Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 RNU4-50P-201ENST00000364361 141 ntBASIC1.37□□□□□ -2.19
TNFRSF4P43489 Y_RNA.799-201ENST00000364992 102 ntBASIC1.37□□□□□ -2.19
TNFRSF4P43489 SNORA20B-201ENST00000384220 132 ntBASIC1.37□□□□□ -2.19
TNFRSF4P43489 MIR320A-201ENST00000385302 82 ntBASIC1.37□□□□□ -2.19
TNFRSF4P43489 RPL21P1-201ENST00000399532 476 ntBASIC1.37□□□□□ -2.19
TNFRSF4P43489 RNU6-902P-201ENST00000517212 91 ntBASIC1.37□□□□□ -2.19
TNFRSF4P43489 AC055872.1-201ENST00000570978 278 ntBASIC1.37□□□□□ -2.19
TNFRSF4P43489 MIR3684-201ENST00000579779 74 ntBASIC1.37□□□□□ -2.19
TNFRSF4P43489 MIR3937-201ENST00000580135 106 ntBASIC1.37□□□□□ -2.19
TNFRSF4P43489 MIR4438-201ENST00000585271 93 ntBASIC1.37□□□□□ -2.19
TNFRSF4P43489 AL356055.1-201ENST00000602528 446 ntBASIC1.37□□□□□ -2.19
TNFRSF4P43489 AC006380.1-201ENST00000603598 186 ntBASIC1.37□□□□□ -2.19
TNFRSF4P43489 AC124312.5-201ENST00000604451 268 ntBASIC1.37□□□□□ -2.19
TNFRSF4P43489 U6.115-201ENST00000636045 103 ntBASIC1.37□□□□□ -2.19
TNFRSF4P43489 RNU6-324P-201ENST00000363957 106 ntBASIC1.36□□□□□ -2.19
TNFRSF4P43489 RNU6-450P-201ENST00000364654 107 ntBASIC1.36□□□□□ -2.19
TNFRSF4P43489 Y_RNA.389-201ENST00000383924 113 ntBASIC1.36□□□□□ -2.19
TNFRSF4P43489 Y_RNA.458-201ENST00000384240 102 ntBASIC1.36□□□□□ -2.19
TNFRSF4P43489 MRPL42P3-201ENST00000401492 326 ntBASIC1.36□□□□□ -2.19
TNFRSF4P43489 AL355796.1-201ENST00000406706 323 ntBASIC1.36□□□□□ -2.19
TNFRSF4P43489 RNU1-98P-201ENST00000458992 160 ntBASIC1.36□□□□□ -2.19
TNFRSF4P43489 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.36□□□□□ -2.19
TNFRSF4P43489 RNU6-155P-201ENST00000516347 100 ntBASIC1.36□□□□□ -2.19
TNFRSF4P43489 Y_RNA.711-201ENST00000516993 102 ntBASIC1.36□□□□□ -2.19
TNFRSF4P43489 AC015688.6-201ENST00000577737 104 ntBASIC1.36□□□□□ -2.19
TNFRSF4P43489 MIR3171-201ENST00000584270 74 ntBASIC1.36□□□□□ -2.19
TNFRSF4P43489 AC044792.1-201ENST00000593294 196 ntBASIC1.36□□□□□ -2.19
TNFRSF4P43489 AL121655.1-201ENST00000605811 308 ntBASIC1.36□□□□□ -2.19
TNFRSF4P43489 U6.73-201ENST00000619194 103 ntBASIC1.36□□□□□ -2.19
TNFRSF4P43489 AL121890.5-201ENST00000620848 304 ntBASIC1.36□□□□□ -2.19
TNFRSF4P43489 AC091895.1-201ENST00000624494 256 ntBASIC1.36□□□□□ -2.19
TNFRSF4P43489 U6.108-201ENST00000637764 58 ntBASIC1.36□□□□□ -2.19
TNFRSF4P43489 RNA5SP363-201ENST00000365072 115 ntBASIC1.35□□□□□ -2.19
TNFRSF4P43489 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.35□□□□□ -2.19
TNFRSF4P43489 Y_RNA.439-201ENST00000384119 94 ntBASIC1.35□□□□□ -2.19
TNFRSF4P43489 MIR194-1-201ENST00000384892 85 ntBASIC1.35□□□□□ -2.19
TNFRSF4P43489 RNU6-101P-201ENST00000410323 104 ntBASIC1.35□□□□□ -2.19
TNFRSF4P43489 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.35□□□□□ -2.19
TNFRSF4P43489 AC005002.2-201ENST00000438228 269 ntBASIC1.35□□□□□ -2.19
TNFRSF4P43489 AC027119.1-201ENST00000440877 241 ntBASIC1.35□□□□□ -2.19
TNFRSF4P43489 RPEP5-201ENST00000441137 268 ntBASIC1.35□□□□□ -2.19
TNFRSF4P43489 MRPS10P1-201ENST00000448483 130 ntBASIC1.35□□□□□ -2.19
TNFRSF4P43489 U8.20-201ENST00000459445 131 ntBASIC1.35□□□□□ -2.19
TNFRSF4P43489 AC093852.1-201ENST00000503587 266 ntBASIC1.35□□□□□ -2.19
TNFRSF4P43489 RNU6-397P-201ENST00000516226 104 ntBASIC1.35□□□□□ -2.19
TNFRSF4P43489 AC019176.1-201ENST00000518519 225 ntBASIC1.35□□□□□ -2.19
TNFRSF4P43489 AC020661.2-201ENST00000560114 134 ntBASIC1.35□□□□□ -2.19
TNFRSF4P43489 MIR3660-201ENST00000584845 100 ntBASIC1.35□□□□□ -2.19
TNFRSF4P43489 AL929325.1-201ENST00000603096 117 ntBASIC1.35□□□□□ -2.19
TNFRSF4P43489 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.35□□□□□ -2.19
TNFRSF4P43489 MIR7111-201ENST00000619751 72 ntBASIC1.35□□□□□ -2.19
TNFRSF4P43489 AC006435.5-201ENST00000624486 112 ntBASIC1.35□□□□□ -2.19
TNFRSF4P43489 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.34□□□□□ -2.19
TNFRSF4P43489 SNORA27.1-201ENST00000362604 124 ntBASIC1.34□□□□□ -2.19
TNFRSF4P43489 Y_RNA.101-201ENST00000363154 102 ntBASIC1.34□□□□□ -2.19
TNFRSF4P43489 Y_RNA.122-201ENST00000363331 96 ntBASIC1.34□□□□□ -2.19
TNFRSF4P43489 Y_RNA.224-201ENST00000364308 111 ntBASIC1.34□□□□□ -2.19
TNFRSF4P43489 Y_RNA.230-201ENST00000364348 109 ntBASIC1.34□□□□□ -2.19
TNFRSF4P43489 RNU6-1175P-201ENST00000365200 107 ntBASIC1.34□□□□□ -2.19
TNFRSF4P43489 RNU6-53P-201ENST00000365367 106 ntBASIC1.34□□□□□ -2.19
TNFRSF4P43489 RNU6-1065P-201ENST00000384513 106 ntBASIC1.34□□□□□ -2.19
TNFRSF4P43489 RNU6-997P-201ENST00000384725 107 ntBASIC1.34□□□□□ -2.19
TNFRSF4P43489 Y_RNA.645-201ENST00000391229 102 ntBASIC1.34□□□□□ -2.19
TNFRSF4P43489 RN7SKP200-201ENST00000410564 320 ntBASIC1.34□□□□□ -2.19
TNFRSF4P43489 RPS27P1-201ENST00000450552 247 ntBASIC1.34□□□□□ -2.19
TNFRSF4P43489 RNA5SP20-201ENST00000515976 84 ntBASIC1.34□□□□□ -2.19
TNFRSF4P43489 RNU7-99P-201ENST00000516271 62 ntBASIC1.34□□□□□ -2.19
TNFRSF4P43489 RNU2-12P-201ENST00000517216 168 ntBASIC1.34□□□□□ -2.19
TNFRSF4P43489 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.34□□□□□ -2.19
TNFRSF4P43489 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TNFRSF4P43489 AC073413.2-201ENST00000604332 360 ntBASIC1.34□□□□□ -2.19
TNFRSF4P43489 AC040896.1-201ENST00000613819 479 ntBASIC1.34□□□□□ -2.19
TNFRSF4P43489 AC022140.2-201ENST00000623500 188 ntBASIC1.34□□□□□ -2.19
TNFRSF4P43489 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.34□□□□□ -2.2
TNFRSF4P43489 RNU6-1123P-201ENST00000362347 106 ntBASIC1.33□□□□□ -2.2
TNFRSF4P43489 Y_RNA.124-201ENST00000363339 93 ntBASIC1.33□□□□□ -2.2
TNFRSF4P43489 Y_RNA.191-201ENST00000363972 113 ntBASIC1.33□□□□□ -2.2
TNFRSF4P43489 MIR513A1-201ENST00000385138 129 ntBASIC1.33□□□□□ -2.2
TNFRSF4P43489 SNORA40.6-201ENST00000391153 128 ntBASIC1.33□□□□□ -2.2
TNFRSF4P43489 MIR873-201ENST00000401120 77 ntBASIC1.33□□□□□ -2.2
TNFRSF4P43489 RNU2-54P-201ENST00000410299 190 ntBASIC1.33□□□□□ -2.2
TNFRSF4P43489 AC010154.1-201ENST00000425857 269 ntBASIC1.33□□□□□ -2.2
TNFRSF4P43489 AC245047.3-201ENST00000429428 127 ntBASIC1.33□□□□□ -2.2
TNFRSF4P43489 AL606517.2-201ENST00000442855 241 ntBASIC1.33□□□□□ -2.2
TNFRSF4P43489 SUMO1P2-201ENST00000452524 304 ntBASIC1.33□□□□□ -2.2
TNFRSF4P43489 RNU7-94P-201ENST00000459576 63 ntBASIC1.33□□□□□ -2.2
TNFRSF4P43489 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.33□□□□□ -2.2
TNFRSF4P43489 AC097462.1-201ENST00000514125 324 ntBASIC1.33□□□□□ -2.2
TNFRSF4P43489 RNA5SP102-201ENST00000516865 106 ntBASIC1.33□□□□□ -2.2
TNFRSF4P43489 RNU7-110P-201ENST00000516891 62 ntBASIC1.33□□□□□ -2.2
TNFRSF4P43489 Y_RNA.713-201ENST00000517013 96 ntBASIC1.33□□□□□ -2.2
TNFRSF4P43489 RNU7-172P-201ENST00000517125 64 ntBASIC1.33□□□□□ -2.2
TNFRSF4P43489 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.33□□□□□ -2.2
TNFRSF4P43489 AC022616.4-201ENST00000522985 181 ntBASIC1.33□□□□□ -2.2
TNFRSF4P43489 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.33□□□□□ -2.2
TNFRSF4P43489 AC022217.4-201ENST00000604389 163 ntBASIC1.33□□□□□ -2.2
TNFRSF4P43489 AL021879.1-201ENST00000611756 288 ntBASIC1.33□□□□□ -2.2
TNFRSF4P43489 AC010205.1-201ENST00000616668 449 ntBASIC1.33□□□□□ -2.2
TNFRSF4P43489 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.33□□□□□ -2.2
TNFRSF4P43489 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 188.7 ms