Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 SNORD113-7-201ENST00000363762 77 ntBASIC-0.29□□□□□ -2.46
CASP1P29466 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.29□□□□□ -2.46
CASP1P29466 Y_RNA.378-201ENST00000365652 113 ntBASIC-0.29□□□□□ -2.46
CASP1P29466 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.29□□□□□ -2.46
CASP1P29466 MIR522-201ENST00000385071 87 ntBASIC-0.29□□□□□ -2.46
CASP1P29466 MIR610-201ENST00000385139 96 ntBASIC-0.29□□□□□ -2.46
CASP1P29466 MIR873-201ENST00000401120 77 ntBASIC-0.29□□□□□ -2.46
CASP1P29466 MIR548H2-201ENST00000408874 88 ntBASIC-0.29□□□□□ -2.46
CASP1P29466 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.29□□□□□ -2.46
CASP1P29466 AL354751.2-201ENST00000415471 210 ntBASIC-0.29□□□□□ -2.46
CASP1P29466 AC073464.1-201ENST00000429823 534 ntBASIC-0.29□□□□□ -2.46
CASP1P29466 AL353572.1-201ENST00000442490 417 ntBASIC-0.29□□□□□ -2.46
CASP1P29466 AC069271.1-201ENST00000445577 156 ntBASIC-0.29□□□□□ -2.46
CASP1P29466 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.29□□□□□ -2.46
CASP1P29466 SNORA40.12-201ENST00000516329 111 ntBASIC-0.29□□□□□ -2.46
CASP1P29466 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.29□□□□□ -2.46
CASP1P29466 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.29□□□□□ -2.46
CASP1P29466 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.29□□□□□ -2.46
CASP1P29466 AC100830.2-201ENST00000581636 240 ntBASIC-0.29□□□□□ -2.46
CASP1P29466 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.3□□□□□ -2.46
CASP1P29466 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.3□□□□□ -2.46
CASP1P29466 BTF3P11-201ENST00000426582 477 ntBASIC-0.3□□□□□ -2.46
CASP1P29466 AL358934.1-201ENST00000432346 324 ntBASIC-0.3□□□□□ -2.46
CASP1P29466 RNU7-187P-201ENST00000458985 68 ntBASIC-0.3□□□□□ -2.46
CASP1P29466 MTCO2P30-201ENST00000503662 364 ntBASIC-0.3□□□□□ -2.46
CASP1P29466 RNU7-129P-201ENST00000516128 62 ntBASIC-0.3□□□□□ -2.46
CASP1P29466 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.3□□□□□ -2.46
CASP1P29466 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.3□□□□□ -2.46
CASP1P29466 AC133485.4-201ENST00000561835 220 ntBASIC-0.3□□□□□ -2.46
CASP1P29466 MIR3913-1-201ENST00000577744 102 ntBASIC-0.3□□□□□ -2.46
CASP1P29466 uc_338.6-201ENST00000613544 171 ntBASIC-0.3□□□□□ -2.46
CASP1P29466 FAM157A-202ENST00000615155 405 ntBASIC-0.3□□□□□ -2.46
CASP1P29466 AC067863.3-201ENST00000624172 122 ntBASIC-0.3□□□□□ -2.46
CASP1P29466 AC005609.4-201ENST00000625071 447 ntBASIC-0.3□□□□□ -2.46
CASP1P29466 U6.115-201ENST00000636045 103 ntBASIC-0.3□□□□□ -2.46
CASP1P29466 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.31□□□□□ -2.46
CASP1P29466 SNORD50B-201ENST00000364995 70 ntBASIC-0.31□□□□□ -2.46
CASP1P29466 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.31□□□□□ -2.46
CASP1P29466 RNU6-187P-201ENST00000384139 106 ntBASIC-0.31□□□□□ -2.46
CASP1P29466 RNU6-125P-201ENST00000384505 107 ntBASIC-0.31□□□□□ -2.46
CASP1P29466 MIR644A-201ENST00000385262 94 ntBASIC-0.31□□□□□ -2.46
CASP1P29466 MIR938-201ENST00000401216 83 ntBASIC-0.31□□□□□ -2.46
CASP1P29466 RNA5SP127-201ENST00000411051 133 ntBASIC-0.31□□□□□ -2.46
CASP1P29466 ELOCP21-201ENST00000412558 336 ntBASIC-0.31□□□□□ -2.46
CASP1P29466 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.31□□□□□ -2.46
CASP1P29466 MTCO1P20-201ENST00000425366 358 ntBASIC-0.31□□□□□ -2.46
CASP1P29466 RNU6-329P-201ENST00000459618 107 ntBASIC-0.31□□□□□ -2.46
CASP1P29466 SNORA25.10-201ENST00000515926 124 ntBASIC-0.31□□□□□ -2.46
CASP1P29466 AC090616.2-202ENST00000584248 222 ntBASIC-0.31□□□□□ -2.46
CASP1P29466 Z94722.1-201ENST00000604328 474 ntBASIC-0.31□□□□□ -2.46
CASP1P29466 AC005828.6-201ENST00000606610 232 ntBASIC-0.31□□□□□ -2.46
CASP1P29466 AL354950.2-201ENST00000617939 290 ntBASIC-0.31□□□□□ -2.46
CASP1P29466 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.32□□□□□ -2.46
CASP1P29466 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.32□□□□□ -2.46
CASP1P29466 MLLT10P1-201ENST00000418346 262 ntBASIC-0.32□□□□□ -2.46
CASP1P29466 MTCO2P27-201ENST00000420740 428 ntBASIC-0.32□□□□□ -2.46
CASP1P29466 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.32□□□□□ -2.46
CASP1P29466 SNRPGP10-201ENST00000432323 225 ntBASIC-0.32□□□□□ -2.46
CASP1P29466 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-0.32□□□□□ -2.46
CASP1P29466 RNU4-49P-201ENST00000516080 140 ntBASIC-0.32□□□□□ -2.46
CASP1P29466 AC134698.4-201ENST00000523451 826 ntBASIC-0.32□□□□□ -2.46
CASP1P29466 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.33□□□□□ -2.46
CASP1P29466 Y_RNA.167-201ENST00000363735 109 ntBASIC-0.33□□□□□ -2.46
CASP1P29466 RNU4-28P-201ENST00000364739 141 ntBASIC-0.33□□□□□ -2.46
CASP1P29466 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.33□□□□□ -2.46
CASP1P29466 SNORA2A-201ENST00000383885 135 ntBASIC-0.33□□□□□ -2.46
CASP1P29466 RNU6-281P-201ENST00000384212 103 ntBASIC-0.33□□□□□ -2.46
CASP1P29466 RNU6-790P-201ENST00000384479 105 ntBASIC-0.33□□□□□ -2.46
CASP1P29466 RNU6-1158P-201ENST00000391167 107 ntBASIC-0.33□□□□□ -2.46
CASP1P29466 MTCO2P33-201ENST00000402100 465 ntBASIC-0.33□□□□□ -2.46
CASP1P29466 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-0.33□□□□□ -2.46
CASP1P29466 HMGN2P32-201ENST00000444648 269 ntBASIC-0.33□□□□□ -2.46
CASP1P29466 AC005042.3-201ENST00000453230 174 ntBASIC-0.33□□□□□ -2.46
CASP1P29466 RNU7-102P-201ENST00000458948 62 ntBASIC-0.33□□□□□ -2.46
CASP1P29466 RPL17P19-201ENST00000489069 552 ntBASIC-0.33□□□□□ -2.46
CASP1P29466 RNA5SP480-201ENST00000516840 109 ntBASIC-0.33□□□□□ -2.46
CASP1P29466 MTND1P7-201ENST00000632801 297 ntBASIC-0.33□□□□□ -2.46
CASP1P29466 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.33□□□□□ -2.46
CASP1P29466 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.34□□□□□ -2.46
CASP1P29466 Y_RNA.201-201ENST00000364052 96 ntBASIC-0.34□□□□□ -2.46
CASP1P29466 RNU6-454P-201ENST00000364292 107 ntBASIC-0.34□□□□□ -2.46
CASP1P29466 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.34□□□□□ -2.46
CASP1P29466 RNA5SP128-201ENST00000365305 116 ntBASIC-0.34□□□□□ -2.46
CASP1P29466 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.34□□□□□ -2.46
CASP1P29466 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.34□□□□□ -2.46
CASP1P29466 HMGN1P10-201ENST00000474557 553 ntBASIC-0.34□□□□□ -2.46
CASP1P29466 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.34□□□□□ -2.46
CASP1P29466 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-0.34□□□□□ -2.46
CASP1P29466 AC010486.3-201ENST00000511602 785 ntBASIC-0.34□□□□□ -2.46
CASP1P29466 AC010525.2-201ENST00000590920 195 ntBASIC-0.34□□□□□ -2.46
CASP1P29466 AP000753.3-201ENST00000604083 169 ntBASIC-0.34□□□□□ -2.46
CASP1P29466 AC072046.2-201ENST00000618366 268 ntBASIC-0.34□□□□□ -2.46
CASP1P29466 AC073534.2-201ENST00000620377 381 ntBASIC-0.34□□□□□ -2.46
CASP1P29466 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.34□□□□□ -2.46
CASP1P29466 FGF7P2-201ENST00000332473 296 ntBASIC-0.35□□□□□ -2.47
CASP1P29466 RNU4-21P-201ENST00000362802 126 ntBASIC-0.35□□□□□ -2.47
CASP1P29466 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.35□□□□□ -2.47
CASP1P29466 RNA5SP457-201ENST00000363657 124 ntBASIC-0.35□□□□□ -2.47
CASP1P29466 RNA5SP117-201ENST00000365294 118 ntBASIC-0.35□□□□□ -2.47
CASP1P29466 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms