Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AL451046.2-201ENST00000403074 277 ntBASIC0.78□□□□□ -2.28
CSNK1A1P48729 Y_RNA.592-201ENST00000410274 109 ntBASIC0.78□□□□□ -2.28
CSNK1A1P48729 RNU6-1156P-201ENST00000410365 100 ntBASIC0.78□□□□□ -2.28
CSNK1A1P48729 Y_RNA.646-201ENST00000410980 101 ntBASIC0.78□□□□□ -2.28
CSNK1A1P48729 MTND4P28-201ENST00000426217 387 ntBASIC0.78□□□□□ -2.28
CSNK1A1P48729 AC245047.7-201ENST00000440265 293 ntBASIC0.78□□□□□ -2.28
CSNK1A1P48729 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.78□□□□□ -2.28
CSNK1A1P48729 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.78□□□□□ -2.28
CSNK1A1P48729 AL358944.1-201ENST00000528537 144 ntBASIC0.78□□□□□ -2.28
CSNK1A1P48729 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.78□□□□□ -2.28
CSNK1A1P48729 MIR6857-201ENST00000613267 93 ntBASIC0.78□□□□□ -2.28
CSNK1A1P48729 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CSNK1A1P48729 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.29
CSNK1A1P48729 RNU6-1188P-201ENST00000363795 107 ntBASIC0.77□□□□□ -2.29
CSNK1A1P48729 Y_RNA.248-201ENST00000364501 109 ntBASIC0.77□□□□□ -2.29
CSNK1A1P48729 SNORD114-24-201ENST00000365029 72 ntBASIC0.77□□□□□ -2.29
CSNK1A1P48729 SNORD81.2-201ENST00000365153 76 ntBASIC0.77□□□□□ -2.29
CSNK1A1P48729 RNU6-310P-201ENST00000384655 107 ntBASIC0.77□□□□□ -2.29
CSNK1A1P48729 Y_RNA.577-201ENST00000384794 101 ntBASIC0.77□□□□□ -2.29
CSNK1A1P48729 MIR200A-201ENST00000384875 90 ntBASIC0.77□□□□□ -2.29
CSNK1A1P48729 MIR526A1-201ENST00000384897 85 ntBASIC0.77□□□□□ -2.29
CSNK1A1P48729 MIR520G-201ENST00000385064 90 ntBASIC0.77□□□□□ -2.29
CSNK1A1P48729 SNORA69.1-201ENST00000390904 137 ntBASIC0.77□□□□□ -2.29
CSNK1A1P48729 RNU2-64P-201ENST00000411315 191 ntBASIC0.77□□□□□ -2.29
CSNK1A1P48729 RNU6-1304P-201ENST00000411374 106 ntBASIC0.77□□□□□ -2.29
CSNK1A1P48729 AC063976.4-201ENST00000421971 163 ntBASIC0.77□□□□□ -2.29
CSNK1A1P48729 AC104332.1-201ENST00000440471 797 ntBASIC0.77□□□□□ -2.29
CSNK1A1P48729 SUMO1P2-201ENST00000452524 304 ntBASIC0.77□□□□□ -2.29
CSNK1A1P48729 RPS26P48-201ENST00000491713 339 ntBASIC0.77□□□□□ -2.29
CSNK1A1P48729 RNU6-113P-201ENST00000516653 101 ntBASIC0.77□□□□□ -2.29
CSNK1A1P48729 AC023442.1-201ENST00000531247 422 ntBASIC0.77□□□□□ -2.29
CSNK1A1P48729 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.77□□□□□ -2.29
CSNK1A1P48729 AC092794.1-201ENST00000612734 582 ntBASIC0.77□□□□□ -2.29
CSNK1A1P48729 TPTEP1-208ENST00000636884 213 ntBASIC0.77□□□□□ -2.29
CSNK1A1P48729 Y_RNA.101-201ENST00000363154 102 ntBASIC0.76□□□□□ -2.29
CSNK1A1P48729 SNORD114-2-201ENST00000363953 78 ntBASIC0.76□□□□□ -2.29
CSNK1A1P48729 RNU6-926P-201ENST00000384075 107 ntBASIC0.76□□□□□ -2.29
CSNK1A1P48729 SNORA75.6-201ENST00000391318 127 ntBASIC0.76□□□□□ -2.29
CSNK1A1P48729 RNU6-370P-201ENST00000411008 104 ntBASIC0.76□□□□□ -2.29
CSNK1A1P48729 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.76□□□□□ -2.29
CSNK1A1P48729 AL354751.2-201ENST00000415471 210 ntBASIC0.76□□□□□ -2.29
CSNK1A1P48729 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.76□□□□□ -2.29
CSNK1A1P48729 AC002429.1-201ENST00000437672 148 ntBASIC0.76□□□□□ -2.29
CSNK1A1P48729 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.76□□□□□ -2.29
CSNK1A1P48729 RPEP5-201ENST00000441137 268 ntBASIC0.76□□□□□ -2.29
CSNK1A1P48729 RNU6-322P-201ENST00000516010 103 ntBASIC0.76□□□□□ -2.29
CSNK1A1P48729 SNORD79.1-201ENST00000516069 84 ntBASIC0.76□□□□□ -2.29
CSNK1A1P48729 RNU6-1337P-201ENST00000516525 95 ntBASIC0.76□□□□□ -2.29
CSNK1A1P48729 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.76□□□□□ -2.29
CSNK1A1P48729 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.76□□□□□ -2.29
CSNK1A1P48729 AC022306.2-201ENST00000617563 647 ntBASIC0.76□□□□□ -2.29
CSNK1A1P48729 RNY3P11-201ENST00000364153 102 ntBASIC0.75□□□□□ -2.29
CSNK1A1P48729 RNU6-876P-201ENST00000391295 104 ntBASIC0.75□□□□□ -2.29
CSNK1A1P48729 Y_RNA.599-201ENST00000410489 109 ntBASIC0.75□□□□□ -2.29
CSNK1A1P48729 Y_RNA.619-201ENST00000410951 90 ntBASIC0.75□□□□□ -2.29
CSNK1A1P48729 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.75□□□□□ -2.29
CSNK1A1P48729 AL162725.1-201ENST00000435405 301 ntBASIC0.75□□□□□ -2.29
CSNK1A1P48729 RPS4XP11-201ENST00000446897 772 ntBASIC0.75□□□□□ -2.29
CSNK1A1P48729 ELOCP24-201ENST00000456370 334 ntBASIC0.75□□□□□ -2.29
CSNK1A1P48729 RPL30P15-201ENST00000457129 321 ntBASIC0.75□□□□□ -2.29
CSNK1A1P48729 snoU13.25-201ENST00000458945 104 ntBASIC0.75□□□□□ -2.29
CSNK1A1P48729 Y_RNA.635-201ENST00000459041 101 ntBASIC0.75□□□□□ -2.29
CSNK1A1P48729 SNORD124-201ENST00000459577 104 ntBASIC0.75□□□□□ -2.29
CSNK1A1P48729 ACA64.5-201ENST00000516207 127 ntBASIC0.75□□□□□ -2.29
CSNK1A1P48729 RNA5SP102-201ENST00000516865 106 ntBASIC0.75□□□□□ -2.29
CSNK1A1P48729 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.75□□□□□ -2.29
CSNK1A1P48729 MIR4653-201ENST00000585107 83 ntBASIC0.75□□□□□ -2.29
CSNK1A1P48729 FAM71BP1-201ENST00000604431 523 ntBASIC0.75□□□□□ -2.29
CSNK1A1P48729 AC211469.2-201ENST00000605461 205 ntBASIC0.75□□□□□ -2.29
CSNK1A1P48729 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.75□□□□□ -2.29
CSNK1A1P48729 RNU6-833P-201ENST00000363486 107 ntBASIC0.74□□□□□ -2.29
CSNK1A1P48729 Y_RNA.172-201ENST00000363765 102 ntBASIC0.74□□□□□ -2.29
CSNK1A1P48729 RNU6-890P-201ENST00000384121 107 ntBASIC0.74□□□□□ -2.29
CSNK1A1P48729 Y_RNA.474-201ENST00000384341 102 ntBASIC0.74□□□□□ -2.29
CSNK1A1P48729 SNORD116-13-201ENST00000384408 92 ntBASIC0.74□□□□□ -2.29
CSNK1A1P48729 MIR625-201ENST00000385047 85 ntBASIC0.74□□□□□ -2.29
CSNK1A1P48729 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.74□□□□□ -2.29
CSNK1A1P48729 RNU6-1199P-201ENST00000411249 104 ntBASIC0.74□□□□□ -2.29
CSNK1A1P48729 MRPS18CP6-201ENST00000423587 223 ntBASIC0.74□□□□□ -2.29
CSNK1A1P48729 MTND1P2-201ENST00000430604 821 ntBASIC0.74□□□□□ -2.29
CSNK1A1P48729 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.74□□□□□ -2.29
CSNK1A1P48729 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.74□□□□□ -2.29
CSNK1A1P48729 SNORA25.10-201ENST00000515926 124 ntBASIC0.74□□□□□ -2.29
CSNK1A1P48729 RNU6-264P-201ENST00000517134 104 ntBASIC0.74□□□□□ -2.29
CSNK1A1P48729 MIR4698-201ENST00000577795 80 ntBASIC0.74□□□□□ -2.29
CSNK1A1P48729 MIR5690-201ENST00000583739 73 ntBASIC0.74□□□□□ -2.29
CSNK1A1P48729 FAM106DP-201ENST00000586416 501 ntBASIC0.74□□□□□ -2.29
CSNK1A1P48729 AC013244.2-201ENST00000603396 103 ntBASIC0.74□□□□□ -2.29
CSNK1A1P48729 AL357312.1-201ENST00000603879 298 ntBASIC0.74□□□□□ -2.29
CSNK1A1P48729 PRELID3BP2-201ENST00000605362 201 ntBASIC0.74□□□□□ -2.29
CSNK1A1P48729 AC004832.4-201ENST00000608952 331 ntBASIC0.74□□□□□ -2.29
CSNK1A1P48729 AL096861.1-201ENST00000610899 123 ntBASIC0.74□□□□□ -2.29
CSNK1A1P48729 U6atac.1-201ENST00000616025 117 ntBASIC0.74□□□□□ -2.29
CSNK1A1P48729 AC240442.1-201ENST00000616055 283 ntBASIC0.74□□□□□ -2.29
CSNK1A1P48729 AL008636.1-201ENST00000625038 1018 ntBASIC0.74□□□□□ -2.29
CSNK1A1P48729 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.74□□□□□ -2.29
CSNK1A1P48729 MIR146A-201ENST00000385201 99 ntBASIC0.73□□□□□ -2.29
CSNK1A1P48729 MIR891A-201ENST00000401237 79 ntBASIC0.73□□□□□ -2.29
CSNK1A1P48729 AL031003.1-201ENST00000404229 172 ntBASIC0.73□□□□□ -2.29
CSNK1A1P48729 PIGPP3-201ENST00000425307 415 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 179.3 ms