Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC022441.3-201ENST00000605737 136 ntBASIC1.78□□□□□ -2.12
COL5A2P05997 AC037487.3-201ENST00000606668 112 ntBASIC1.78□□□□□ -2.12
COL5A2P05997 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.78□□□□□ -2.12
COL5A2P05997 SNORA25.1-201ENST00000362326 128 ntBASIC1.77□□□□□ -2.13
COL5A2P05997 Y_RNA.76-201ENST00000362931 109 ntBASIC1.77□□□□□ -2.13
COL5A2P05997 RNU6-944P-201ENST00000364023 107 ntBASIC1.77□□□□□ -2.13
COL5A2P05997 Y_RNA.230-201ENST00000364348 109 ntBASIC1.77□□□□□ -2.13
COL5A2P05997 RNU6-1305P-201ENST00000364353 104 ntBASIC1.77□□□□□ -2.13
COL5A2P05997 RNU6-662P-201ENST00000384253 104 ntBASIC1.77□□□□□ -2.13
COL5A2P05997 COX6CP14-201ENST00000469580 174 ntBASIC1.77□□□□□ -2.13
COL5A2P05997 RPS23P5-201ENST00000495419 428 ntBASIC1.77□□□□□ -2.13
COL5A2P05997 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.77□□□□□ -2.13
COL5A2P05997 Y_RNA.679-201ENST00000516416 91 ntBASIC1.77□□□□□ -2.13
COL5A2P05997 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.77□□□□□ -2.13
COL5A2P05997 AL512605.2-201ENST00000592972 256 ntBASIC1.77□□□□□ -2.13
COL5A2P05997 BX284668.6-201ENST00000606899 438 ntBASIC1.77□□□□□ -2.13
COL5A2P05997 SNORD11B-201ENST00000607707 90 ntBASIC1.77□□□□□ -2.13
COL5A2P05997 MIR6734-201ENST00000621166 68 ntBASIC1.77□□□□□ -2.13
COL5A2P05997 MIR3674-201ENST00000636576 68 ntBASIC1.77□□□□□ -2.13
COL5A2P05997 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
COL5A2P05997 AC080100.1-201ENST00000624239 5356 ntBASIC1.77□□□□□ -2.13
COL5A2P05997 RNU6-743P-201ENST00000364151 106 ntBASIC1.76□□□□□ -2.13
COL5A2P05997 RNU6-454P-201ENST00000364292 107 ntBASIC1.76□□□□□ -2.13
COL5A2P05997 RNU6-326P-201ENST00000365480 107 ntBASIC1.76□□□□□ -2.13
COL5A2P05997 RNU6-1083P-201ENST00000384022 107 ntBASIC1.76□□□□□ -2.13
COL5A2P05997 RNU6-1310P-201ENST00000384153 107 ntBASIC1.76□□□□□ -2.13
COL5A2P05997 MIR613-201ENST00000385248 95 ntBASIC1.76□□□□□ -2.13
COL5A2P05997 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.76□□□□□ -2.13
COL5A2P05997 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.76□□□□□ -2.13
COL5A2P05997 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.76□□□□□ -2.13
COL5A2P05997 RNU6-1199P-201ENST00000411249 104 ntBASIC1.76□□□□□ -2.13
COL5A2P05997 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.76□□□□□ -2.13
COL5A2P05997 MTCO1P5-201ENST00000433573 344 ntBASIC1.76□□□□□ -2.13
COL5A2P05997 AC005042.3-201ENST00000453230 174 ntBASIC1.76□□□□□ -2.13
COL5A2P05997 RNU7-14P-201ENST00000459331 62 ntBASIC1.76□□□□□ -2.13
COL5A2P05997 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.76□□□□□ -2.13
COL5A2P05997 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.76□□□□□ -2.13
COL5A2P05997 CYCSP23-201ENST00000519781 313 ntBASIC1.76□□□□□ -2.13
COL5A2P05997 CENPCP1-201ENST00000533085 2578 ntBASIC1.76□□□□□ -2.13
COL5A2P05997 MIR4423-201ENST00000580922 80 ntBASIC1.76□□□□□ -2.13
COL5A2P05997 uc_338.20-201ENST00000621563 178 ntBASIC1.76□□□□□ -2.13
COL5A2P05997 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.76□□□□□ -2.13
COL5A2P05997 MIR410-201ENST00000362222 80 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 RNU6-486P-201ENST00000363116 107 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 Y_RNA.274-201ENST00000364714 101 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 Y_RNA.329-201ENST00000365209 107 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 RNU6-1080P-201ENST00000383982 107 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 RNU6-514P-201ENST00000384208 107 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 SNORD14D-201ENST00000384390 87 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 RNU6-1274P-201ENST00000384557 107 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 MIR548B-201ENST00000385247 97 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
COL5A2P05997 AC009310.1-201ENST00000414414 451 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 AL390729.2-201ENST00000416137 156 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 RPL30P4-201ENST00000429309 333 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.75□□□□□ -2.13
COL5A2P05997 HMGN2P18-201ENST00000450680 270 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 PRELID3BP1-201ENST00000457142 540 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.75□□□□□ -2.13
COL5A2P05997 SCARNA3-201ENST00000517097 143 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 AL137100.2-201ENST00000555786 315 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 AC026470.2-201ENST00000561492 181 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.75□□□□□ -2.13
COL5A2P05997 AC006380.1-201ENST00000603598 186 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 MIR6779-201ENST00000617283 64 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.75□□□□□ -2.13
COL5A2P05997 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 RNU4-80P-201ENST00000363200 141 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 SNORD114-27-201ENST00000363766 70 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 RNU6-200P-201ENST00000364743 107 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 Y_RNA.297-201ENST00000364950 91 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 Y_RNA.518-201ENST00000384552 113 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 SNORD23.1-201ENST00000408212 104 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 MIR1298-201ENST00000408783 112 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 Y_RNA.590-201ENST00000410140 107 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 RNA5SP504-201ENST00000410676 117 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 AC024067.1-201ENST00000426199 223 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 AC091959.1-201ENST00000495857 238 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.75□□□□□ -2.13
COL5A2P05997 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.75□□□□□ -2.13
COL5A2P05997 SNORD116-28-201ENST00000516123 91 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 RNY3P16-201ENST00000516338 101 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 RNU6-344P-201ENST00000516635 111 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 RNU6-586P-201ENST00000517265 104 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.75□□□□□ -2.13
COL5A2P05997 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.75□□□□□ -2.13
COL5A2P05997 DEFB117-201ENST00000602356 141 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 AC009779.6-201ENST00000603972 165 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 U2.14-201ENST00000615943 113 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 AL449363.1-201ENST00000617815 186 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 AC127459.3-201ENST00000624328 466 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 AC068205.3-201ENST00000636385 468 ntBASIC1.75□□□□□ -2.13
COL5A2P05997 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.74□□□□□ -2.13
COL5A2P05997 Y_RNA.199-201ENST00000364014 102 ntBASIC1.74□□□□□ -2.13
COL5A2P05997 Y_RNA.200-201ENST00000364018 102 ntBASIC1.74□□□□□ -2.13
COL5A2P05997 Y_RNA.292-201ENST00000364904 97 ntBASIC1.74□□□□□ -2.13
COL5A2P05997 RNU6-1289P-201ENST00000384431 106 ntBASIC1.74□□□□□ -2.13
COL5A2P05997 RNU2-54P-201ENST00000410299 190 ntBASIC1.74□□□□□ -2.13
COL5A2P05997 SRIP3-201ENST00000413200 219 ntBASIC1.74□□□□□ -2.13
COL5A2P05997 RNU4-71P-201ENST00000516258 113 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms