Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 RNU6-197P-201ENST00000516680 100 ntBASIC0.83□□□□□ -2.28
SOX6P35712 RNU2-12P-201ENST00000517216 168 ntBASIC0.83□□□□□ -2.28
SOX6P35712 MTND4LP26-201ENST00000518144 282 ntBASIC0.83□□□□□ -2.28
SOX6P35712 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.83□□□□□ -2.28
SOX6P35712 AL117336.2-201ENST00000602435 335 ntBASIC0.83□□□□□ -2.28
SOX6P35712 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.83□□□□□ -2.28
SOX6P35712 AC087588.2-201ENST00000617667 426 ntBASIC0.83□□□□□ -2.28
SOX6P35712 CASC19-280ENST00000642102 1351 ntBASIC0.83□□□□□ -2.28
SOX6P35712 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
SOX6P35712 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.82□□□□□ -2.28
SOX6P35712 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
SOX6P35712 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
SOX6P35712 RNU6-99P-201ENST00000364721 107 ntBASIC0.82□□□□□ -2.28
SOX6P35712 RNU6-969P-201ENST00000383900 105 ntBASIC0.82□□□□□ -2.28
SOX6P35712 SNORA75.6-201ENST00000391318 127 ntBASIC0.82□□□□□ -2.28
SOX6P35712 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.82□□□□□ -2.28
SOX6P35712 RNU4-14P-201ENST00000410858 122 ntBASIC0.82□□□□□ -2.28
SOX6P35712 PDCL2P1-201ENST00000419302 352 ntBASIC0.82□□□□□ -2.28
SOX6P35712 MTND4P28-201ENST00000426217 387 ntBASIC0.82□□□□□ -2.28
SOX6P35712 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.82□□□□□ -2.28
SOX6P35712 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.82□□□□□ -2.28
SOX6P35712 Y_RNA.635-201ENST00000459041 101 ntBASIC0.82□□□□□ -2.28
SOX6P35712 RNU7-21P-201ENST00000459430 62 ntBASIC0.82□□□□□ -2.28
SOX6P35712 RPS26P48-201ENST00000491713 339 ntBASIC0.82□□□□□ -2.28
SOX6P35712 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.82□□□□□ -2.28
SOX6P35712 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.82□□□□□ -2.28
SOX6P35712 AC136628.3-201ENST00000521868 290 ntBASIC0.82□□□□□ -2.28
SOX6P35712 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.82□□□□□ -2.28
SOX6P35712 AC004832.4-201ENST00000608952 331 ntBASIC0.82□□□□□ -2.28
SOX6P35712 AC092794.1-201ENST00000612734 582 ntBASIC0.82□□□□□ -2.28
SOX6P35712 MIR1244-1-201ENST00000612829 85 ntBASIC0.82□□□□□ -2.28
SOX6P35712 U6atac.1-201ENST00000616025 117 ntBASIC0.82□□□□□ -2.28
SOX6P35712 AC022306.2-201ENST00000617563 647 ntBASIC0.82□□□□□ -2.28
SOX6P35712 AC098679.4-201ENST00000624241 654 ntBASIC0.82□□□□□ -2.28
SOX6P35712 MIR1244-3-201ENST00000635744 85 ntBASIC0.82□□□□□ -2.28
SOX6P35712 MIR1244-2-201ENST00000636449 85 ntBASIC0.82□□□□□ -2.28
SOX6P35712 MIR1244-4-202ENST00000636813 85 ntBASIC0.82□□□□□ -2.28
SOX6P35712 Y_RNA.160-201ENST00000363677 92 ntBASIC0.81□□□□□ -2.28
SOX6P35712 SNORD115-30-201ENST00000364117 82 ntBASIC0.81□□□□□ -2.28
SOX6P35712 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
SOX6P35712 SNORA69.1-201ENST00000390904 137 ntBASIC0.81□□□□□ -2.28
SOX6P35712 MIR891A-201ENST00000401237 79 ntBASIC0.81□□□□□ -2.28
SOX6P35712 Y_RNA.592-201ENST00000410274 109 ntBASIC0.81□□□□□ -2.28
SOX6P35712 RPL23AP50-201ENST00000434149 455 ntBASIC0.81□□□□□ -2.28
SOX6P35712 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.81□□□□□ -2.28
SOX6P35712 Z98949.2-201ENST00000440996 144 ntBASIC0.81□□□□□ -2.28
SOX6P35712 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.81□□□□□ -2.28
SOX6P35712 AC233266.1-201ENST00000454518 96 ntBASIC0.81□□□□□ -2.28
SOX6P35712 RNU6-1096P-201ENST00000517089 102 ntBASIC0.81□□□□□ -2.28
SOX6P35712 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.81□□□□□ -2.28
SOX6P35712 PRELID3BP2-201ENST00000605362 201 ntBASIC0.81□□□□□ -2.28
SOX6P35712 AC242852.1-201ENST00000612151 96 ntBASIC0.81□□□□□ -2.28
SOX6P35712 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
SOX6P35712 AC244015.1-201ENST00000622301 99 ntBASIC0.81□□□□□ -2.28
SOX6P35712 HSBP1P2-201ENST00000299671 229 ntBASIC0.8□□□□□ -2.28
SOX6P35712 RNU6-833P-201ENST00000363486 107 ntBASIC0.8□□□□□ -2.28
SOX6P35712 RNU6-1188P-201ENST00000363795 107 ntBASIC0.8□□□□□ -2.28
SOX6P35712 SNORD114-2-201ENST00000363953 78 ntBASIC0.8□□□□□ -2.28
SOX6P35712 RNU4-41P-201ENST00000364426 143 ntBASIC0.8□□□□□ -2.28
SOX6P35712 SNORD116-13-201ENST00000384408 92 ntBASIC0.8□□□□□ -2.28
SOX6P35712 MIR625-201ENST00000385047 85 ntBASIC0.8□□□□□ -2.28
SOX6P35712 MT-TL1-201ENST00000386347 75 ntBASIC0.8□□□□□ -2.28
SOX6P35712 RNU6-1156P-201ENST00000410365 100 ntBASIC0.8□□□□□ -2.28
SOX6P35712 AL606490.4-201ENST00000423117 127 ntBASIC0.8□□□□□ -2.28
SOX6P35712 AL162725.1-201ENST00000435405 301 ntBASIC0.8□□□□□ -2.28
SOX6P35712 AC245047.8-201ENST00000456455 284 ntBASIC0.8□□□□□ -2.28
SOX6P35712 SNORA70.12-201ENST00000516084 153 ntBASIC0.8□□□□□ -2.28
SOX6P35712 SNORD111.1-201ENST00000516421 86 ntBASIC0.8□□□□□ -2.28
SOX6P35712 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.8□□□□□ -2.28
SOX6P35712 FAM106DP-201ENST00000586416 501 ntBASIC0.8□□□□□ -2.28
SOX6P35712 AC027279.3-201ENST00000625055 122 ntBASIC0.8□□□□□ -2.28
SOX6P35712 Y_RNA.248-201ENST00000364501 109 ntBASIC0.79□□□□□ -2.28
SOX6P35712 SNORD81.2-201ENST00000365153 76 ntBASIC0.79□□□□□ -2.28
SOX6P35712 RNY3P4-201ENST00000384428 101 ntBASIC0.79□□□□□ -2.28
SOX6P35712 Y_RNA.505-201ENST00000384489 102 ntBASIC0.79□□□□□ -2.28
SOX6P35712 RNU6-310P-201ENST00000384655 107 ntBASIC0.79□□□□□ -2.28
SOX6P35712 Y_RNA.646-201ENST00000410980 101 ntBASIC0.79□□□□□ -2.28
SOX6P35712 RPEP5-201ENST00000441137 268 ntBASIC0.79□□□□□ -2.28
SOX6P35712 RPS4XP11-201ENST00000446897 772 ntBASIC0.79□□□□□ -2.28
SOX6P35712 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.79□□□□□ -2.28
SOX6P35712 RNU6-408P-201ENST00000515910 100 ntBASIC0.79□□□□□ -2.28
SOX6P35712 RNU6-1213P-201ENST00000517075 94 ntBASIC0.79□□□□□ -2.28
SOX6P35712 RNU6-264P-201ENST00000517134 104 ntBASIC0.79□□□□□ -2.28
SOX6P35712 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.79□□□□□ -2.28
SOX6P35712 MIR5690-201ENST00000583739 73 ntBASIC0.79□□□□□ -2.28
SOX6P35712 MIR4781-201ENST00000585250 76 ntBASIC0.79□□□□□ -2.28
SOX6P35712 AC004467.1-201ENST00000615678 330 ntBASIC0.79□□□□□ -2.28
SOX6P35712 TPTEP1-208ENST00000636884 213 ntBASIC0.79□□□□□ -2.28
SOX6P35712 RNU6-961P-201ENST00000363893 105 ntBASIC0.78□□□□□ -2.28
SOX6P35712 SNORA75.2-201ENST00000391138 150 ntBASIC0.78□□□□□ -2.28
SOX6P35712 SNORA75.3-201ENST00000391231 150 ntBASIC0.78□□□□□ -2.28
SOX6P35712 AC006461.1-201ENST00000412637 326 ntBASIC0.78□□□□□ -2.28
SOX6P35712 AL354751.2-201ENST00000415471 210 ntBASIC0.78□□□□□ -2.28
SOX6P35712 MTND1P2-201ENST00000430604 821 ntBASIC0.78□□□□□ -2.28
SOX6P35712 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.78□□□□□ -2.28
SOX6P35712 FABP5P4-201ENST00000437203 171 ntBASIC0.78□□□□□ -2.28
SOX6P35712 FCF1P4-201ENST00000448326 183 ntBASIC0.78□□□□□ -2.28
SOX6P35712 ELOCP24-201ENST00000456370 334 ntBASIC0.78□□□□□ -2.28
SOX6P35712 MTND4P17-201ENST00000470444 350 ntBASIC0.78□□□□□ -2.28
SOX6P35712 CYCTP-201ENST00000504253 315 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms