| MT1E | P04732 | APELA-204 | ENST00000515275 | 551 nt | APPRIS P1 TSL 3 BASIC | -1.37 | □□□□□ -2.63 | | |
| MT1E | P04732 | RNU7-28P-201 | ENST00000516759 | 62 nt | BASIC | -1.37 | □□□□□ -2.63 | | |
| MT1E | P04732 | LINC02294-201 | ENST00000549330 | 497 nt | TSL 2 BASIC | -1.37 | □□□□□ -2.63 | | |
| MT1E | P04732 | MIR4473-201 | ENST00000583731 | 91 nt | BASIC | -1.37 | □□□□□ -2.63 | | |
| MT1E | P04732 | MIR6854-201 | ENST00000614935 | 69 nt | BASIC | -1.37 | □□□□□ -2.63 | | |
| MT1E | P04732 | MIR664B-201 | ENST00000626756 | 61 nt | BASIC | -1.37 | □□□□□ -2.63 | | |
| MT1E | P04732 | STARD6-201 | ENST00000307844 | 663 nt | APPRIS P1 TSL 1 (best) BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | DEFB131A-201 | ENST00000334879 | 213 nt | APPRIS P1 TSL 1 (best) BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | Y_RNA.62-201 | ENST00000362840 | 99 nt | BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | RNY1P11-201 | ENST00000363759 | 113 nt | BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | RNU6-343P-201 | ENST00000364709 | 104 nt | BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | RNU6-354P-201 | ENST00000383862 | 107 nt | BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | RNU6-637P-201 | ENST00000384050 | 107 nt | BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | RNU6-610P-201 | ENST00000384264 | 107 nt | BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | RNU6-83P-201 | ENST00000384568 | 112 nt | BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | Y_RNA.529-201 | ENST00000384586 | 119 nt | BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | MIR181B2-201 | ENST00000385004 | 89 nt | BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | MIR15B-201 | ENST00000385045 | 98 nt | BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | SNORA40C-201 | ENST00000391285 | 128 nt | BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | ZNF736P10Y-201 | ENST00000403990 | 1110 nt | BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | MTCYBP2-201 | ENST00000407745 | 171 nt | BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | MIR1283-1-201 | ENST00000408494 | 87 nt | BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | RNU6-588P-201 | ENST00000410281 | 105 nt | BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | RNU6-1025P-201 | ENST00000410629 | 104 nt | BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | PIGPP3-201 | ENST00000425307 | 415 nt | BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | RNA5SP484-201 | ENST00000458857 | 111 nt | BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | SNORD123-201 | ENST00000459473 | 70 nt | BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | AC108019.1-201 | ENST00000512540 | 175 nt | BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | DEFB131B-201 | ENST00000530210 | 213 nt | APPRIS P1 TSL 1 (best) BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | AC024405.2-202 | ENST00000532731 | 184 nt | BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | AC004217.3-201 | ENST00000551552 | 878 nt | BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | MIR3139-201 | ENST00000579145 | 76 nt | BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | AL158042.1-201 | ENST00000605338 | 460 nt | BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | AC104073.3-201 | ENST00000610942 | 955 nt | BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | MIR8068-201 | ENST00000618032 | 68 nt | BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | MIR6818-201 | ENST00000621576 | 65 nt | BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | AL049777.1-201 | ENST00000622740 | 518 nt | BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | SLC8A1-AS1-230 | ENST00000627538 | 212 nt | TSL 5 BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | SNORD98-201 | ENST00000636377 | 67 nt | BASIC | -1.38 | □□□□□ -2.63 | | |
| MT1E | P04732 | Y_RNA.13-201 | ENST00000362403 | 112 nt | BASIC | -1.39 | □□□□□ -2.63 | | |
| MT1E | P04732 | RNU6-973P-201 | ENST00000364690 | 107 nt | BASIC | -1.39 | □□□□□ -2.63 | | |
| MT1E | P04732 | SNORA24-201 | ENST00000384096 | 131 nt | BASIC | -1.39 | □□□□□ -2.63 | | |
| MT1E | P04732 | RNU6-291P-201 | ENST00000384720 | 107 nt | BASIC | -1.39 | □□□□□ -2.63 | | |
| MT1E | P04732 | MIR29B1-201 | ENST00000385015 | 81 nt | BASIC | -1.39 | □□□□□ -2.63 | | |
| MT1E | P04732 | SNORA75.4-201 | ENST00000391278 | 119 nt | BASIC | -1.39 | □□□□□ -2.63 | | |
| MT1E | P04732 | MTATP6P17-201 | ENST00000431030 | 672 nt | BASIC | -1.39 | □□□□□ -2.63 | | |
| MT1E | P04732 | UQCRBP2-201 | ENST00000447827 | 297 nt | BASIC | -1.39 | □□□□□ -2.63 | | |
| MT1E | P04732 | SLC2A13P1-201 | ENST00000531560 | 322 nt | BASIC | -1.39 | □□□□□ -2.63 | | |
| MT1E | P04732 | AC108747.1-201 | ENST00000609508 | 535 nt | BASIC | -1.39 | □□□□□ -2.63 | | |
| MT1E | P04732 | MIR6874-201 | ENST00000635894 | 71 nt | BASIC | -1.39 | □□□□□ -2.63 | | |
| MT1E | P04732 | Z97988.1-201 | ENST00000637697 | 135 nt | BASIC | -1.39 | □□□□□ -2.63 | | |
| MT1E | P04732 | RNU6-28P-201 | ENST00000362378 | 107 nt | BASIC | -1.4 | □□□□□ -2.63 | | |
| MT1E | P04732 | Y_RNA.250-201 | ENST00000364542 | 110 nt | BASIC | -1.4 | □□□□□ -2.63 | | |
| MT1E | P04732 | RNU6-142P-201 | ENST00000384019 | 107 nt | BASIC | -1.4 | □□□□□ -2.63 | | |
| MT1E | P04732 | MT-TM-201 | ENST00000387377 | 68 nt | BASIC | -1.4 | □□□□□ -2.63 | | |
| MT1E | P04732 | RNU2-51P-201 | ENST00000410708 | 197 nt | BASIC | -1.4 | □□□□□ -2.63 | | |
| MT1E | P04732 | AL353813.1-201 | ENST00000440700 | 253 nt | BASIC | -1.4 | □□□□□ -2.63 | | |
| MT1E | P04732 | AL158053.1-201 | ENST00000441503 | 453 nt | BASIC | -1.4 | □□□□□ -2.63 | | |
| MT1E | P04732 | ZNF736P8Y-201 | ENST00000451913 | 669 nt | BASIC | -1.4 | □□□□□ -2.63 | | |
| MT1E | P04732 | MTCO1P31-201 | ENST00000506355 | 492 nt | BASIC | -1.4 | □□□□□ -2.63 | | |
| MT1E | P04732 | RNU6-1261P-201 | ENST00000517194 | 104 nt | BASIC | -1.4 | □□□□□ -2.63 | | |
| MT1E | P04732 | AC060788.1-201 | ENST00000521318 | 469 nt | BASIC | -1.4 | □□□□□ -2.63 | | |
| MT1E | P04732 | NARSP2-202 | ENST00000522022 | 349 nt | TSL 3 BASIC | -1.4 | □□□□□ -2.63 | | |
| MT1E | P04732 | AC115990.1-201 | ENST00000526957 | 301 nt | BASIC | -1.4 | □□□□□ -2.63 | | |
| MT1E | P04732 | AC020891.3-201 | ENST00000560011 | 363 nt | TSL 3 BASIC | -1.4 | □□□□□ -2.63 | | |
| MT1E | P04732 | AC018714.1-201 | ENST00000605028 | 208 nt | BASIC | -1.4 | □□□□□ -2.63 | | |
| MT1E | P04732 | AL133255.1-201 | ENST00000606374 | 441 nt | BASIC | -1.4 | □□□□□ -2.63 | | |
| MT1E | P04732 | AC087683.2-201 | ENST00000611384 | 326 nt | BASIC | -1.4 | □□□□□ -2.63 | | |
| MT1E | P04732 | uc_338.4-201 | ENST00000616635 | 176 nt | BASIC | -1.4 | □□□□□ -2.63 | | |
| MT1E | P04732 | MIR6740-201 | ENST00000618268 | 113 nt | BASIC | -1.4 | □□□□□ -2.63 | | |
| MT1E | P04732 | AC092608.3-201 | ENST00000625017 | 386 nt | BASIC | -1.4 | □□□□□ -2.63 | | |
| MT1E | P04732 | NCBP1-205 | ENST00000629069 | 249 nt | TSL 5 BASIC | -1.4 | □□□□□ -2.63 | | |
| MT1E | P04732 | RNU6-1062P-201 | ENST00000383908 | 107 nt | BASIC | -1.41 | □□□□□ -2.64 | | |
| MT1E | P04732 | RNU6-708P-201 | ENST00000384217 | 107 nt | BASIC | -1.41 | □□□□□ -2.64 | | |
| MT1E | P04732 | RNU6-535P-201 | ENST00000384722 | 107 nt | BASIC | -1.41 | □□□□□ -2.64 | | |
| MT1E | P04732 | MIR487B-201 | ENST00000385021 | 84 nt | BASIC | -1.41 | □□□□□ -2.64 | | |
| MT1E | P04732 | RPS29P13-201 | ENST00000402041 | 169 nt | BASIC | -1.41 | □□□□□ -2.64 | | |
| MT1E | P04732 | AL358934.1-201 | ENST00000432346 | 324 nt | BASIC | -1.41 | □□□□□ -2.64 | | |
| MT1E | P04732 | MTND3P4-201 | ENST00000453537 | 303 nt | BASIC | -1.41 | □□□□□ -2.64 | | |
| MT1E | P04732 | RNU2-11P-201 | ENST00000459191 | 187 nt | BASIC | -1.41 | □□□□□ -2.64 | | |
| MT1E | P04732 | AC022447.4-201 | ENST00000504053 | 364 nt | BASIC | -1.41 | □□□□□ -2.64 | | |
| MT1E | P04732 | RNU7-99P-201 | ENST00000516271 | 62 nt | BASIC | -1.41 | □□□□□ -2.64 | | |
| MT1E | P04732 | AC084365.1-201 | ENST00000552470 | 310 nt | TSL 3 BASIC | -1.41 | □□□□□ -2.64 | | |
| MT1E | P04732 | AC120024.3-201 | ENST00000603167 | 156 nt | BASIC | -1.41 | □□□□□ -2.64 | | |
| MT1E | P04732 | AL139418.1-201 | ENST00000613613 | 177 nt | BASIC | -1.41 | □□□□□ -2.64 | | |
| MT1E | P04732 | Y_RNA.220-201 | ENST00000364244 | 109 nt | BASIC | -1.42 | □□□□□ -2.64 | | |
| MT1E | P04732 | Y_RNA.284-201 | ENST00000364806 | 102 nt | BASIC | -1.42 | □□□□□ -2.64 | | |
| MT1E | P04732 | RNU6-1165P-201 | ENST00000410119 | 107 nt | BASIC | -1.42 | □□□□□ -2.64 | | |
| MT1E | P04732 | RNA5SP201-201 | ENST00000410316 | 124 nt | BASIC | -1.42 | □□□□□ -2.64 | | |
| MT1E | P04732 | MTND1P32-201 | ENST00000433043 | 938 nt | BASIC | -1.42 | □□□□□ -2.64 | | |
| MT1E | P04732 | MTCYBP39-201 | ENST00000437562 | 491 nt | BASIC | -1.42 | □□□□□ -2.64 | | |
| MT1E | P04732 | COX7BP2-201 | ENST00000437976 | 242 nt | BASIC | -1.42 | □□□□□ -2.64 | | |
| MT1E | P04732 | AC097501.2-201 | ENST00000502668 | 305 nt | TSL 5 BASIC | -1.42 | □□□□□ -2.64 | | |
| MT1E | P04732 | SNORA40.17-201 | ENST00000517256 | 115 nt | BASIC | -1.42 | □□□□□ -2.64 | | |
| MT1E | P04732 | MIR544B-201 | ENST00000582372 | 78 nt | BASIC | -1.42 | □□□□□ -2.64 | | |
| MT1E | P04732 | AC008752.3-201 | ENST00000588113 | 712 nt | BASIC | -1.42 | □□□□□ -2.64 | | |
| MT1E | P04732 | AC093783.1-201 | ENST00000612976 | 329 nt | BASIC | -1.42 | □□□□□ -2.64 | | |
| MT1E | P04732 | DLX6-AS1_2.1-201 | ENST00000613701 | 207 nt | BASIC | -1.42 | □□□□□ -2.64 | | |
| MT1E | P04732 | uc_338.10-201 | ENST00000621872 | 182 nt | BASIC | -1.42 | □□□□□ -2.64 | | |
| MT1E | P04732 | CR2-207 | ENST00000640301 | 151 nt | TSL 1 (best) BASIC | -1.42 | □□□□□ -2.64 | | |