Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC023442.1-201ENST00000531247 422 ntBASIC-0.34□□□□□ -2.46
NUP98P52948 SNORD114-7-201ENST00000362520 77 ntBASIC-0.34□□□□□ -2.46
NUP98P52948 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.34□□□□□ -2.46
NUP98P52948 RNU6-325P-201ENST00000411132 105 ntBASIC-0.34□□□□□ -2.46
NUP98P52948 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-0.34□□□□□ -2.46
NUP98P52948 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.34□□□□□ -2.46
NUP98P52948 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.34□□□□□ -2.46
NUP98P52948 ZNF114P1-201ENST00000453500 292 ntBASIC-0.34□□□□□ -2.46
NUP98P52948 RPL17P19-201ENST00000489069 552 ntBASIC-0.34□□□□□ -2.46
NUP98P52948 SCARNA8-201ENST00000515924 131 ntBASIC-0.34□□□□□ -2.46
NUP98P52948 RN7SKP287-201ENST00000516546 266 ntBASIC-0.34□□□□□ -2.46
NUP98P52948 RBM11P1-201ENST00000604951 799 ntBASIC-0.34□□□□□ -2.46
NUP98P52948 AC022306.3-201ENST00000619930 550 ntBASIC-0.34□□□□□ -2.46
NUP98P52948 AC007671.2-201ENST00000637344 619 ntBASIC-0.34□□□□□ -2.46
NUP98P52948 SNORA18.1-201ENST00000363418 128 ntBASIC-0.35□□□□□ -2.47
NUP98P52948 SNORD115-32-201ENST00000364079 82 ntBASIC-0.35□□□□□ -2.47
NUP98P52948 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.35□□□□□ -2.47
NUP98P52948 MIR106A-201ENST00000384870 81 ntBASIC-0.35□□□□□ -2.47
NUP98P52948 MIR224-201ENST00000384889 81 ntBASIC-0.35□□□□□ -2.47
NUP98P52948 AC098592.1-201ENST00000419352 333 ntBASIC-0.35□□□□□ -2.47
NUP98P52948 AC018865.2-201ENST00000423631 129 ntBASIC-0.35□□□□□ -2.47
NUP98P52948 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.35□□□□□ -2.47
NUP98P52948 AL359672.1-201ENST00000442302 409 ntBASIC-0.35□□□□□ -2.47
NUP98P52948 RNA5SP67-201ENST00000516422 131 ntBASIC-0.35□□□□□ -2.47
NUP98P52948 MIR2115-201ENST00000516657 100 ntBASIC-0.35□□□□□ -2.47
NUP98P52948 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.35□□□□□ -2.47
NUP98P52948 RNU6-448P-201ENST00000517052 107 ntBASIC-0.35□□□□□ -2.47
NUP98P52948 AC018645.2-201ENST00000609151 472 ntBASIC-0.35□□□□□ -2.47
NUP98P52948 AC090517.2-201ENST00000614966 680 ntBASIC-0.35□□□□□ -2.47
NUP98P52948 AP001506.1-201ENST00000615444 211 ntBASIC-0.35□□□□□ -2.47
NUP98P52948 RNA5SP275-201ENST00000363936 118 ntBASIC-0.36□□□□□ -2.47
NUP98P52948 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.36□□□□□ -2.47
NUP98P52948 RNU6-929P-201ENST00000384429 107 ntBASIC-0.36□□□□□ -2.47
NUP98P52948 ELOCP21-201ENST00000412558 336 ntBASIC-0.36□□□□□ -2.47
NUP98P52948 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.36□□□□□ -2.47
NUP98P52948 AC093303.1-201ENST00000514549 295 ntBASIC-0.36□□□□□ -2.47
NUP98P52948 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.36□□□□□ -2.47
NUP98P52948 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.36□□□□□ -2.47
NUP98P52948 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.36□□□□□ -2.47
NUP98P52948 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-0.36□□□□□ -2.47
NUP98P52948 MIR4771-2-201ENST00000577758 74 ntBASIC-0.36□□□□□ -2.47
NUP98P52948 MIR4771-1-201ENST00000582617 74 ntBASIC-0.36□□□□□ -2.47
NUP98P52948 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.36□□□□□ -2.47
NUP98P52948 RNU4-66P-201ENST00000365199 138 ntBASIC-0.36□□□□□ -2.47
NUP98P52948 RNA5SP117-201ENST00000365294 118 ntBASIC-0.36□□□□□ -2.47
NUP98P52948 SNORD38C-201ENST00000384381 69 ntBASIC-0.36□□□□□ -2.47
NUP98P52948 AL606923.1-201ENST00000406616 190 ntBASIC-0.36□□□□□ -2.47
NUP98P52948 MTND4P19-201ENST00000446659 478 ntBASIC-0.36□□□□□ -2.47
NUP98P52948 TPTE2P5-203ENST00000458118 728 ntBASIC-0.36□□□□□ -2.47
NUP98P52948 SNORD4A-201ENST00000459174 72 ntBASIC-0.36□□□□□ -2.47
NUP98P52948 RNU7-159P-201ENST00000459284 62 ntBASIC-0.36□□□□□ -2.47
NUP98P52948 AP002963.1-201ENST00000530590 184 ntBASIC-0.36□□□□□ -2.47
NUP98P52948 AC005176.2-201ENST00000596933 147 ntBASIC-0.36□□□□□ -2.47
NUP98P52948 AC008536.2-201ENST00000607284 349 ntBASIC-0.36□□□□□ -2.47
NUP98P52948 uc_338.4-201ENST00000616635 176 ntBASIC-0.36□□□□□ -2.47
NUP98P52948 RNY3P5-201ENST00000384127 102 ntBASIC-0.37□□□□□ -2.47
NUP98P52948 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.37□□□□□ -2.47
NUP98P52948 SNORA40.3-201ENST00000390964 122 ntBASIC-0.37□□□□□ -2.47
NUP98P52948 RNU2-9P-201ENST00000410194 145 ntBASIC-0.37□□□□□ -2.47
NUP98P52948 MLLT10P1-201ENST00000418346 262 ntBASIC-0.37□□□□□ -2.47
NUP98P52948 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.37□□□□□ -2.47
NUP98P52948 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.37□□□□□ -2.47
NUP98P52948 RNU6-189P-201ENST00000516120 101 ntBASIC-0.37□□□□□ -2.47
NUP98P52948 MIR3684-201ENST00000579779 74 ntBASIC-0.37□□□□□ -2.47
NUP98P52948 AC011458.1-201ENST00000604034 617 ntBASIC-0.37□□□□□ -2.47
NUP98P52948 SNORD115-24-201ENST00000363528 82 ntBASIC-0.38□□□□□ -2.47
NUP98P52948 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.38□□□□□ -2.47
NUP98P52948 SNORD14C-201ENST00000365382 88 ntBASIC-0.38□□□□□ -2.47
NUP98P52948 MIR521-1-201ENST00000384902 87 ntBASIC-0.38□□□□□ -2.47
NUP98P52948 SNORA40.4-201ENST00000390971 128 ntBASIC-0.38□□□□□ -2.47
NUP98P52948 MIR450B-201ENST00000401182 78 ntBASIC-0.38□□□□□ -2.47
NUP98P52948 MIR1468-201ENST00000410600 86 ntBASIC-0.38□□□□□ -2.47
NUP98P52948 RNU4-63P-201ENST00000411313 118 ntBASIC-0.38□□□□□ -2.47
NUP98P52948 AL008987.1-201ENST00000415528 237 ntBASIC-0.38□□□□□ -2.47
NUP98P52948 AL593851.1-201ENST00000426171 157 ntBASIC-0.38□□□□□ -2.47
NUP98P52948 AL358934.1-201ENST00000432346 324 ntBASIC-0.38□□□□□ -2.47
NUP98P52948 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-0.38□□□□□ -2.47
NUP98P52948 MTATP6P14-201ENST00000455189 673 ntBASIC-0.38□□□□□ -2.47
NUP98P52948 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.38□□□□□ -2.47
NUP98P52948 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.38□□□□□ -2.47
NUP98P52948 AC091144.1-201ENST00000519573 138 ntBASIC-0.38□□□□□ -2.47
NUP98P52948 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.38□□□□□ -2.47
NUP98P52948 uc_338.36-201ENST00000622331 158 ntBASIC-0.38□□□□□ -2.47
NUP98P52948 RNU6-136P-201ENST00000384663 107 ntBASIC-0.38□□□□□ -2.47
NUP98P52948 RNU2-54P-201ENST00000410299 190 ntBASIC-0.38□□□□□ -2.47
NUP98P52948 AL390729.2-201ENST00000416137 156 ntBASIC-0.38□□□□□ -2.47
NUP98P52948 MRPS10P2-201ENST00000431226 381 ntBASIC-0.38□□□□□ -2.47
NUP98P52948 RNU7-102P-201ENST00000458948 62 ntBASIC-0.38□□□□□ -2.47
NUP98P52948 SNORD123-201ENST00000459473 70 ntBASIC-0.38□□□□□ -2.47
NUP98P52948 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.38□□□□□ -2.47
NUP98P52948 TUSC7.1-201ENST00000610969 165 ntBASIC-0.38□□□□□ -2.47
NUP98P52948 AL591926.4-201ENST00000616895 298 ntBASIC-0.38□□□□□ -2.47
NUP98P52948 MIR125B2-201ENST00000385128 89 ntBASIC-0.39□□□□□ -2.47
NUP98P52948 AL354751.2-201ENST00000415471 210 ntBASIC-0.39□□□□□ -2.47
NUP98P52948 FTX_2.1-201ENST00000618816 94 ntBASIC-0.39□□□□□ -2.47
NUP98P52948 Y_RNA.159-201ENST00000363674 87 ntBASIC-0.4□□□□□ -2.47
NUP98P52948 RNU6-117P-201ENST00000365415 107 ntBASIC-0.4□□□□□ -2.47
NUP98P52948 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.4□□□□□ -2.47
NUP98P52948 RNU6-747P-201ENST00000390928 104 ntBASIC-0.4□□□□□ -2.47
NUP98P52948 RNU6-241P-201ENST00000391148 104 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms