Protein–RNA interactions for Protein: P16499

PDE6A, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6AP16499 RNU7-115P-201ENST00000516433 55 ntBASIC2.8□□□□□ -1.96
PDE6AP16499 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.8□□□□□ -1.96
PDE6AP16499 AP003357.1-201ENST00000604497 148 ntBASIC2.8□□□□□ -1.96
PDE6AP16499 AC005972.2-201ENST00000604690 348 ntBASIC2.8□□□□□ -1.96
PDE6AP16499 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.8□□□□□ -1.96
PDE6AP16499 MIR548AY-201ENST00000617669 107 ntBASIC2.8□□□□□ -1.96
PDE6AP16499 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.8□□□□□ -1.96
PDE6AP16499 Z82195.2-201ENST00000612348 18351 ntBASIC2.79□□□□□ -1.96
PDE6AP16499 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PDE6AP16499 SNORD56.5-201ENST00000364281 72 ntBASIC2.79□□□□□ -1.96
PDE6AP16499 DEFA7P-201ENST00000382676 285 ntBASIC2.79□□□□□ -1.96
PDE6AP16499 RNU6-1323P-201ENST00000384025 107 ntBASIC2.79□□□□□ -1.96
PDE6AP16499 RNU6-959P-201ENST00000384671 107 ntBASIC2.79□□□□□ -1.96
PDE6AP16499 RPS15AP28-201ENST00000435088 386 ntBASIC2.79□□□□□ -1.96
PDE6AP16499 AC009238.1-201ENST00000442165 424 ntBASIC2.79□□□□□ -1.96
PDE6AP16499 AC009237.6-201ENST00000446969 424 ntBASIC2.79□□□□□ -1.96
PDE6AP16499 AC010409.1-201ENST00000487382 476 ntBASIC2.79□□□□□ -1.96
PDE6AP16499 AC117454.1-201ENST00000491120 168 ntBASIC2.79□□□□□ -1.96
PDE6AP16499 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.79□□□□□ -1.96
PDE6AP16499 SNORD116-25-201ENST00000516517 92 ntBASIC2.79□□□□□ -1.96
PDE6AP16499 NDUFA5P6-201ENST00000542110 379 ntBASIC2.79□□□□□ -1.96
PDE6AP16499 AC004486.1-201ENST00000546846 233 ntBASIC2.79□□□□□ -1.96
PDE6AP16499 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.79□□□□□ -1.96
PDE6AP16499 AL391903.3-201ENST00000612158 163 ntBASIC2.79□□□□□ -1.96
PDE6AP16499 VTRNA1-1-201ENST00000363120 99 ntBASIC2.78□□□□□ -1.96
PDE6AP16499 RNU4-10P-201ENST00000364383 140 ntBASIC2.78□□□□□ -1.96
PDE6AP16499 Y_RNA.586-201ENST00000391146 98 ntBASIC2.78□□□□□ -1.96
PDE6AP16499 MIR1253-201ENST00000408273 105 ntBASIC2.78□□□□□ -1.96
PDE6AP16499 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.78□□□□□ -1.96
PDE6AP16499 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.78□□□□□ -1.96
PDE6AP16499 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.78□□□□□ -1.96
PDE6AP16499 RNU7-116P-201ENST00000516940 62 ntBASIC2.78□□□□□ -1.96
PDE6AP16499 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.78□□□□□ -1.96
PDE6AP16499 U2.20-201ENST00000613956 192 ntBASIC2.78□□□□□ -1.96
PDE6AP16499 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
PDE6AP16499 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
PDE6AP16499 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.78□□□□□ -1.96
PDE6AP16499 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PDE6AP16499 Y_RNA.24-201ENST00000362508 103 ntBASIC2.77□□□□□ -1.97
PDE6AP16499 RNU6-818P-201ENST00000364837 108 ntBASIC2.77□□□□□ -1.97
PDE6AP16499 RNU1-51P-201ENST00000365345 176 ntBASIC2.77□□□□□ -1.97
PDE6AP16499 RNU6-117P-201ENST00000365415 107 ntBASIC2.77□□□□□ -1.97
PDE6AP16499 RNU6-376P-201ENST00000384731 106 ntBASIC2.77□□□□□ -1.97
PDE6AP16499 Y_RNA.572-201ENST00000384757 98 ntBASIC2.77□□□□□ -1.97
PDE6AP16499 MIR569-201ENST00000385228 96 ntBASIC2.77□□□□□ -1.97
PDE6AP16499 SNORA36B-201ENST00000410438 131 ntBASIC2.77□□□□□ -1.97
PDE6AP16499 AL135786.1-201ENST00000415892 214 ntBASIC2.77□□□□□ -1.97
PDE6AP16499 Z98742.3-201ENST00000418637 326 ntBASIC2.77□□□□□ -1.97
PDE6AP16499 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.77□□□□□ -1.97
PDE6AP16499 AC109810.1-201ENST00000534066 224 ntBASIC2.77□□□□□ -1.97
PDE6AP16499 MIR4724-201ENST00000579485 89 ntBASIC2.77□□□□□ -1.97
PDE6AP16499 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.77□□□□□ -1.97
PDE6AP16499 MIR3670-2-201ENST00000582974 65 ntBASIC2.77□□□□□ -1.97
PDE6AP16499 MIR3670-1-201ENST00000584160 65 ntBASIC2.77□□□□□ -1.97
PDE6AP16499 MIR3670-3-201ENST00000584855 65 ntBASIC2.77□□□□□ -1.97
PDE6AP16499 MIR4438-201ENST00000585271 93 ntBASIC2.77□□□□□ -1.97
PDE6AP16499 POLR3GP1-201ENST00000594073 261 ntBASIC2.77□□□□□ -1.97
PDE6AP16499 MIR3670-4-201ENST00000612260 65 ntBASIC2.77□□□□□ -1.97
PDE6AP16499 AC012640.5-201ENST00000623897 319 ntBASIC2.77□□□□□ -1.97
PDE6AP16499 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PDE6AP16499 ZNF658B-202ENST00000615961 3375 ntBASIC2.77□□□□□ -1.97
PDE6AP16499 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
PDE6AP16499 Y_RNA.99-201ENST00000363138 105 ntBASIC2.76□□□□□ -1.97
PDE6AP16499 RNU1-22P-201ENST00000363334 158 ntBASIC2.76□□□□□ -1.97
PDE6AP16499 SNORA25.6-201ENST00000364121 118 ntBASIC2.76□□□□□ -1.97
PDE6AP16499 RNU6-969P-201ENST00000383900 105 ntBASIC2.76□□□□□ -1.97
PDE6AP16499 RNU6-22P-201ENST00000384355 107 ntBASIC2.76□□□□□ -1.97
PDE6AP16499 AC060773.1-201ENST00000421698 310 ntBASIC2.76□□□□□ -1.97
PDE6AP16499 RNU6-1146P-201ENST00000516282 102 ntBASIC2.76□□□□□ -1.97
PDE6AP16499 RNU6-479P-201ENST00000516348 105 ntBASIC2.76□□□□□ -1.97
PDE6AP16499 RNU6-63P-201ENST00000516690 95 ntBASIC2.76□□□□□ -1.97
PDE6AP16499 RNU6-453P-201ENST00000516819 85 ntBASIC2.76□□□□□ -1.97
PDE6AP16499 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.76□□□□□ -1.97
PDE6AP16499 AC127455.1-201ENST00000565496 145 ntBASIC2.76□□□□□ -1.97
PDE6AP16499 MIR3945-201ENST00000581853 98 ntBASIC2.76□□□□□ -1.97
PDE6AP16499 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
PDE6AP16499 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
PDE6AP16499 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PDE6AP16499 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.76□□□□□ -1.97
PDE6AP16499 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.75□□□□□ -1.97
PDE6AP16499 MIR367-201ENST00000362299 68 ntBASIC2.75□□□□□ -1.97
PDE6AP16499 RNU6-151P-201ENST00000364158 107 ntBASIC2.75□□□□□ -1.97
PDE6AP16499 RNA5SP511-201ENST00000410487 115 ntBASIC2.75□□□□□ -1.97
PDE6AP16499 HMGN2P35-201ENST00000412164 270 ntBASIC2.75□□□□□ -1.97
PDE6AP16499 TRBV12-1-201ENST00000479785 344 ntBASIC2.75□□□□□ -1.97
PDE6AP16499 AC107027.2-201ENST00000512197 115 ntBASIC2.75□□□□□ -1.97
PDE6AP16499 AC097462.1-201ENST00000514125 324 ntBASIC2.75□□□□□ -1.97
PDE6AP16499 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.75□□□□□ -1.97
PDE6AP16499 RNU1-41P-201ENST00000516161 162 ntBASIC2.75□□□□□ -1.97
PDE6AP16499 RNU1-48P-201ENST00000516400 162 ntBASIC2.75□□□□□ -1.97
PDE6AP16499 MIR548X2-201ENST00000579776 100 ntBASIC2.75□□□□□ -1.97
PDE6AP16499 MIR6766-201ENST00000622641 72 ntBASIC2.75□□□□□ -1.97
PDE6AP16499 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PDE6AP16499 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
PDE6AP16499 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PDE6AP16499 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
PDE6AP16499 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
PDE6AP16499 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
PDE6AP16499 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
PDE6AP16499 RNU4-13P-201ENST00000364019 141 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms