Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 RNU4-84P-201ENST00000364200 139 ntBASIC2.81□□□□□ -1.96
MRE11P49959 RNU6-275P-201ENST00000364910 107 ntBASIC2.81□□□□□ -1.96
MRE11P49959 SNORA8.3-201ENST00000384679 139 ntBASIC2.81□□□□□ -1.96
MRE11P49959 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.81□□□□□ -1.96
MRE11P49959 RPL23AP7-203ENST00000449021 469 ntBASIC2.81□□□□□ -1.96
MRE11P49959 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.81□□□□□ -1.96
MRE11P49959 Y_RNA.797-201ENST00000515977 94 ntBASIC2.81□□□□□ -1.96
MRE11P49959 NDUFA5P6-201ENST00000542110 379 ntBASIC2.81□□□□□ -1.96
MRE11P49959 AC018630.3-201ENST00000542637 96 ntBASIC2.81□□□□□ -1.96
MRE11P49959 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.81□□□□□ -1.96
MRE11P49959 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
MRE11P49959 Z82209.1-201ENST00000422141 2135 ntBASIC2.81□□□□□ -1.96
MRE11P49959 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
MRE11P49959 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.81□□□□□ -1.96
MRE11P49959 Y_RNA.172-201ENST00000363765 102 ntBASIC2.8□□□□□ -1.96
MRE11P49959 RNU1-112P-201ENST00000364401 164 ntBASIC2.8□□□□□ -1.96
MRE11P49959 Y_RNA.357-201ENST00000365487 109 ntBASIC2.8□□□□□ -1.96
MRE11P49959 RNU6-449P-201ENST00000383914 107 ntBASIC2.8□□□□□ -1.96
MRE11P49959 SNORA20B-201ENST00000384220 132 ntBASIC2.8□□□□□ -1.96
MRE11P49959 RNU6-975P-201ENST00000384296 105 ntBASIC2.8□□□□□ -1.96
MRE11P49959 Y_RNA.572-201ENST00000384757 98 ntBASIC2.8□□□□□ -1.96
MRE11P49959 MIR873-201ENST00000401120 77 ntBASIC2.8□□□□□ -1.96
MRE11P49959 AC074290.1-201ENST00000448883 135 ntBASIC2.8□□□□□ -1.96
MRE11P49959 AC114982.1-201ENST00000469402 321 ntBASIC2.8□□□□□ -1.96
MRE11P49959 RPL23AP42-201ENST00000471152 471 ntBASIC2.8□□□□□ -1.96
MRE11P49959 AC104435.1-201ENST00000483483 166 ntBASIC2.8□□□□□ -1.96
MRE11P49959 RNU1-104P-201ENST00000517280 175 ntBASIC2.8□□□□□ -1.96
MRE11P49959 MIR4744-201ENST00000581563 82 ntBASIC2.8□□□□□ -1.96
MRE11P49959 Y_RNA.802-201ENST00000614892 130 ntBASIC2.8□□□□□ -1.96
MRE11P49959 MIR8070-201ENST00000616510 88 ntBASIC2.8□□□□□ -1.96
MRE11P49959 snoZ196.1-201ENST00000625269 89 ntBASIC2.8□□□□□ -1.96
MRE11P49959 MIR203B-201ENST00000636080 86 ntBASIC2.8□□□□□ -1.96
MRE11P49959 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
MRE11P49959 AL159152.1-201ENST00000635019 2587 ntBASIC2.8□□□□□ -1.96
MRE11P49959 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
MRE11P49959 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
MRE11P49959 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
MRE11P49959 Y_RNA.24-201ENST00000362508 103 ntBASIC2.79□□□□□ -1.96
MRE11P49959 RNU6-103P-201ENST00000363686 107 ntBASIC2.79□□□□□ -1.96
MRE11P49959 SNORD31B-201ENST00000364977 69 ntBASIC2.79□□□□□ -1.96
MRE11P49959 SNORD14D-201ENST00000384390 87 ntBASIC2.79□□□□□ -1.96
MRE11P49959 MIR526A2-201ENST00000390198 65 ntBASIC2.79□□□□□ -1.96
MRE11P49959 U6atac.2-201ENST00000408644 118 ntBASIC2.79□□□□□ -1.96
MRE11P49959 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.79□□□□□ -1.96
MRE11P49959 RNU6-221P-201ENST00000459541 99 ntBASIC2.79□□□□□ -1.96
MRE11P49959 SCARNA3-201ENST00000517097 143 ntBASIC2.79□□□□□ -1.96
MRE11P49959 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.79□□□□□ -1.96
MRE11P49959 AP001485.1-201ENST00000604799 199 ntBASIC2.79□□□□□ -1.96
MRE11P49959 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.79□□□□□ -1.96
MRE11P49959 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.78□□□□□ -1.96
MRE11P49959 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
MRE11P49959 SNORA27.1-201ENST00000362604 124 ntBASIC2.78□□□□□ -1.96
MRE11P49959 RNU6-1205P-201ENST00000363625 106 ntBASIC2.78□□□□□ -1.96
MRE11P49959 SNORA25.9-201ENST00000365087 128 ntBASIC2.78□□□□□ -1.96
MRE11P49959 MIR218-1-201ENST00000384999 110 ntBASIC2.78□□□□□ -1.96
MRE11P49959 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
MRE11P49959 RNU6-578P-201ENST00000390980 103 ntBASIC2.78□□□□□ -1.96
MRE11P49959 RNU6-57P-201ENST00000411348 103 ntBASIC2.78□□□□□ -1.96
MRE11P49959 AC007064.1-201ENST00000412238 351 ntBASIC2.78□□□□□ -1.96
MRE11P49959 EBAG9P1-201ENST00000418955 543 ntBASIC2.78□□□□□ -1.96
MRE11P49959 AL356320.1-201ENST00000429616 163 ntBASIC2.78□□□□□ -1.96
MRE11P49959 AC016717.1-201ENST00000448918 286 ntBASIC2.78□□□□□ -1.96
MRE11P49959 AC016925.1-201ENST00000458303 298 ntBASIC2.78□□□□□ -1.96
MRE11P49959 AC090515.1-201ENST00000465295 476 ntBASIC2.78□□□□□ -1.96
MRE11P49959 AC079804.2-201ENST00000490376 200 ntBASIC2.78□□□□□ -1.96
MRE11P49959 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.78□□□□□ -1.96
MRE11P49959 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.78□□□□□ -1.96
MRE11P49959 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
MRE11P49959 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
MRE11P49959 WWP1P1-201ENST00000466609 2769 ntBASIC2.78□□□□□ -1.97
MRE11P49959 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
MRE11P49959 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
MRE11P49959 RNU6-969P-201ENST00000383900 105 ntBASIC2.77□□□□□ -1.97
MRE11P49959 Y_RNA.400-201ENST00000383963 111 ntBASIC2.77□□□□□ -1.97
MRE11P49959 MIR524-201ENST00000385242 87 ntBASIC2.77□□□□□ -1.97
MRE11P49959 HSPE1P13-201ENST00000451143 297 ntBASIC2.77□□□□□ -1.97
MRE11P49959 SNORD65B-201ENST00000459126 73 ntBASIC2.77□□□□□ -1.97
MRE11P49959 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.77□□□□□ -1.97
MRE11P49959 AC010598.1-201ENST00000510378 103 ntBASIC2.77□□□□□ -1.97
MRE11P49959 SCARNA8-201ENST00000515924 131 ntBASIC2.77□□□□□ -1.97
MRE11P49959 RNU6-1337P-201ENST00000516525 95 ntBASIC2.77□□□□□ -1.97
MRE11P49959 RNU6-453P-201ENST00000516819 85 ntBASIC2.77□□□□□ -1.97
MRE11P49959 AC121758.2-201ENST00000553271 193 ntBASIC2.77□□□□□ -1.97
MRE11P49959 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.77□□□□□ -1.97
MRE11P49959 AC105245.1-201ENST00000581934 244 ntBASIC2.77□□□□□ -1.97
MRE11P49959 MIR3199-1-201ENST00000582434 88 ntBASIC2.77□□□□□ -1.97
MRE11P49959 MIR6895-201ENST00000613497 78 ntBASIC2.77□□□□□ -1.97
MRE11P49959 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.77□□□□□ -1.97
MRE11P49959 Y_RNA.291-201ENST00000364886 113 ntBASIC2.76□□□□□ -1.97
MRE11P49959 U8.7-201ENST00000364940 136 ntBASIC2.76□□□□□ -1.97
MRE11P49959 RNU6-81P-201ENST00000365608 104 ntBASIC2.76□□□□□ -1.97
MRE11P49959 SNORD116-13-201ENST00000384408 92 ntBASIC2.76□□□□□ -1.97
MRE11P49959 MIR616-201ENST00000385293 97 ntBASIC2.76□□□□□ -1.97
MRE11P49959 RNU6-239P-201ENST00000390990 99 ntBASIC2.76□□□□□ -1.97
MRE11P49959 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.76□□□□□ -1.97
MRE11P49959 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.76□□□□□ -1.97
MRE11P49959 HSPE1P21-201ENST00000438283 308 ntBASIC2.76□□□□□ -1.97
MRE11P49959 AC080013.2-201ENST00000460866 323 ntBASIC2.76□□□□□ -1.97
MRE11P49959 RPS26P55-201ENST00000471178 356 ntBASIC2.76□□□□□ -1.97
MRE11P49959 RNU6-965P-201ENST00000516721 96 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms