Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 SNORD114-19-201ENST00000363072 75 ntBASIC-2.12□□□□□ -2.75
VCANP13611 RNU6-549P-201ENST00000384433 107 ntBASIC-2.12□□□□□ -2.75
VCANP13611 RNU6-101P-201ENST00000410323 104 ntBASIC-2.12□□□□□ -2.75
VCANP13611 AC098592.2-201ENST00000413158 265 ntBASIC-2.12□□□□□ -2.75
VCANP13611 MTATP6P27-201ENST00000416987 621 ntBASIC-2.12□□□□□ -2.75
VCANP13611 BEND7P1-201ENST00000422058 457 ntBASIC-2.12□□□□□ -2.75
VCANP13611 POLR3GP1-201ENST00000594073 261 ntBASIC-2.12□□□□□ -2.75
VCANP13611 AC020891.4-201ENST00000605745 93 ntBASIC-2.12□□□□□ -2.75
VCANP13611 Y_RNA.162-201ENST00000363683 102 ntBASIC-2.12□□□□□ -2.75
VCANP13611 RNU2-15P-201ENST00000410692 191 ntBASIC-2.12□□□□□ -2.75
VCANP13611 UBE2D3P3-201ENST00000426992 425 ntBASIC-2.12□□□□□ -2.75
VCANP13611 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-2.12□□□□□ -2.75
VCANP13611 snoU2_19.1-201ENST00000362361 80 ntBASIC-2.13□□□□□ -2.75
VCANP13611 RNA5SP48-201ENST00000363969 126 ntBASIC-2.13□□□□□ -2.75
VCANP13611 Y_RNA.569-201ENST00000384749 103 ntBASIC-2.13□□□□□ -2.75
VCANP13611 AL354692.1-201ENST00000423044 315 ntBASIC-2.13□□□□□ -2.75
VCANP13611 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-2.13□□□□□ -2.75
VCANP13611 AC009646.1-201ENST00000510455 318 ntBASIC-2.13□□□□□ -2.75
VCANP13611 AC090517.1-201ENST00000569307 266 ntBASIC-2.13□□□□□ -2.75
VCANP13611 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-2.13□□□□□ -2.75
VCANP13611 U8.17-201ENST00000391292 132 ntBASIC-2.13□□□□□ -2.75
VCANP13611 ZNF92P1Y-201ENST00000415010 1191 ntBASIC-2.13□□□□□ -2.75
VCANP13611 MTND1P4-201ENST00000435196 415 ntBASIC-2.13□□□□□ -2.75
VCANP13611 RNU6-175P-201ENST00000516896 107 ntBASIC-2.13□□□□□ -2.75
VCANP13611 AC018926.3-201ENST00000618841 406 ntBASIC-2.13□□□□□ -2.75
VCANP13611 Y_RNA.3-201ENST00000362331 103 ntBASIC-2.14□□□□□ -2.75
VCANP13611 AC093519.1-201ENST00000566109 298 ntBASIC-2.14□□□□□ -2.75
VCANP13611 RNU6-216P-201ENST00000363282 104 ntBASIC-2.14□□□□□ -2.75
VCANP13611 RNU6-141P-201ENST00000410499 105 ntBASIC-2.14□□□□□ -2.75
VCANP13611 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-2.14□□□□□ -2.75
VCANP13611 POLR2KP1-201ENST00000553226 168 ntBASIC-2.14□□□□□ -2.75
VCANP13611 SNORD68-201ENST00000363214 84 ntBASIC-2.15□□□□□ -2.75
VCANP13611 AL049777.1-201ENST00000622740 518 ntBASIC-2.15□□□□□ -2.75
VCANP13611 AL035461.1-201ENST00000421490 332 ntBASIC-2.15□□□□□ -2.75
VCANP13611 MTND1P27-201ENST00000451117 902 ntBASIC-2.15□□□□□ -2.75
VCANP13611 FGF7P6-202ENST00000451282 293 ntBASIC-2.15□□□□□ -2.75
VCANP13611 AL138752.1-201ENST00000452964 351 ntBASIC-2.15□□□□□ -2.75
VCANP13611 AL353752.1-201ENST00000454946 260 ntBASIC-2.15□□□□□ -2.75
VCANP13611 MTATP6P14-201ENST00000455189 673 ntBASIC-2.15□□□□□ -2.75
VCANP13611 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-2.15□□□□□ -2.75
VCANP13611 AP001372.4-201ENST00000524889 472 ntBASIC-2.15□□□□□ -2.75
VCANP13611 MIR4423-201ENST00000580922 80 ntBASIC-2.15□□□□□ -2.75
VCANP13611 AC022022.2-201ENST00000602989 360 ntBASIC-2.15□□□□□ -2.75
VCANP13611 Y_RNA.319-201ENST00000365138 92 ntBASIC-2.15□□□□□ -2.75
VCANP13611 RNU6-580P-201ENST00000365159 107 ntBASIC-2.15□□□□□ -2.75
VCANP13611 RNU6-1044P-201ENST00000384755 107 ntBASIC-2.16□□□□□ -2.75
VCANP13611 MIR520C-201ENST00000385005 87 ntBASIC-2.16□□□□□ -2.76
VCANP13611 Y_RNA.597-201ENST00000410463 100 ntBASIC-2.16□□□□□ -2.76
VCANP13611 U6.114-201ENST00000636407 96 ntBASIC-2.16□□□□□ -2.76
VCANP13611 RNU6-79P-201ENST00000362511 107 ntBASIC-2.16□□□□□ -2.76
VCANP13611 MIR186-201ENST00000384988 86 ntBASIC-2.16□□□□□ -2.76
VCANP13611 RNU2-43P-201ENST00000410306 190 ntBASIC-2.16□□□□□ -2.76
VCANP13611 LARP1BP3-201ENST00000437229 869 ntBASIC-2.16□□□□□ -2.76
VCANP13611 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-2.16□□□□□ -2.76
VCANP13611 U8.19-201ENST00000459095 133 ntBASIC-2.16□□□□□ -2.76
VCANP13611 RNU6-1041P-201ENST00000516254 102 ntBASIC-2.16□□□□□ -2.76
VCANP13611 SNORA1B-201ENST00000362535 133 ntBASIC-2.17□□□□□ -2.76
VCANP13611 RNU6-778P-201ENST00000363269 103 ntBASIC-2.17□□□□□ -2.76
VCANP13611 RNU7-59P-201ENST00000459101 61 ntBASIC-2.17□□□□□ -2.76
VCANP13611 RNU7-12P-201ENST00000516030 62 ntBASIC-2.17□□□□□ -2.76
VCANP13611 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC-2.17□□□□□ -2.76
VCANP13611 RNU7-41P-201ENST00000515917 61 ntBASIC-2.17□□□□□ -2.76
VCANP13611 AC124016.2-201ENST00000610058 665 ntBASIC-2.17□□□□□ -2.76
VCANP13611 AL136221.1-201ENST00000621449 509 ntBASIC-2.17□□□□□ -2.76
VCANP13611 AC008134.1-201ENST00000420943 193 ntBASIC-2.18□□□□□ -2.76
VCANP13611 RPL30P10-201ENST00000488148 337 ntBASIC-2.18□□□□□ -2.76
VCANP13611 MIR4251-201ENST00000635819 61 ntBASIC-2.18□□□□□ -2.76
VCANP13611 RNU6-1246P-201ENST00000391064 107 ntBASIC-2.18□□□□□ -2.76
VCANP13611 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-2.18□□□□□ -2.76
VCANP13611 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-2.18□□□□□ -2.76
VCANP13611 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-2.18□□□□□ -2.76
VCANP13611 AL359880.1-201ENST00000621879 266 ntBASIC-2.18□□□□□ -2.76
VCANP13611 RNU4-15P-201ENST00000362613 141 ntBASIC-2.18□□□□□ -2.76
VCANP13611 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC-2.18□□□□□ -2.76
VCANP13611 RNU6-1264P-201ENST00000383891 107 ntBASIC-2.18□□□□□ -2.76
VCANP13611 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-2.18□□□□□ -2.76
VCANP13611 AC111193.1-201ENST00000504097 155 ntBASIC-2.18□□□□□ -2.76
VCANP13611 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-2.18□□□□□ -2.76
VCANP13611 MIR4504-201ENST00000577413 92 ntBASIC-2.18□□□□□ -2.76
VCANP13611 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-2.18□□□□□ -2.76
VCANP13611 AL117336.2-201ENST00000602435 335 ntBASIC-2.18□□□□□ -2.76
VCANP13611 Y_RNA.376-201ENST00000365638 108 ntBASIC-2.19□□□□□ -2.76
VCANP13611 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-2.19□□□□□ -2.76
VCANP13611 Y_RNA.51-201ENST00000362725 102 ntBASIC-2.19□□□□□ -2.76
VCANP13611 RNU4-92P-201ENST00000363783 136 ntBASIC-2.19□□□□□ -2.76
VCANP13611 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.19□□□□□ -2.76
VCANP13611 AL109755.1-201ENST00000401791 649 ntBASIC-2.19□□□□□ -2.76
VCANP13611 MIR1185-2-201ENST00000408687 86 ntBASIC-2.19□□□□□ -2.76
VCANP13611 RNU7-185P-201ENST00000459215 60 ntBASIC-2.19□□□□□ -2.76
VCANP13611 snoR1.1-201ENST00000628177 80 ntBASIC-2.19□□□□□ -2.76
VCANP13611 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-2.19□□□□□ -2.76
VCANP13611 RNU6-532P-201ENST00000384318 107 ntBASIC-2.19□□□□□ -2.76
VCANP13611 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC-2.19□□□□□ -2.76
VCANP13611 RNU6-1291P-201ENST00000516591 104 ntBASIC-2.2□□□□□ -2.76
VCANP13611 Y_RNA.461-201ENST00000384263 103 ntBASIC-2.2□□□□□ -2.76
VCANP13611 SNORA18-201ENST00000384416 132 ntBASIC-2.2□□□□□ -2.76
VCANP13611 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-2.2□□□□□ -2.76
VCANP13611 RNU6-1190P-201ENST00000410811 104 ntBASIC-2.2□□□□□ -2.76
VCANP13611 MTCO3P38-201ENST00000468910 766 ntBASIC-2.2□□□□□ -2.76
VCANP13611 RNA5SP290-201ENST00000517133 127 ntBASIC-2.2□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms