Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 Y_RNA.368-201ENST00000365547 113 ntBASIC2.22□□□□□ -2.05
CPT1AP50416 Y_RNA.416-201ENST00000384014 113 ntBASIC2.22□□□□□ -2.05
CPT1AP50416 MIR515-2-201ENST00000384883 83 ntBASIC2.22□□□□□ -2.05
CPT1AP50416 MIR515-1-201ENST00000384884 83 ntBASIC2.22□□□□□ -2.05
CPT1AP50416 EBAG9P1-201ENST00000418955 543 ntBASIC2.22□□□□□ -2.05
CPT1AP50416 AL445685.2-201ENST00000422551 342 ntBASIC2.22□□□□□ -2.05
CPT1AP50416 AL135790.2-201ENST00000437701 267 ntBASIC2.22□□□□□ -2.05
CPT1AP50416 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.22□□□□□ -2.05
CPT1AP50416 Y_RNA.673-201ENST00000516306 88 ntBASIC2.22□□□□□ -2.05
CPT1AP50416 Y_RNA.680-201ENST00000516441 93 ntBASIC2.22□□□□□ -2.05
CPT1AP50416 RNU6-63P-201ENST00000516690 95 ntBASIC2.22□□□□□ -2.05
CPT1AP50416 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.22□□□□□ -2.05
CPT1AP50416 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.22□□□□□ -2.05
CPT1AP50416 AL359075.3-201ENST00000613288 217 ntBASIC2.22□□□□□ -2.05
CPT1AP50416 Y_RNA.172-201ENST00000363765 102 ntBASIC2.21□□□□□ -2.06
CPT1AP50416 Y_RNA.275-201ENST00000364726 110 ntBASIC2.21□□□□□ -2.06
CPT1AP50416 RNU6-117P-201ENST00000365415 107 ntBASIC2.21□□□□□ -2.06
CPT1AP50416 Y_RNA.456-201ENST00000384232 111 ntBASIC2.21□□□□□ -2.06
CPT1AP50416 RNU6-662P-201ENST00000384253 104 ntBASIC2.21□□□□□ -2.06
CPT1AP50416 SNORD116-13-201ENST00000384408 92 ntBASIC2.21□□□□□ -2.06
CPT1AP50416 MIR17-201ENST00000385012 84 ntBASIC2.21□□□□□ -2.06
CPT1AP50416 MT-TG-201ENST00000387429 68 ntBASIC2.21□□□□□ -2.06
CPT1AP50416 RNA5SP323-201ENST00000391094 133 ntBASIC2.21□□□□□ -2.06
CPT1AP50416 SNORA40.18-201ENST00000391200 128 ntBASIC2.21□□□□□ -2.06
CPT1AP50416 CYCSP49-201ENST00000420810 319 ntBASIC2.21□□□□□ -2.06
CPT1AP50416 AC055731.1-201ENST00000474387 401 ntBASIC2.21□□□□□ -2.06
CPT1AP50416 AC079804.2-201ENST00000490376 200 ntBASIC2.21□□□□□ -2.06
CPT1AP50416 RNU6-1278P-201ENST00000516130 107 ntBASIC2.21□□□□□ -2.06
CPT1AP50416 RNU1-142P-201ENST00000516682 145 ntBASIC2.21□□□□□ -2.06
CPT1AP50416 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.21□□□□□ -2.06
CPT1AP50416 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.21□□□□□ -2.06
CPT1AP50416 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.21□□□□□ -2.06
CPT1AP50416 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
CPT1AP50416 AL596028.1-201ENST00000326971 197 ntBASIC2.2□□□□□ -2.06
CPT1AP50416 Y_RNA.60-201ENST00000362831 98 ntBASIC2.2□□□□□ -2.06
CPT1AP50416 RNU1-17P-201ENST00000363022 152 ntBASIC2.2□□□□□ -2.06
CPT1AP50416 SNORD27-201ENST00000363981 72 ntBASIC2.2□□□□□ -2.06
CPT1AP50416 Y_RNA.277-201ENST00000364754 102 ntBASIC2.2□□□□□ -2.06
CPT1AP50416 Y_RNA.310-201ENST00000365063 113 ntBASIC2.2□□□□□ -2.06
CPT1AP50416 Y_RNA.478-201ENST00000384358 107 ntBASIC2.2□□□□□ -2.06
CPT1AP50416 Y_RNA.489-201ENST00000384410 101 ntBASIC2.2□□□□□ -2.06
CPT1AP50416 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
CPT1AP50416 RNA5SP450-201ENST00000411206 102 ntBASIC2.2□□□□□ -2.06
CPT1AP50416 AL356379.1-201ENST00000414105 126 ntBASIC2.2□□□□□ -2.06
CPT1AP50416 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
CPT1AP50416 RPS20P10-201ENST00000451209 253 ntBASIC2.2□□□□□ -2.06
CPT1AP50416 RNU6-1023P-201ENST00000516137 106 ntBASIC2.2□□□□□ -2.06
CPT1AP50416 RNU7-99P-201ENST00000516271 62 ntBASIC2.2□□□□□ -2.06
CPT1AP50416 MIR514B-201ENST00000516774 80 ntBASIC2.2□□□□□ -2.06
CPT1AP50416 RNU7-128P-201ENST00000517247 62 ntBASIC2.2□□□□□ -2.06
CPT1AP50416 AC136628.3-201ENST00000521868 290 ntBASIC2.2□□□□□ -2.06
CPT1AP50416 MIR5002-201ENST00000584713 97 ntBASIC2.2□□□□□ -2.06
CPT1AP50416 AP000942.3-201ENST00000603702 160 ntBASIC2.2□□□□□ -2.06
CPT1AP50416 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.2□□□□□ -2.06
CPT1AP50416 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
CPT1AP50416 Y_RNA.140-201ENST00000363474 103 ntBASIC2.19□□□□□ -2.06
CPT1AP50416 Y_RNA.217-201ENST00000364214 105 ntBASIC2.19□□□□□ -2.06
CPT1AP50416 RNU6-740P-201ENST00000364734 105 ntBASIC2.19□□□□□ -2.06
CPT1AP50416 SNORA20.1-201ENST00000364790 130 ntBASIC2.19□□□□□ -2.06
CPT1AP50416 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.19□□□□□ -2.06
CPT1AP50416 RNU6-376P-201ENST00000384731 106 ntBASIC2.19□□□□□ -2.06
CPT1AP50416 Y_RNA.641-201ENST00000459414 105 ntBASIC2.19□□□□□ -2.06
CPT1AP50416 RPS27P21-201ENST00000486977 252 ntBASIC2.19□□□□□ -2.06
CPT1AP50416 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.19□□□□□ -2.06
CPT1AP50416 AC024995.1-201ENST00000523014 93 ntBASIC2.19□□□□□ -2.06
CPT1AP50416 MIR5094-201ENST00000578766 85 ntBASIC2.19□□□□□ -2.06
CPT1AP50416 AC073413.2-201ENST00000604332 360 ntBASIC2.19□□□□□ -2.06
CPT1AP50416 AC069114.2-201ENST00000604699 304 ntBASIC2.19□□□□□ -2.06
CPT1AP50416 AC004832.4-201ENST00000608952 331 ntBASIC2.19□□□□□ -2.06
CPT1AP50416 U6.108-201ENST00000637764 58 ntBASIC2.19□□□□□ -2.06
CPT1AP50416 ZNF720P1-201ENST00000562403 1939 ntBASIC2.19□□□□□ -2.06
CPT1AP50416 Y_RNA.20-201ENST00000362479 113 ntBASIC2.18□□□□□ -2.06
CPT1AP50416 Y_RNA.117-201ENST00000363294 101 ntBASIC2.18□□□□□ -2.06
CPT1AP50416 RNU6-801P-201ENST00000364087 105 ntBASIC2.18□□□□□ -2.06
CPT1AP50416 Y_RNA.476-201ENST00000384347 108 ntBASIC2.18□□□□□ -2.06
CPT1AP50416 RNU6-1289P-201ENST00000384431 106 ntBASIC2.18□□□□□ -2.06
CPT1AP50416 SNORA8-201ENST00000384574 139 ntBASIC2.18□□□□□ -2.06
CPT1AP50416 SNORA48.1-201ENST00000390879 135 ntBASIC2.18□□□□□ -2.06
CPT1AP50416 RNA5SP511-201ENST00000410487 115 ntBASIC2.18□□□□□ -2.06
CPT1AP50416 RNA5SP501-201ENST00000410990 112 ntBASIC2.18□□□□□ -2.06
CPT1AP50416 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.18□□□□□ -2.06
CPT1AP50416 AC104435.1-201ENST00000483483 166 ntBASIC2.18□□□□□ -2.06
CPT1AP50416 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.18□□□□□ -2.06
CPT1AP50416 RNVU1-2-201ENST00000516326 135 ntBASIC2.18□□□□□ -2.06
CPT1AP50416 AL162424.1-201ENST00000602325 221 ntBASIC2.18□□□□□ -2.06
CPT1AP50416 BX284668.6-201ENST00000606899 438 ntBASIC2.18□□□□□ -2.06
CPT1AP50416 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.18□□□□□ -2.06
CPT1AP50416 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CPT1AP50416 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.17□□□□□ -2.06
CPT1AP50416 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
CPT1AP50416 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CPT1AP50416 RNU6-1272P-201ENST00000362776 107 ntBASIC2.17□□□□□ -2.06
CPT1AP50416 RNU6-136P-201ENST00000384663 107 ntBASIC2.17□□□□□ -2.06
CPT1AP50416 HSPE1P21-201ENST00000438283 308 ntBASIC2.17□□□□□ -2.06
CPT1AP50416 MTND2P29-201ENST00000438595 412 ntBASIC2.17□□□□□ -2.06
CPT1AP50416 RPL36AP21-201ENST00000490372 323 ntBASIC2.17□□□□□ -2.06
CPT1AP50416 MIR4643-201ENST00000577473 78 ntBASIC2.17□□□□□ -2.06
CPT1AP50416 MIR5089-201ENST00000580047 84 ntBASIC2.17□□□□□ -2.06
CPT1AP50416 AC068647.2-201ENST00000637380 353 ntBASIC2.17□□□□□ -2.06
CPT1AP50416 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms