASIC0.57□□□□□ -2.32
ACLYP53396 AC131055.1-201ENST00000584626 316 ntBASIC0.57□□□□□ -2.32
ACLYP53396 AC243829.6-201ENST00000612652 106 ntBASIC0.57□□□□□ -2.32
ACLYP53396 SEPT14P17-201ENST00000617978 177 ntBASIC0.57□□□□□ -2.32
ACLYP53396 MIR3674-201ENST00000636576 68 ntBASIC0.57□□□□□ -2.32
ACLYP53396 SNORD114-7-201ENST00000362520 77 ntBASIC0.56□□□□□ -2.32
ACLYP53396 SNORD68-201ENST00000363214 84 ntBASIC0.56□□□□□ -2.32
ACLYP53396 SNORD116-2-201ENST00000384274 95 ntBASIC0.56□□□□□ -2.32
ACLYP53396 Y_RNA.557-201ENST00000384680 107 ntBASIC0.56□□□□□ -2.32
ACLYP53396 SNORD116-6-201ENST00000384711 96 ntBASIC0.56□□□□□ -2.32
ACLYP53396 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
ACLYP53396 RNU6-700P-201ENST00000391043 107 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms