Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 ACA64.5-201ENST00000516207 127 ntBASIC0.82□□□□□ -2.28
RORAP35398 RNU6-947P-201ENST00000516264 106 ntBASIC0.82□□□□□ -2.28
RORAP35398 RNU6-1213P-201ENST00000517075 94 ntBASIC0.82□□□□□ -2.28
RORAP35398 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.82□□□□□ -2.28
RORAP35398 CYP3A137P-201ENST00000562436 69 ntBASIC0.82□□□□□ -2.28
RORAP35398 AC055872.1-201ENST00000570978 278 ntBASIC0.82□□□□□ -2.28
RORAP35398 MIR4698-201ENST00000577795 80 ntBASIC0.82□□□□□ -2.28
RORAP35398 AL357312.1-201ENST00000603879 298 ntBASIC0.82□□□□□ -2.28
RORAP35398 FAM71BP1-201ENST00000604431 523 ntBASIC0.82□□□□□ -2.28
RORAP35398 MIR1244-1-201ENST00000612829 85 ntBASIC0.82□□□□□ -2.28
RORAP35398 AC127459.3-201ENST00000624328 466 ntBASIC0.82□□□□□ -2.28
RORAP35398 MIR1244-3-201ENST00000635744 85 ntBASIC0.82□□□□□ -2.28
RORAP35398 MIR1244-2-201ENST00000636449 85 ntBASIC0.82□□□□□ -2.28
RORAP35398 MIR1244-4-202ENST00000636813 85 ntBASIC0.82□□□□□ -2.28
RORAP35398 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
RORAP35398 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
RORAP35398 RNU6-969P-201ENST00000383900 105 ntBASIC0.81□□□□□ -2.28
RORAP35398 RNA5SP482-201ENST00000391269 118 ntBASIC0.81□□□□□ -2.28
RORAP35398 RNU4-14P-201ENST00000410858 122 ntBASIC0.81□□□□□ -2.28
RORAP35398 AC114482.1-201ENST00000418010 247 ntBASIC0.81□□□□□ -2.28
RORAP35398 AC092423.1-201ENST00000430165 186 ntBASIC0.81□□□□□ -2.28
RORAP35398 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.81□□□□□ -2.28
RORAP35398 AC104332.1-201ENST00000440471 797 ntBASIC0.81□□□□□ -2.28
RORAP35398 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.81□□□□□ -2.28
RORAP35398 AC107399.1-201ENST00000451226 265 ntBASIC0.81□□□□□ -2.28
RORAP35398 RPL39P39-201ENST00000455840 151 ntBASIC0.81□□□□□ -2.28
RORAP35398 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.81□□□□□ -2.28
RORAP35398 AC116353.2-201ENST00000505332 712 ntBASIC0.81□□□□□ -2.28
RORAP35398 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.81□□□□□ -2.28
RORAP35398 RNU6-120P-201ENST00000516077 103 ntBASIC0.81□□□□□ -2.28
RORAP35398 RNU6-358P-201ENST00000516564 75 ntBASIC0.81□□□□□ -2.28
RORAP35398 RNU6-1096P-201ENST00000517089 102 ntBASIC0.81□□□□□ -2.28
RORAP35398 AL096861.1-201ENST00000610899 123 ntBASIC0.81□□□□□ -2.28
RORAP35398 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.81□□□□□ -2.28
RORAP35398 RNU6-136P-201ENST00000384663 107 ntBASIC0.8□□□□□ -2.28
RORAP35398 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
RORAP35398 SNORD12B-201ENST00000410433 91 ntBASIC0.8□□□□□ -2.28
RORAP35398 UBE2V1P7-201ENST00000446395 340 ntBASIC0.8□□□□□ -2.28
RORAP35398 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.8□□□□□ -2.28
RORAP35398 AC068790.6-201ENST00000602558 258 ntBASIC0.8□□□□□ -2.28
RORAP35398 AC108706.1-201ENST00000611053 297 ntBASIC0.8□□□□□ -2.28
RORAP35398 AC092794.2-201ENST00000620933 563 ntBASIC0.8□□□□□ -2.28
RORAP35398 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
RORAP35398 RNU6-961P-201ENST00000363893 105 ntBASIC0.79□□□□□ -2.28
RORAP35398 SNORD115-30-201ENST00000364117 82 ntBASIC0.79□□□□□ -2.28
RORAP35398 RNU6-99P-201ENST00000364721 107 ntBASIC0.79□□□□□ -2.28
RORAP35398 SNORD114-24-201ENST00000365029 72 ntBASIC0.79□□□□□ -2.28
RORAP35398 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
RORAP35398 SNORA75.4-201ENST00000391278 119 ntBASIC0.79□□□□□ -2.28
RORAP35398 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.79□□□□□ -2.28
RORAP35398 MTND1P4-201ENST00000435196 415 ntBASIC0.79□□□□□ -2.28
RORAP35398 AC233266.1-201ENST00000454518 96 ntBASIC0.79□□□□□ -2.28
RORAP35398 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.79□□□□□ -2.28
RORAP35398 PSMC1P5-201ENST00000512850 177 ntBASIC0.79□□□□□ -2.28
RORAP35398 RNU2-12P-201ENST00000517216 168 ntBASIC0.79□□□□□ -2.28
RORAP35398 AC004832.4-201ENST00000608952 331 ntBASIC0.79□□□□□ -2.28
RORAP35398 AC242852.1-201ENST00000612151 96 ntBASIC0.79□□□□□ -2.28
RORAP35398 AC244015.1-201ENST00000622301 99 ntBASIC0.79□□□□□ -2.28
RORAP35398 AL008636.1-201ENST00000625038 1018 ntBASIC0.79□□□□□ -2.28
RORAP35398 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.78□□□□□ -2.28
RORAP35398 RNY1-201ENST00000364228 113 ntBASIC0.78□□□□□ -2.28
RORAP35398 MIR520G-201ENST00000385064 90 ntBASIC0.78□□□□□ -2.28
RORAP35398 MIR146A-201ENST00000385201 99 ntBASIC0.78□□□□□ -2.28
RORAP35398 RNA5SP511-201ENST00000410487 115 ntBASIC0.78□□□□□ -2.28
RORAP35398 RNA5SP475-201ENST00000410568 110 ntBASIC0.78□□□□□ -2.28
RORAP35398 AL354751.2-201ENST00000415471 210 ntBASIC0.78□□□□□ -2.28
RORAP35398 AC004941.2-201ENST00000427009 228 ntBASIC0.78□□□□□ -2.28
RORAP35398 MTND4P17-201ENST00000470444 350 ntBASIC0.78□□□□□ -2.28
RORAP35398 RPL17P19-201ENST00000489069 552 ntBASIC0.78□□□□□ -2.28
RORAP35398 PDCD5P2-201ENST00000507570 312 ntBASIC0.78□□□□□ -2.28
RORAP35398 RNU6-351P-201ENST00000516097 100 ntBASIC0.78□□□□□ -2.28
RORAP35398 RNU7-30P-201ENST00000516835 62 ntBASIC0.78□□□□□ -2.28
RORAP35398 AL358944.1-201ENST00000528537 144 ntBASIC0.78□□□□□ -2.28
RORAP35398 MIR5000-201ENST00000577717 103 ntBASIC0.78□□□□□ -2.28
RORAP35398 MIR3192-201ENST00000584920 77 ntBASIC0.78□□□□□ -2.28
RORAP35398 AC013244.2-201ENST00000603396 103 ntBASIC0.78□□□□□ -2.28
RORAP35398 PRELID3BP2-201ENST00000605362 201 ntBASIC0.78□□□□□ -2.28
RORAP35398 AC087588.2-201ENST00000617667 426 ntBASIC0.78□□□□□ -2.28
RORAP35398 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
RORAP35398 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
RORAP35398 SNORD114-7-201ENST00000362520 77 ntBASIC0.77□□□□□ -2.29
RORAP35398 Y_RNA.72-201ENST00000362894 103 ntBASIC0.77□□□□□ -2.29
RORAP35398 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
RORAP35398 SNORA80D-201ENST00000384488 135 ntBASIC0.77□□□□□ -2.29
RORAP35398 SNORA75.2-201ENST00000391138 150 ntBASIC0.77□□□□□ -2.29
RORAP35398 SNORA75.3-201ENST00000391231 150 ntBASIC0.77□□□□□ -2.29
RORAP35398 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.77□□□□□ -2.29
RORAP35398 MTND1P34-201ENST00000438556 671 ntBASIC0.77□□□□□ -2.29
RORAP35398 FGF7P6-202ENST00000451282 293 ntBASIC0.77□□□□□ -2.29
RORAP35398 SUMO1P2-201ENST00000452524 304 ntBASIC0.77□□□□□ -2.29
RORAP35398 AC023442.1-201ENST00000531247 422 ntBASIC0.77□□□□□ -2.29
RORAP35398 MIR4653-201ENST00000585107 83 ntBASIC0.77□□□□□ -2.29
RORAP35398 AC011712.1-201ENST00000588959 234 ntBASIC0.77□□□□□ -2.29
RORAP35398 AL669831.3-213ENST00000636676 183 ntBASIC0.77□□□□□ -2.29
RORAP35398 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
RORAP35398 RNU6-833P-201ENST00000363486 107 ntBASIC0.76□□□□□ -2.29
RORAP35398 MIR200A-201ENST00000384875 90 ntBASIC0.76□□□□□ -2.29
RORAP35398 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.76□□□□□ -2.29
RORAP35398 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.76□□□□□ -2.29
RORAP35398 PDCL2P1-201ENST00000419302 352 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms