Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 SNORD114-27-201ENST00000363766 70 ntBASIC0.72□□□□□ -2.29
NCK1P16333 RNY1-201ENST00000364228 113 ntBASIC0.72□□□□□ -2.29
NCK1P16333 RNU4-12P-201ENST00000365233 139 ntBASIC0.72□□□□□ -2.29
NCK1P16333 MIR526A1-201ENST00000384897 85 ntBASIC0.72□□□□□ -2.29
NCK1P16333 RNU6-1050P-201ENST00000410388 107 ntBASIC0.72□□□□□ -2.29
NCK1P16333 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.72□□□□□ -2.29
NCK1P16333 AC104332.1-201ENST00000440471 797 ntBASIC0.72□□□□□ -2.29
NCK1P16333 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.72□□□□□ -2.29
NCK1P16333 U8.19-201ENST00000459095 133 ntBASIC0.72□□□□□ -2.29
NCK1P16333 U8.22-201ENST00000459141 133 ntBASIC0.72□□□□□ -2.29
NCK1P16333 AC116353.2-201ENST00000505332 712 ntBASIC0.72□□□□□ -2.29
NCK1P16333 AC105313.1-201ENST00000509121 353 ntBASIC0.72□□□□□ -2.29
NCK1P16333 SNORA40.9-201ENST00000515895 93 ntBASIC0.72□□□□□ -2.29
NCK1P16333 RNU6-307P-201ENST00000516743 106 ntBASIC0.72□□□□□ -2.29
NCK1P16333 Y_RNA.708-201ENST00000516950 96 ntBASIC0.72□□□□□ -2.29
NCK1P16333 AP003716.2-201ENST00000528260 108 ntBASIC0.72□□□□□ -2.29
NCK1P16333 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.72□□□□□ -2.29
NCK1P16333 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.72□□□□□ -2.29
NCK1P16333 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
NCK1P16333 RNA5SP361-201ENST00000362686 118 ntBASIC0.71□□□□□ -2.3
NCK1P16333 Y_RNA.453-201ENST00000384223 109 ntBASIC0.71□□□□□ -2.3
NCK1P16333 RNU6-318P-201ENST00000384283 103 ntBASIC0.71□□□□□ -2.3
NCK1P16333 Y_RNA.482-201ENST00000384377 111 ntBASIC0.71□□□□□ -2.3
NCK1P16333 MIR520E-201ENST00000384867 87 ntBASIC0.71□□□□□ -2.3
NCK1P16333 SNORA75.2-201ENST00000391138 150 ntBASIC0.71□□□□□ -2.3
NCK1P16333 SNORA75.3-201ENST00000391231 150 ntBASIC0.71□□□□□ -2.3
NCK1P16333 MIR942-201ENST00000401111 86 ntBASIC0.71□□□□□ -2.3
NCK1P16333 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.71□□□□□ -2.3
NCK1P16333 Y_RNA.594-201ENST00000410373 140 ntBASIC0.71□□□□□ -2.3
NCK1P16333 RPS3AP1-201ENST00000413190 320 ntBASIC0.71□□□□□ -2.3
NCK1P16333 AL162725.1-201ENST00000435405 301 ntBASIC0.71□□□□□ -2.3
NCK1P16333 MTATP6P26-201ENST00000445926 662 ntBASIC0.71□□□□□ -2.3
NCK1P16333 RPS29P1-201ENST00000465274 159 ntBASIC0.71□□□□□ -2.3
NCK1P16333 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.71□□□□□ -2.3
NCK1P16333 Y_RNA.682-201ENST00000516457 100 ntBASIC0.71□□□□□ -2.3
NCK1P16333 AC022616.4-201ENST00000522985 181 ntBASIC0.71□□□□□ -2.3
NCK1P16333 MIR6515-201ENST00000619843 57 ntBASIC0.71□□□□□ -2.3
NCK1P16333 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
NCK1P16333 MIR96-201ENST00000362288 78 ntBASIC0.7□□□□□ -2.3
NCK1P16333 RNU6-874P-201ENST00000362390 105 ntBASIC0.7□□□□□ -2.3
NCK1P16333 Y_RNA.358-201ENST00000365491 99 ntBASIC0.7□□□□□ -2.3
NCK1P16333 RNU6-110P-201ENST00000384508 104 ntBASIC0.7□□□□□ -2.3
NCK1P16333 MIR15B-201ENST00000385045 98 ntBASIC0.7□□□□□ -2.3
NCK1P16333 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.7□□□□□ -2.3
NCK1P16333 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.7□□□□□ -2.3
NCK1P16333 PSMC1P5-201ENST00000512850 177 ntBASIC0.7□□□□□ -2.3
NCK1P16333 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.7□□□□□ -2.3
NCK1P16333 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.7□□□□□ -2.3
NCK1P16333 AC090517.2-201ENST00000614966 680 ntBASIC0.7□□□□□ -2.3
NCK1P16333 MIR6866-201ENST00000638146 69 ntBASIC0.7□□□□□ -2.3
NCK1P16333 Y_RNA.2-201ENST00000362330 96 ntBASIC0.69□□□□□ -2.3
NCK1P16333 RNA5SP264-201ENST00000363115 107 ntBASIC0.69□□□□□ -2.3
NCK1P16333 Y_RNA.112-201ENST00000363250 102 ntBASIC0.69□□□□□ -2.3
NCK1P16333 AC117470.1-201ENST00000381974 330 ntBASIC0.69□□□□□ -2.3
NCK1P16333 Y_RNA.436-201ENST00000384097 102 ntBASIC0.69□□□□□ -2.3
NCK1P16333 MIR100-201ENST00000385259 80 ntBASIC0.69□□□□□ -2.3
NCK1P16333 MTND5P15-201ENST00000434246 349 ntBASIC0.69□□□□□ -2.3
NCK1P16333 RPEP5-201ENST00000441137 268 ntBASIC0.69□□□□□ -2.3
NCK1P16333 AC233266.1-201ENST00000454518 96 ntBASIC0.69□□□□□ -2.3
NCK1P16333 ELOCP24-201ENST00000456370 334 ntBASIC0.69□□□□□ -2.3
NCK1P16333 snoU13.25-201ENST00000458945 104 ntBASIC0.69□□□□□ -2.3
NCK1P16333 RNU7-87P-201ENST00000459343 62 ntBASIC0.69□□□□□ -2.3
NCK1P16333 Y_RNA.670-201ENST00000516255 105 ntBASIC0.69□□□□□ -2.3
NCK1P16333 RNU2-12P-201ENST00000517216 168 ntBASIC0.69□□□□□ -2.3
NCK1P16333 AC012557.2-201ENST00000605919 418 ntBASIC0.69□□□□□ -2.3
NCK1P16333 AC242852.1-201ENST00000612151 96 ntBASIC0.69□□□□□ -2.3
NCK1P16333 AC244015.1-201ENST00000622301 99 ntBASIC0.69□□□□□ -2.3
NCK1P16333 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.69□□□□□ -2.3
NCK1P16333 Y_RNA.339-201ENST00000365325 102 ntBASIC0.68□□□□□ -2.3
NCK1P16333 MIR548J-201ENST00000408833 112 ntBASIC0.68□□□□□ -2.3
NCK1P16333 MTND3P8-201ENST00000412909 339 ntBASIC0.68□□□□□ -2.3
NCK1P16333 AL354751.2-201ENST00000415471 210 ntBASIC0.68□□□□□ -2.3
NCK1P16333 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.68□□□□□ -2.3
NCK1P16333 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.68□□□□□ -2.3
NCK1P16333 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.68□□□□□ -2.3
NCK1P16333 RPL17P19-201ENST00000489069 552 ntBASIC0.68□□□□□ -2.3
NCK1P16333 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.68□□□□□ -2.3
NCK1P16333 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.68□□□□□ -2.3
NCK1P16333 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.68□□□□□ -2.3
NCK1P16333 AC022709.1-201ENST00000615967 87 ntBASIC0.68□□□□□ -2.3
NCK1P16333 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.68□□□□□ -2.3
NCK1P16333 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.68□□□□□ -2.3
NCK1P16333 Y_RNA.3-201ENST00000362331 103 ntBASIC0.67□□□□□ -2.3
NCK1P16333 RNU6-1301P-201ENST00000362724 104 ntBASIC0.67□□□□□ -2.3
NCK1P16333 SNORD115-30-201ENST00000364117 82 ntBASIC0.67□□□□□ -2.3
NCK1P16333 MIR598-201ENST00000384868 97 ntBASIC0.67□□□□□ -2.3
NCK1P16333 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.67□□□□□ -2.3
NCK1P16333 AL606490.4-201ENST00000423117 127 ntBASIC0.67□□□□□ -2.3
NCK1P16333 AC107399.1-201ENST00000451226 265 ntBASIC0.67□□□□□ -2.3
NCK1P16333 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.67□□□□□ -2.3
NCK1P16333 U7.7-201ENST00000459276 60 ntBASIC0.67□□□□□ -2.3
NCK1P16333 AC117454.1-201ENST00000491120 168 ntBASIC0.67□□□□□ -2.3
NCK1P16333 AC113410.1-201ENST00000505029 247 ntBASIC0.67□□□□□ -2.3
NCK1P16333 RNU11-2P-201ENST00000516898 142 ntBASIC0.67□□□□□ -2.3
NCK1P16333 SNORA74.3-201ENST00000517108 154 ntBASIC0.67□□□□□ -2.3
NCK1P16333 AC023442.1-201ENST00000531247 422 ntBASIC0.67□□□□□ -2.3
NCK1P16333 AC025627.3-201ENST00000582078 182 ntBASIC0.67□□□□□ -2.3
NCK1P16333 MIR3192-201ENST00000584920 77 ntBASIC0.67□□□□□ -2.3
NCK1P16333 AL353765.1-201ENST00000605514 183 ntBASIC0.67□□□□□ -2.3
NCK1P16333 SEPT14P17-201ENST00000617978 177 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms