Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 MIR329-1-201ENST00000385028 80 ntBASIC0.15□□□□□ -2.39
RPA3P35244 MIR613-201ENST00000385248 95 ntBASIC0.15□□□□□ -2.39
RPA3P35244 Y_RNA.615-201ENST00000410769 117 ntBASIC0.15□□□□□ -2.39
RPA3P35244 USMG5P1-201ENST00000425964 177 ntBASIC0.15□□□□□ -2.39
RPA3P35244 ELOCP24-201ENST00000456370 334 ntBASIC0.15□□□□□ -2.39
RPA3P35244 SNORD123-201ENST00000459473 70 ntBASIC0.15□□□□□ -2.39
RPA3P35244 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.15□□□□□ -2.39
RPA3P35244 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.15□□□□□ -2.39
RPA3P35244 MIR4762-201ENST00000585261 75 ntBASIC0.15□□□□□ -2.39
RPA3P35244 AC011712.1-201ENST00000588959 234 ntBASIC0.15□□□□□ -2.39
RPA3P35244 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.15□□□□□ -2.39
RPA3P35244 RNU6-454P-201ENST00000364292 107 ntBASIC0.14□□□□□ -2.39
RPA3P35244 AC005534.2-201ENST00000431047 433 ntBASIC0.14□□□□□ -2.39
RPA3P35244 MTCO3P10-201ENST00000455912 772 ntBASIC0.14□□□□□ -2.39
RPA3P35244 AC074133.1-201ENST00000515696 183 ntBASIC0.14□□□□□ -2.39
RPA3P35244 AL158211.1-201ENST00000566763 763 ntBASIC0.14□□□□□ -2.39
RPA3P35244 MIR4273-201ENST00000582824 84 ntBASIC0.14□□□□□ -2.39
RPA3P35244 AC010525.2-201ENST00000590920 195 ntBASIC0.14□□□□□ -2.39
RPA3P35244 AC119751.7-201ENST00000600494 245 ntBASIC0.14□□□□□ -2.39
RPA3P35244 AL162730.1-201ENST00000605734 292 ntBASIC0.14□□□□□ -2.39
RPA3P35244 AC005828.6-201ENST00000606610 232 ntBASIC0.14□□□□□ -2.39
RPA3P35244 AF250324.2-201ENST00000608299 610 ntBASIC0.14□□□□□ -2.39
RPA3P35244 AC023510.2-201ENST00000622162 746 ntBASIC0.14□□□□□ -2.39
RPA3P35244 MIR4251-201ENST00000635819 61 ntBASIC0.14□□□□□ -2.39
RPA3P35244 AC068137.3-201ENST00000639191 341 ntBASIC0.14□□□□□ -2.39
RPA3P35244 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.13□□□□□ -2.39
RPA3P35244 MIR18A-201ENST00000362310 71 ntBASIC0.13□□□□□ -2.39
RPA3P35244 RNU6-349P-201ENST00000362402 107 ntBASIC0.13□□□□□ -2.39
RPA3P35244 RNU6-369P-201ENST00000362515 102 ntBASIC0.13□□□□□ -2.39
RPA3P35244 RNU6-1085P-201ENST00000363576 107 ntBASIC0.13□□□□□ -2.39
RPA3P35244 RNU6-595P-201ENST00000363944 107 ntBASIC0.13□□□□□ -2.39
RPA3P35244 Y_RNA.359-201ENST00000365498 102 ntBASIC0.13□□□□□ -2.39
RPA3P35244 MIR15B-201ENST00000385045 98 ntBASIC0.13□□□□□ -2.39
RPA3P35244 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.13□□□□□ -2.39
RPA3P35244 NDUFA4P2-201ENST00000489989 244 ntBASIC0.13□□□□□ -2.39
RPA3P35244 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.13□□□□□ -2.39
RPA3P35244 RNU6-256P-201ENST00000516747 97 ntBASIC0.13□□□□□ -2.39
RPA3P35244 Y_RNA.706-201ENST00000516933 99 ntBASIC0.13□□□□□ -2.39
RPA3P35244 LRRC34P1-201ENST00000542742 915 ntBASIC0.13□□□□□ -2.39
RPA3P35244 AC090617.3-201ENST00000573670 475 ntBASIC0.13□□□□□ -2.39
RPA3P35244 MIR3672-201ENST00000584290 82 ntBASIC0.13□□□□□ -2.39
RPA3P35244 AL355073.2-201ENST00000612106 557 ntBASIC0.13□□□□□ -2.39
RPA3P35244 AC015726.2-201ENST00000620112 122 ntBASIC0.13□□□□□ -2.39
RPA3P35244 MIR6863-201ENST00000636112 90 ntBASIC0.13□□□□□ -2.39
RPA3P35244 ZNF299P-201ENST00000406845 1804 ntBASIC0.13□□□□□ -2.39
RPA3P35244 Y_RNA.112-201ENST00000363250 102 ntBASIC0.12□□□□□ -2.39
RPA3P35244 Y_RNA.498-201ENST00000384460 102 ntBASIC0.12□□□□□ -2.39
RPA3P35244 RNU6-613P-201ENST00000410412 108 ntBASIC0.12□□□□□ -2.39
RPA3P35244 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.12□□□□□ -2.39
RPA3P35244 MLLT10P1-201ENST00000418346 262 ntBASIC0.12□□□□□ -2.39
RPA3P35244 EIF1P2-201ENST00000428233 350 ntBASIC0.12□□□□□ -2.39
RPA3P35244 DLGAP5P1-201ENST00000430307 464 ntBASIC0.12□□□□□ -2.39
RPA3P35244 MTND1P4-201ENST00000435196 415 ntBASIC0.12□□□□□ -2.39
RPA3P35244 RNU7-66P-201ENST00000459469 62 ntBASIC0.12□□□□□ -2.39
RPA3P35244 SNORD45.4-201ENST00000516629 73 ntBASIC0.12□□□□□ -2.39
RPA3P35244 AC018448.1-201ENST00000552843 316 ntBASIC0.12□□□□□ -2.39
RPA3P35244 AC145350.1-201ENST00000567426 208 ntBASIC0.12□□□□□ -2.39
RPA3P35244 MIR4514-201ENST00000581410 57 ntBASIC0.12□□□□□ -2.39
RPA3P35244 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.12□□□□□ -2.39
RPA3P35244 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.12□□□□□ -2.39
RPA3P35244 MIR410-201ENST00000362222 80 ntBASIC0.11□□□□□ -2.39
RPA3P35244 RNU6-1084P-201ENST00000362498 107 ntBASIC0.11□□□□□ -2.39
RPA3P35244 Y_RNA.135-201ENST00000363439 95 ntBASIC0.11□□□□□ -2.39
RPA3P35244 Y_RNA.212-201ENST00000364177 102 ntBASIC0.11□□□□□ -2.39
RPA3P35244 RNU6-1145P-201ENST00000384246 107 ntBASIC0.11□□□□□ -2.39
RPA3P35244 MIR193B-201ENST00000384907 83 ntBASIC0.11□□□□□ -2.39
RPA3P35244 MIR520H-201ENST00000385126 88 ntBASIC0.11□□□□□ -2.39
RPA3P35244 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.11□□□□□ -2.39
RPA3P35244 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.11□□□□□ -2.39
RPA3P35244 AC105313.1-201ENST00000509121 353 ntBASIC0.11□□□□□ -2.39
RPA3P35244 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.11□□□□□ -2.39
RPA3P35244 AC100812.1-201ENST00000607622 580 ntBASIC0.11□□□□□ -2.39
RPA3P35244 MIR522-201ENST00000385071 87 ntBASIC0.1□□□□□ -2.39
RPA3P35244 SNORD83.1-201ENST00000411362 77 ntBASIC0.1□□□□□ -2.39
RPA3P35244 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.1□□□□□ -2.39
RPA3P35244 MTND4LP16-201ENST00000440828 295 ntBASIC0.1□□□□□ -2.39
RPA3P35244 MIR3612-201ENST00000579753 87 ntBASIC0.1□□□□□ -2.39
RPA3P35244 AC092634.7-201ENST00000621022 103 ntBASIC0.1□□□□□ -2.39
RPA3P35244 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.1□□□□□ -2.39
RPA3P35244 MIR3674-201ENST00000636576 68 ntBASIC0.1□□□□□ -2.39
RPA3P35244 Y_RNA.36-201ENST00000362602 112 ntBASIC0.09□□□□□ -2.4
RPA3P35244 Y_RNA.48-201ENST00000362710 103 ntBASIC0.09□□□□□ -2.4
RPA3P35244 Y_RNA.168-201ENST00000363740 102 ntBASIC0.09□□□□□ -2.4
RPA3P35244 Y_RNA.490-201ENST00000384413 102 ntBASIC0.09□□□□□ -2.4
RPA3P35244 MIR520F-201ENST00000384824 87 ntBASIC0.09□□□□□ -2.4
RPA3P35244 RNA5SP299-201ENST00000391203 116 ntBASIC0.09□□□□□ -2.4
RPA3P35244 RNA5SP475-201ENST00000410568 110 ntBASIC0.09□□□□□ -2.4
RPA3P35244 MTND1P26-201ENST00000440488 538 ntBASIC0.09□□□□□ -2.4
RPA3P35244 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.09□□□□□ -2.4
RPA3P35244 SNRPGP12-201ENST00000449481 213 ntBASIC0.09□□□□□ -2.4
RPA3P35244 snoU13.21-201ENST00000459368 105 ntBASIC0.09□□□□□ -2.4
RPA3P35244 SNORA25.10-201ENST00000515926 124 ntBASIC0.09□□□□□ -2.4
RPA3P35244 RNU6-1337P-201ENST00000516525 95 ntBASIC0.09□□□□□ -2.4
RPA3P35244 Y_RNA.693-201ENST00000516641 110 ntBASIC0.09□□□□□ -2.4
RPA3P35244 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.09□□□□□ -2.4
RPA3P35244 SNORD44.1-201ENST00000363202 61 ntBASIC0.08□□□□□ -2.4
RPA3P35244 RNU6-1059P-201ENST00000363752 98 ntBASIC0.08□□□□□ -2.4
RPA3P35244 Y_RNA.243-201ENST00000364481 109 ntBASIC0.08□□□□□ -2.4
RPA3P35244 Y_RNA.253-201ENST00000364562 112 ntBASIC0.08□□□□□ -2.4
RPA3P35244 RNU4-67P-201ENST00000364569 141 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms