Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 MIR3915-201ENST00000578518 97 ntBASIC-0.14□□□□□ -2.43
SSR2P43308 MIR548AR-201ENST00000582191 57 ntBASIC-0.14□□□□□ -2.43
SSR2P43308 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.14□□□□□ -2.43
SSR2P43308 MIR410-201ENST00000362222 80 ntBASIC-0.15□□□□□ -2.43
SSR2P43308 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.15□□□□□ -2.43
SSR2P43308 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.15□□□□□ -2.43
SSR2P43308 RNU4-66P-201ENST00000365199 138 ntBASIC-0.15□□□□□ -2.43
SSR2P43308 RNU4-20P-201ENST00000365601 151 ntBASIC-0.15□□□□□ -2.43
SSR2P43308 SNORA8.2-201ENST00000384372 139 ntBASIC-0.15□□□□□ -2.43
SSR2P43308 SNORA75.6-201ENST00000391318 127 ntBASIC-0.15□□□□□ -2.43
SSR2P43308 AL353193.1-201ENST00000421444 268 ntBASIC-0.15□□□□□ -2.43
SSR2P43308 AL606489.2-201ENST00000433886 234 ntBASIC-0.15□□□□□ -2.43
SSR2P43308 AC116353.2-201ENST00000505332 712 ntBASIC-0.15□□□□□ -2.43
SSR2P43308 RN7SKP287-201ENST00000516546 266 ntBASIC-0.15□□□□□ -2.43
SSR2P43308 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.15□□□□□ -2.43
SSR2P43308 MIR5696-201ENST00000578474 85 ntBASIC-0.15□□□□□ -2.43
SSR2P43308 AC104408.1-201ENST00000605241 170 ntBASIC-0.15□□□□□ -2.43
SSR2P43308 MIR7111-201ENST00000619751 72 ntBASIC-0.15□□□□□ -2.43
SSR2P43308 uc_338.16-201ENST00000621804 95 ntBASIC-0.15□□□□□ -2.43
SSR2P43308 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.15□□□□□ -2.43
SSR2P43308 AC121333.1-201ENST00000567488 2709 ntBASIC-0.15□□□□□ -2.43
SSR2P43308 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.16□□□□□ -2.44
SSR2P43308 MT-TH-201ENST00000387441 69 ntBASIC-0.16□□□□□ -2.44
SSR2P43308 SNORD28B-201ENST00000390993 75 ntBASIC-0.16□□□□□ -2.44
SSR2P43308 SEPT7P4-201ENST00000437076 306 ntBASIC-0.16□□□□□ -2.44
SSR2P43308 SUMO1P2-201ENST00000452524 304 ntBASIC-0.16□□□□□ -2.44
SSR2P43308 PCMTD1P1-201ENST00000455560 355 ntBASIC-0.16□□□□□ -2.44
SSR2P43308 RNA5SP401-201ENST00000515920 127 ntBASIC-0.16□□□□□ -2.44
SSR2P43308 RNA5SP480-201ENST00000516840 109 ntBASIC-0.16□□□□□ -2.44
SSR2P43308 SCARNA1-201ENST00000517138 166 ntBASIC-0.16□□□□□ -2.44
SSR2P43308 MIR4771-2-201ENST00000577758 74 ntBASIC-0.16□□□□□ -2.44
SSR2P43308 MIR4771-1-201ENST00000582617 74 ntBASIC-0.16□□□□□ -2.44
SSR2P43308 MIR4676-201ENST00000583078 72 ntBASIC-0.16□□□□□ -2.44
SSR2P43308 SNORD114-26-201ENST00000363543 72 ntBASIC-0.17□□□□□ -2.44
SSR2P43308 Y_RNA.381-201ENST00000365666 102 ntBASIC-0.17□□□□□ -2.44
SSR2P43308 RNU6-128P-201ENST00000383976 107 ntBASIC-0.17□□□□□ -2.44
SSR2P43308 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.17□□□□□ -2.44
SSR2P43308 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.17□□□□□ -2.44
SSR2P43308 HMGN2P32-201ENST00000444648 269 ntBASIC-0.17□□□□□ -2.44
SSR2P43308 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.17□□□□□ -2.44
SSR2P43308 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.17□□□□□ -2.44
SSR2P43308 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.17□□□□□ -2.44
SSR2P43308 RNU6-1114P-201ENST00000516022 107 ntBASIC-0.17□□□□□ -2.44
SSR2P43308 RNA5SP330-201ENST00000517096 96 ntBASIC-0.17□□□□□ -2.44
SSR2P43308 POLR3GP2-201ENST00000588366 668 ntBASIC-0.17□□□□□ -2.44
SSR2P43308 AC020891.4-201ENST00000605745 93 ntBASIC-0.17□□□□□ -2.44
SSR2P43308 AC007494.3-201ENST00000624660 743 ntBASIC-0.17□□□□□ -2.44
SSR2P43308 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.18□□□□□ -2.44
SSR2P43308 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.18□□□□□ -2.44
SSR2P43308 SNORD37.1-201ENST00000390968 65 ntBASIC-0.18□□□□□ -2.44
SSR2P43308 SNORA26.8-201ENST00000391306 124 ntBASIC-0.18□□□□□ -2.44
SSR2P43308 RNU2-54P-201ENST00000410299 190 ntBASIC-0.18□□□□□ -2.44
SSR2P43308 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.18□□□□□ -2.44
SSR2P43308 AC015818.7-201ENST00000428754 109 ntBASIC-0.18□□□□□ -2.44
SSR2P43308 AL353997.1-201ENST00000432936 108 ntBASIC-0.18□□□□□ -2.44
SSR2P43308 AC087499.7-201ENST00000441958 109 ntBASIC-0.18□□□□□ -2.44
SSR2P43308 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.18□□□□□ -2.44
SSR2P43308 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.18□□□□□ -2.44
SSR2P43308 MTND3P3-201ENST00000505004 126 ntBASIC-0.18□□□□□ -2.44
SSR2P43308 AC010486.3-201ENST00000511602 785 ntBASIC-0.18□□□□□ -2.44
SSR2P43308 RNU7-175P-201ENST00000515915 61 ntBASIC-0.18□□□□□ -2.44
SSR2P43308 AC141557.1-201ENST00000540982 400 ntBASIC-0.18□□□□□ -2.44
SSR2P43308 AC093023.1-201ENST00000547375 507 ntBASIC-0.18□□□□□ -2.44
SSR2P43308 DLEU2_5.1-201ENST00000615567 84 ntBASIC-0.18□□□□□ -2.44
SSR2P43308 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.18□□□□□ -2.44
SSR2P43308 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.18□□□□□ -2.44
SSR2P43308 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.18□□□□□ -2.44
SSR2P43308 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.19□□□□□ -2.44
SSR2P43308 RNU6-454P-201ENST00000364292 107 ntBASIC-0.19□□□□□ -2.44
SSR2P43308 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.19□□□□□ -2.44
SSR2P43308 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.19□□□□□ -2.44
SSR2P43308 SNORD50B-201ENST00000364995 70 ntBASIC-0.19□□□□□ -2.44
SSR2P43308 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.19□□□□□ -2.44
SSR2P43308 MIR329-1-201ENST00000385028 80 ntBASIC-0.19□□□□□ -2.44
SSR2P43308 MIR514A2-201ENST00000385131 88 ntBASIC-0.19□□□□□ -2.44
SSR2P43308 MIR514A3-201ENST00000385132 88 ntBASIC-0.19□□□□□ -2.44
SSR2P43308 RNA5SP496-201ENST00000391240 109 ntBASIC-0.19□□□□□ -2.44
SSR2P43308 RNU2-59P-201ENST00000410482 191 ntBASIC-0.19□□□□□ -2.44
SSR2P43308 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.19□□□□□ -2.44
SSR2P43308 MTND3P23-201ENST00000431980 347 ntBASIC-0.19□□□□□ -2.44
SSR2P43308 UQCRBP2-201ENST00000447827 297 ntBASIC-0.19□□□□□ -2.44
SSR2P43308 MTND1P27-201ENST00000451117 902 ntBASIC-0.19□□□□□ -2.44
SSR2P43308 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.19□□□□□ -2.44
SSR2P43308 MTND1P11-201ENST00000456661 876 ntBASIC-0.19□□□□□ -2.44
SSR2P43308 RNU6-329P-201ENST00000459618 107 ntBASIC-0.19□□□□□ -2.44
SSR2P43308 SNORA25.10-201ENST00000515926 124 ntBASIC-0.19□□□□□ -2.44
SSR2P43308 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.19□□□□□ -2.44
SSR2P43308 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.19□□□□□ -2.44
SSR2P43308 RPL23AP91-201ENST00000569211 455 ntBASIC-0.19□□□□□ -2.44
SSR2P43308 AC090897.1-201ENST00000580909 226 ntBASIC-0.19□□□□□ -2.44
SSR2P43308 AL357075.2-201ENST00000614906 189 ntBASIC-0.19□□□□□ -2.44
SSR2P43308 AC099654.12-201ENST00000639868 649 ntBASIC-0.19□□□□□ -2.44
SSR2P43308 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.2□□□□□ -2.44
SSR2P43308 SNORD114-5-201ENST00000362928 70 ntBASIC-0.2□□□□□ -2.44
SSR2P43308 RNU6-254P-201ENST00000363377 107 ntBASIC-0.2□□□□□ -2.44
SSR2P43308 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.2□□□□□ -2.44
SSR2P43308 RNU6-522P-201ENST00000364497 107 ntBASIC-0.2□□□□□ -2.44
SSR2P43308 Y_RNA.405-201ENST00000383979 100 ntBASIC-0.2□□□□□ -2.44
SSR2P43308 Y_RNA.451-201ENST00000384200 100 ntBASIC-0.2□□□□□ -2.44
SSR2P43308 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.2□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms