Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.56□□□□□ -2.32
BRCA1P38398 AC093850.1-201ENST00000454121 251 ntBASIC0.56□□□□□ -2.32
BRCA1P38398 SNORD124-201ENST00000459577 104 ntBASIC0.56□□□□□ -2.32
BRCA1P38398 PDCD5P2-201ENST00000507570 312 ntBASIC0.56□□□□□ -2.32
BRCA1P38398 SNORD111.1-201ENST00000516421 86 ntBASIC0.56□□□□□ -2.32
BRCA1P38398 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.56□□□□□ -2.32
BRCA1P38398 MIR3684-201ENST00000579779 74 ntBASIC0.56□□□□□ -2.32
BRCA1P38398 AC103591.3-201ENST00000608684 209 ntBASIC0.56□□□□□ -2.32
BRCA1P38398 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.56□□□□□ -2.32
BRCA1P38398 RNU6-969P-201ENST00000383900 105 ntBASIC0.55□□□□□ -2.32
BRCA1P38398 RNU6-842P-201ENST00000384269 107 ntBASIC0.55□□□□□ -2.32
BRCA1P38398 RNU6-35P-201ENST00000384530 107 ntBASIC0.55□□□□□ -2.32
BRCA1P38398 SNORA12.1-201ENST00000390873 148 ntBASIC0.55□□□□□ -2.32
BRCA1P38398 MTND1P29-201ENST00000448112 647 ntBASIC0.55□□□□□ -2.32
BRCA1P38398 RNU7-21P-201ENST00000459430 62 ntBASIC0.55□□□□□ -2.32
BRCA1P38398 AC093534.1-201ENST00000504977 132 ntBASIC0.55□□□□□ -2.32
BRCA1P38398 AC091144.1-201ENST00000519573 138 ntBASIC0.55□□□□□ -2.32
BRCA1P38398 AC024909.2-201ENST00000553035 286 ntBASIC0.55□□□□□ -2.32
BRCA1P38398 MIR4514-201ENST00000581410 57 ntBASIC0.55□□□□□ -2.32
BRCA1P38398 MIR3662-201ENST00000637030 95 ntBASIC0.55□□□□□ -2.32
BRCA1P38398 MIR520C-201ENST00000385005 87 ntBASIC0.54□□□□□ -2.32
BRCA1P38398 EIF1P2-201ENST00000428233 350 ntBASIC0.54□□□□□ -2.32
BRCA1P38398 USP9YP16-201ENST00000430287 407 ntBASIC0.54□□□□□ -2.32
BRCA1P38398 AC002429.1-201ENST00000437672 148 ntBASIC0.54□□□□□ -2.32
BRCA1P38398 USP9YP23-201ENST00000455085 407 ntBASIC0.54□□□□□ -2.32
BRCA1P38398 Y_RNA.704-201ENST00000516851 102 ntBASIC0.54□□□□□ -2.32
BRCA1P38398 RNU6-273P-201ENST00000516937 96 ntBASIC0.54□□□□□ -2.32
BRCA1P38398 RNU6-835P-201ENST00000516974 104 ntBASIC0.54□□□□□ -2.32
BRCA1P38398 Y_RNA.714-201ENST00000517065 90 ntBASIC0.54□□□□□ -2.32
BRCA1P38398 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.54□□□□□ -2.32
BRCA1P38398 AC090617.3-201ENST00000573670 475 ntBASIC0.54□□□□□ -2.32
BRCA1P38398 AC005899.2-201ENST00000584353 90 ntBASIC0.54□□□□□ -2.32
BRCA1P38398 MIR6128-201ENST00000615528 109 ntBASIC0.54□□□□□ -2.32
BRCA1P38398 SNORD68-201ENST00000363214 84 ntBASIC0.54□□□□□ -2.32
BRCA1P38398 SNORD113.3-201ENST00000364630 78 ntBASIC0.54□□□□□ -2.32
BRCA1P38398 Y_RNA.301-201ENST00000364990 103 ntBASIC0.54□□□□□ -2.32
BRCA1P38398 MIR520G-201ENST00000385064 90 ntBASIC0.54□□□□□ -2.32
BRCA1P38398 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.54□□□□□ -2.32
BRCA1P38398 PIGPP3-201ENST00000425307 415 ntBASIC0.54□□□□□ -2.32
BRCA1P38398 USP9YP30-201ENST00000430729 455 ntBASIC0.54□□□□□ -2.32
BRCA1P38398 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.54□□□□□ -2.32
BRCA1P38398 snoU13.25-201ENST00000458945 104 ntBASIC0.54□□□□□ -2.32
BRCA1P38398 RPL17P19-201ENST00000489069 552 ntBASIC0.54□□□□□ -2.32
BRCA1P38398 AC022493.2-201ENST00000506122 481 ntBASIC0.54□□□□□ -2.32
BRCA1P38398 RNU7-128P-201ENST00000517247 62 ntBASIC0.54□□□□□ -2.32
BRCA1P38398 MIR3942-201ENST00000585264 109 ntBASIC0.54□□□□□ -2.32
BRCA1P38398 AL117336.2-201ENST00000602435 335 ntBASIC0.54□□□□□ -2.32
BRCA1P38398 AC080078.2-201ENST00000603766 501 ntBASIC0.54□□□□□ -2.32
BRCA1P38398 AC007014.2-201ENST00000615581 479 ntBASIC0.54□□□□□ -2.32
BRCA1P38398 MIR103A2-201ENST00000362154 78 ntBASIC0.53□□□□□ -2.32
BRCA1P38398 RNU6-451P-201ENST00000362921 107 ntBASIC0.53□□□□□ -2.32
BRCA1P38398 Y_RNA.135-201ENST00000363439 95 ntBASIC0.53□□□□□ -2.32
BRCA1P38398 RNU6-1090P-201ENST00000364065 94 ntBASIC0.53□□□□□ -2.32
BRCA1P38398 Y_RNA.358-201ENST00000365491 99 ntBASIC0.53□□□□□ -2.32
BRCA1P38398 RNU6-700P-201ENST00000391043 107 ntBASIC0.53□□□□□ -2.32
BRCA1P38398 MIR1185-1-201ENST00000408598 86 ntBASIC0.53□□□□□ -2.32
BRCA1P38398 MIR1912-201ENST00000410389 80 ntBASIC0.53□□□□□ -2.32
BRCA1P38398 COX6CP6-201ENST00000490840 228 ntBASIC0.53□□□□□ -2.32
BRCA1P38398 RNU6-864P-201ENST00000516256 108 ntBASIC0.53□□□□□ -2.32
BRCA1P38398 RNU2-56P-201ENST00000516826 190 ntBASIC0.53□□□□□ -2.32
BRCA1P38398 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.53□□□□□ -2.32
BRCA1P38398 AC073349.3-201ENST00000617616 186 ntBASIC0.53□□□□□ -2.32
BRCA1P38398 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.53□□□□□ -2.33
BRCA1P38398 Y_RNA.615-201ENST00000410769 117 ntBASIC0.52□□□□□ -2.33
BRCA1P38398 RNU6-1114P-201ENST00000516022 107 ntBASIC0.52□□□□□ -2.33
BRCA1P38398 AC105029.1-201ENST00000520250 669 ntBASIC0.52□□□□□ -2.33
BRCA1P38398 AC134698.4-201ENST00000523451 826 ntBASIC0.52□□□□□ -2.33
BRCA1P38398 AC004817.2-201ENST00000561794 651 ntBASIC0.52□□□□□ -2.33
BRCA1P38398 AC104695.3-201ENST00000604052 296 ntBASIC0.52□□□□□ -2.33
BRCA1P38398 AC015540.1-201ENST00000615828 501 ntBASIC0.52□□□□□ -2.33
BRCA1P38398 U6.115-201ENST00000636045 103 ntBASIC0.52□□□□□ -2.33
BRCA1P38398 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
BRCA1P38398 Y_RNA.157-201ENST00000363638 102 ntBASIC0.52□□□□□ -2.33
BRCA1P38398 RNU4-67P-201ENST00000364569 141 ntBASIC0.52□□□□□ -2.33
BRCA1P38398 RNU4-12P-201ENST00000365233 139 ntBASIC0.52□□□□□ -2.33
BRCA1P38398 RNU6-1310P-201ENST00000384153 107 ntBASIC0.52□□□□□ -2.33
BRCA1P38398 RNU6-95P-201ENST00000384697 107 ntBASIC0.52□□□□□ -2.33
BRCA1P38398 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.52□□□□□ -2.33
BRCA1P38398 AC018865.2-201ENST00000423631 129 ntBASIC0.52□□□□□ -2.33
BRCA1P38398 AL392103.1-201ENST00000447000 198 ntBASIC0.52□□□□□ -2.33
BRCA1P38398 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.52□□□□□ -2.33
BRCA1P38398 RNU6-329P-201ENST00000459618 107 ntBASIC0.52□□□□□ -2.33
BRCA1P38398 SNORA70.12-201ENST00000516084 153 ntBASIC0.52□□□□□ -2.33
BRCA1P38398 RNU6-107P-201ENST00000516643 102 ntBASIC0.52□□□□□ -2.33
BRCA1P38398 MIR3192-201ENST00000584920 77 ntBASIC0.52□□□□□ -2.33
BRCA1P38398 MIR4762-201ENST00000585261 75 ntBASIC0.52□□□□□ -2.33
BRCA1P38398 MIR6718-201ENST00000616153 80 ntBASIC0.52□□□□□ -2.33
BRCA1P38398 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.51□□□□□ -2.33
BRCA1P38398 SNORD116-2-201ENST00000384274 95 ntBASIC0.51□□□□□ -2.33
BRCA1P38398 RNU6-163P-201ENST00000384396 106 ntBASIC0.51□□□□□ -2.33
BRCA1P38398 SNORD116-6-201ENST00000384711 96 ntBASIC0.51□□□□□ -2.33
BRCA1P38398 MTATP6P17-201ENST00000431030 672 ntBASIC0.51□□□□□ -2.33
BRCA1P38398 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.51□□□□□ -2.33
BRCA1P38398 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.51□□□□□ -2.33
BRCA1P38398 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
BRCA1P38398 Y_RNA.243-201ENST00000364481 109 ntBASIC0.5□□□□□ -2.33
BRCA1P38398 SNORA20B-201ENST00000384220 132 ntBASIC0.5□□□□□ -2.33
BRCA1P38398 MIR526A1-201ENST00000384897 85 ntBASIC0.5□□□□□ -2.33
BRCA1P38398 RNU6-908P-201ENST00000410160 94 ntBASIC0.5□□□□□ -2.33
BRCA1P38398 AC006461.1-201ENST00000412637 326 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms