Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 AC112487.2-201ENST00000637950 304 ntBASIC1.25□□□□□ -2.21
VIMP08670 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.25□□□□□ -2.21
VIMP08670 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
VIMP08670 Y_RNA.58-201ENST00000362807 102 ntBASIC1.24□□□□□ -2.21
VIMP08670 Y_RNA.146-201ENST00000363549 102 ntBASIC1.24□□□□□ -2.21
VIMP08670 Y_RNA.154-201ENST00000363624 102 ntBASIC1.24□□□□□ -2.21
VIMP08670 RNY3P1-201ENST00000365085 102 ntBASIC1.24□□□□□ -2.21
VIMP08670 RNY3-201ENST00000365484 102 ntBASIC1.24□□□□□ -2.21
VIMP08670 Y_RNA.496-201ENST00000384444 101 ntBASIC1.24□□□□□ -2.21
VIMP08670 MIR1285-1-201ENST00000408593 84 ntBASIC1.24□□□□□ -2.21
VIMP08670 MRPL35P3-201ENST00000421557 364 ntBASIC1.24□□□□□ -2.21
VIMP08670 RPS29P29-201ENST00000456396 171 ntBASIC1.24□□□□□ -2.21
VIMP08670 AL133373.1-201ENST00000497098 94 ntBASIC1.24□□□□□ -2.21
VIMP08670 RNU6-436P-201ENST00000516171 114 ntBASIC1.24□□□□□ -2.21
VIMP08670 Y_RNA.702-201ENST00000516843 96 ntBASIC1.24□□□□□ -2.21
VIMP08670 RNU6-1116P-201ENST00000517269 99 ntBASIC1.24□□□□□ -2.21
VIMP08670 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
VIMP08670 AC090049.2-201ENST00000550377 109 ntBASIC1.24□□□□□ -2.21
VIMP08670 MIR3945-201ENST00000581853 98 ntBASIC1.24□□□□□ -2.21
VIMP08670 AL117336.2-201ENST00000602435 335 ntBASIC1.24□□□□□ -2.21
VIMP08670 AL512598.1-201ENST00000610158 273 ntBASIC1.24□□□□□ -2.21
VIMP08670 GHRLOS.1-201ENST00000610995 70 ntBASIC1.24□□□□□ -2.21
VIMP08670 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
VIMP08670 Y_RNA.172-201ENST00000363765 102 ntBASIC1.23□□□□□ -2.21
VIMP08670 RNU6-1080P-201ENST00000383982 107 ntBASIC1.23□□□□□ -2.21
VIMP08670 RNY3P14-201ENST00000384309 102 ntBASIC1.23□□□□□ -2.21
VIMP08670 SNORD41-201ENST00000386967 70 ntBASIC1.23□□□□□ -2.21
VIMP08670 Y_RNA.621-201ENST00000411065 96 ntBASIC1.23□□□□□ -2.21
VIMP08670 RNU2-61P-201ENST00000411069 191 ntBASIC1.23□□□□□ -2.21
VIMP08670 AL163540.1-201ENST00000485382 386 ntBASIC1.23□□□□□ -2.21
VIMP08670 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.23□□□□□ -2.21
VIMP08670 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.23□□□□□ -2.21
VIMP08670 Y_RNA.661-201ENST00000516003 99 ntBASIC1.23□□□□□ -2.21
VIMP08670 AL645939.4-201ENST00000604495 135 ntBASIC1.23□□□□□ -2.21
VIMP08670 AC091925.1-201ENST00000623204 462 ntBASIC1.23□□□□□ -2.21
VIMP08670 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.23□□□□□ -2.21
VIMP08670 Y_RNA.230-201ENST00000364348 109 ntBASIC1.22□□□□□ -2.21
VIMP08670 SNORA2.2-201ENST00000365473 135 ntBASIC1.22□□□□□ -2.21
VIMP08670 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.22□□□□□ -2.21
VIMP08670 AC236972.2-201ENST00000434979 310 ntBASIC1.22□□□□□ -2.21
VIMP08670 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.22□□□□□ -2.21
VIMP08670 SNORD13-201ENST00000459299 104 ntBASIC1.22□□□□□ -2.21
VIMP08670 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.22□□□□□ -2.21
VIMP08670 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.22□□□□□ -2.21
VIMP08670 AC092447.9-201ENST00000603395 144 ntBASIC1.22□□□□□ -2.21
VIMP08670 AC022441.3-201ENST00000605737 136 ntBASIC1.22□□□□□ -2.21
VIMP08670 SNORD68-201ENST00000363214 84 ntBASIC1.21□□□□□ -2.22
VIMP08670 SNORA70.7-201ENST00000384159 133 ntBASIC1.21□□□□□ -2.22
VIMP08670 AL451046.2-201ENST00000403074 277 ntBASIC1.21□□□□□ -2.22
VIMP08670 CYCSP49-201ENST00000420810 319 ntBASIC1.21□□□□□ -2.22
VIMP08670 AF228730.4-201ENST00000421457 183 ntBASIC1.21□□□□□ -2.22
VIMP08670 AC104332.1-201ENST00000440471 797 ntBASIC1.21□□□□□ -2.22
VIMP08670 AC004832.4-201ENST00000608952 331 ntBASIC1.21□□□□□ -2.22
VIMP08670 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.21□□□□□ -2.22
VIMP08670 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.21□□□□□ -2.22
VIMP08670 RNU6-1175P-201ENST00000365200 107 ntBASIC1.2□□□□□ -2.22
VIMP08670 AC009474.2-201ENST00000451383 136 ntBASIC1.2□□□□□ -2.22
VIMP08670 AC004223.1-201ENST00000479840 271 ntBASIC1.2□□□□□ -2.22
VIMP08670 RNU6-322P-201ENST00000516010 103 ntBASIC1.2□□□□□ -2.22
VIMP08670 RNU6-947P-201ENST00000516264 106 ntBASIC1.2□□□□□ -2.22
VIMP08670 RNU4-77P-201ENST00000516692 156 ntBASIC1.2□□□□□ -2.22
VIMP08670 RN7SKP295-201ENST00000517264 153 ntBASIC1.2□□□□□ -2.22
VIMP08670 AC011604.1-201ENST00000545978 196 ntBASIC1.2□□□□□ -2.22
VIMP08670 MIR5188-201ENST00000583467 113 ntBASIC1.2□□□□□ -2.22
VIMP08670 Y_RNA.5-201ENST00000362334 102 ntBASIC1.19□□□□□ -2.22
VIMP08670 Y_RNA.39-201ENST00000362620 98 ntBASIC1.19□□□□□ -2.22
VIMP08670 Y_RNA.252-201ENST00000364556 101 ntBASIC1.19□□□□□ -2.22
VIMP08670 Y_RNA.329-201ENST00000365209 107 ntBASIC1.19□□□□□ -2.22
VIMP08670 SNORA25-201ENST00000384384 134 ntBASIC1.19□□□□□ -2.22
VIMP08670 Y_RNA.570-201ENST00000384750 101 ntBASIC1.19□□□□□ -2.22
VIMP08670 MIR891A-201ENST00000401237 79 ntBASIC1.19□□□□□ -2.22
VIMP08670 PIGPP3-201ENST00000425307 415 ntBASIC1.19□□□□□ -2.22
VIMP08670 AC120024.3-201ENST00000603167 156 ntBASIC1.19□□□□□ -2.22
VIMP08670 HSPE1P19-201ENST00000603327 295 ntBASIC1.19□□□□□ -2.22
VIMP08670 AL022345.2-201ENST00000606307 135 ntBASIC1.19□□□□□ -2.22
VIMP08670 Y_RNA.804-201ENST00000615262 101 ntBASIC1.19□□□□□ -2.22
VIMP08670 AL591926.4-201ENST00000616895 298 ntBASIC1.19□□□□□ -2.22
VIMP08670 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.19□□□□□ -2.22
VIMP08670 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.19□□□□□ -2.22
VIMP08670 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
VIMP08670 RNU6-833P-201ENST00000363486 107 ntBASIC1.18□□□□□ -2.22
VIMP08670 RNU6-163P-201ENST00000384396 106 ntBASIC1.18□□□□□ -2.22
VIMP08670 MIR526A1-201ENST00000384897 85 ntBASIC1.18□□□□□ -2.22
VIMP08670 MCFD2P1-201ENST00000417812 300 ntBASIC1.18□□□□□ -2.22
VIMP08670 AL591704.2-201ENST00000421658 181 ntBASIC1.18□□□□□ -2.22
VIMP08670 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.18□□□□□ -2.22
VIMP08670 AC048334.1-201ENST00000477975 159 ntBASIC1.18□□□□□ -2.22
VIMP08670 CYCTP-201ENST00000504253 315 ntBASIC1.18□□□□□ -2.22
VIMP08670 MTND3P22-201ENST00000510932 243 ntBASIC1.18□□□□□ -2.22
VIMP08670 SNORA25.10-201ENST00000515926 124 ntBASIC1.18□□□□□ -2.22
VIMP08670 SNORA31.2-201ENST00000516019 134 ntBASIC1.18□□□□□ -2.22
VIMP08670 RNU7-40P-201ENST00000516397 64 ntBASIC1.18□□□□□ -2.22
VIMP08670 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.18□□□□□ -2.22
VIMP08670 MIR4795-201ENST00000584182 89 ntBASIC1.18□□□□□ -2.22
VIMP08670 MIR4295-201ENST00000585286 85 ntBASIC1.18□□□□□ -2.22
VIMP08670 BX284668.6-201ENST00000606899 438 ntBASIC1.18□□□□□ -2.22
VIMP08670 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.18□□□□□ -2.22
VIMP08670 AC010205.1-201ENST00000616668 449 ntBASIC1.18□□□□□ -2.22
VIMP08670 AL606534.2-204ENST00000635008 178 ntBASIC1.18□□□□□ -2.22
VIMP08670 Y_RNA.80-201ENST00000362996 102 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 161.3 ms