Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AP002004.2-201ENST00000531656 154 ntBASIC0.77□□□□□ -2.29
CD74P04233 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.77□□□□□ -2.29
CD74P04233 AC091178.2-201ENST00000584401 117 ntBASIC0.77□□□□□ -2.29
CD74P04233 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
CD74P04233 AC080078.2-201ENST00000603766 501 ntBASIC0.77□□□□□ -2.29
CD74P04233 AL513534.2-201ENST00000603836 250 ntBASIC0.77□□□□□ -2.29
CD74P04233 GHRLOS.1-201ENST00000610995 70 ntBASIC0.77□□□□□ -2.29
CD74P04233 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.77□□□□□ -2.29
CD74P04233 U6atac.1-201ENST00000616025 117 ntBASIC0.77□□□□□ -2.29
CD74P04233 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.76□□□□□ -2.29
CD74P04233 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CD74P04233 MT-TL1-201ENST00000386347 75 ntBASIC0.76□□□□□ -2.29
CD74P04233 SNORA69.1-201ENST00000390904 137 ntBASIC0.76□□□□□ -2.29
CD74P04233 AL451046.2-201ENST00000403074 277 ntBASIC0.76□□□□□ -2.29
CD74P04233 Y_RNA.646-201ENST00000410980 101 ntBASIC0.76□□□□□ -2.29
CD74P04233 RPEP5-201ENST00000441137 268 ntBASIC0.76□□□□□ -2.29
CD74P04233 FGF7P6-202ENST00000451282 293 ntBASIC0.76□□□□□ -2.29
CD74P04233 AL049830.1-201ENST00000468034 425 ntBASIC0.76□□□□□ -2.29
CD74P04233 AC022493.2-201ENST00000506122 481 ntBASIC0.76□□□□□ -2.29
CD74P04233 RNU6-917P-201ENST00000516294 104 ntBASIC0.76□□□□□ -2.29
CD74P04233 RNU6-1096P-201ENST00000517089 102 ntBASIC0.76□□□□□ -2.29
CD74P04233 SNORA70.22-201ENST00000517160 124 ntBASIC0.76□□□□□ -2.29
CD74P04233 AL020996.3-201ENST00000606617 222 ntBASIC0.76□□□□□ -2.29
CD74P04233 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.76□□□□□ -2.29
CD74P04233 AC004467.1-201ENST00000615678 330 ntBASIC0.76□□□□□ -2.29
CD74P04233 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.76□□□□□ -2.29
CD74P04233 TPTEP1-208ENST00000636884 213 ntBASIC0.76□□□□□ -2.29
CD74P04233 MIR6767-201ENST00000637302 66 ntBASIC0.76□□□□□ -2.29
CD74P04233 RNU6-961P-201ENST00000363893 105 ntBASIC0.75□□□□□ -2.29
CD74P04233 Y_RNA.279-201ENST00000364763 95 ntBASIC0.75□□□□□ -2.29
CD74P04233 SNORD81.2-201ENST00000365153 76 ntBASIC0.75□□□□□ -2.29
CD74P04233 RNU6-310P-201ENST00000384655 107 ntBASIC0.75□□□□□ -2.29
CD74P04233 MIR19B1-201ENST00000384829 87 ntBASIC0.75□□□□□ -2.29
CD74P04233 MIR562-201ENST00000384894 95 ntBASIC0.75□□□□□ -2.29
CD74P04233 MIR625-201ENST00000385047 85 ntBASIC0.75□□□□□ -2.29
CD74P04233 SNORD41-201ENST00000386967 70 ntBASIC0.75□□□□□ -2.29
CD74P04233 RNU6-910P-201ENST00000390844 107 ntBASIC0.75□□□□□ -2.29
CD74P04233 RNU6-1156P-201ENST00000410365 100 ntBASIC0.75□□□□□ -2.29
CD74P04233 Y_RNA.621-201ENST00000411065 96 ntBASIC0.75□□□□□ -2.29
CD74P04233 RNU2-64P-201ENST00000411315 191 ntBASIC0.75□□□□□ -2.29
CD74P04233 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.75□□□□□ -2.29
CD74P04233 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.75□□□□□ -2.29
CD74P04233 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.75□□□□□ -2.29
CD74P04233 AC055872.1-201ENST00000570978 278 ntBASIC0.75□□□□□ -2.29
CD74P04233 MIR4653-201ENST00000585107 83 ntBASIC0.75□□□□□ -2.29
CD74P04233 AL117336.2-201ENST00000602435 335 ntBASIC0.75□□□□□ -2.29
CD74P04233 AC092794.1-201ENST00000612734 582 ntBASIC0.75□□□□□ -2.29
CD74P04233 AC087588.2-201ENST00000617667 426 ntBASIC0.75□□□□□ -2.29
CD74P04233 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CD74P04233 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.74□□□□□ -2.29
CD74P04233 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
CD74P04233 MIR410-201ENST00000362222 80 ntBASIC0.74□□□□□ -2.29
CD74P04233 RNU4-41P-201ENST00000364426 143 ntBASIC0.74□□□□□ -2.29
CD74P04233 RNU6-117P-201ENST00000365415 107 ntBASIC0.74□□□□□ -2.29
CD74P04233 RNU6-1310P-201ENST00000384153 107 ntBASIC0.74□□□□□ -2.29
CD74P04233 MIR489-201ENST00000384923 84 ntBASIC0.74□□□□□ -2.29
CD74P04233 Y_RNA.592-201ENST00000410274 109 ntBASIC0.74□□□□□ -2.29
CD74P04233 RNA5SP511-201ENST00000410487 115 ntBASIC0.74□□□□□ -2.29
CD74P04233 MTND4P28-201ENST00000426217 387 ntBASIC0.74□□□□□ -2.29
CD74P04233 MTND1P2-201ENST00000430604 821 ntBASIC0.74□□□□□ -2.29
CD74P04233 Z98949.2-201ENST00000440996 144 ntBASIC0.74□□□□□ -2.29
CD74P04233 RPL30P15-201ENST00000457129 321 ntBASIC0.74□□□□□ -2.29
CD74P04233 RNU6-322P-201ENST00000516010 103 ntBASIC0.74□□□□□ -2.29
CD74P04233 ACA64.5-201ENST00000516207 127 ntBASIC0.74□□□□□ -2.29
CD74P04233 RNA5SP220-201ENST00000516298 104 ntBASIC0.74□□□□□ -2.29
CD74P04233 RNU7-28P-201ENST00000516759 62 ntBASIC0.74□□□□□ -2.29
CD74P04233 AC090049.2-201ENST00000550377 109 ntBASIC0.74□□□□□ -2.29
CD74P04233 AL078603.1-201ENST00000603824 313 ntBASIC0.74□□□□□ -2.29
CD74P04233 AC211469.2-201ENST00000605461 205 ntBASIC0.74□□□□□ -2.29
CD74P04233 HSBP1P2-201ENST00000299671 229 ntBASIC0.73□□□□□ -2.29
CD74P04233 SNORD68-201ENST00000363214 84 ntBASIC0.73□□□□□ -2.29
CD74P04233 SNORD114-27-201ENST00000363766 70 ntBASIC0.73□□□□□ -2.29
CD74P04233 RNU6-1188P-201ENST00000363795 107 ntBASIC0.73□□□□□ -2.29
CD74P04233 SNORD114-2-201ENST00000363953 78 ntBASIC0.73□□□□□ -2.29
CD74P04233 SNORA2.2-201ENST00000365473 135 ntBASIC0.73□□□□□ -2.29
CD74P04233 RNU6-890P-201ENST00000384121 107 ntBASIC0.73□□□□□ -2.29
CD74P04233 MIR520G-201ENST00000385064 90 ntBASIC0.73□□□□□ -2.29
CD74P04233 MIR146A-201ENST00000385201 99 ntBASIC0.73□□□□□ -2.29
CD74P04233 MIR653-201ENST00000385279 96 ntBASIC0.73□□□□□ -2.29
CD74P04233 SNORD12-201ENST00000391002 90 ntBASIC0.73□□□□□ -2.29
CD74P04233 RNA5SP482-201ENST00000391269 118 ntBASIC0.73□□□□□ -2.29
CD74P04233 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.73□□□□□ -2.29
CD74P04233 Y_RNA.605-201ENST00000410577 105 ntBASIC0.73□□□□□ -2.29
CD74P04233 RNU5A-5P-201ENST00000411054 116 ntBASIC0.73□□□□□ -2.29
CD74P04233 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.73□□□□□ -2.29
CD74P04233 PIGPP3-201ENST00000425307 415 ntBASIC0.73□□□□□ -2.29
CD74P04233 ELOCP24-201ENST00000456370 334 ntBASIC0.73□□□□□ -2.29
CD74P04233 SNORA31.4-201ENST00000516049 129 ntBASIC0.73□□□□□ -2.29
CD74P04233 RNU6-351P-201ENST00000516097 100 ntBASIC0.73□□□□□ -2.29
CD74P04233 RNU6-1337P-201ENST00000516525 95 ntBASIC0.73□□□□□ -2.29
CD74P04233 Y_RNA.691-201ENST00000516611 103 ntBASIC0.73□□□□□ -2.29
CD74P04233 RNU6-113P-201ENST00000516653 101 ntBASIC0.73□□□□□ -2.29
CD74P04233 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.73□□□□□ -2.29
CD74P04233 MIR5690-201ENST00000583739 73 ntBASIC0.73□□□□□ -2.29
CD74P04233 FAM106DP-201ENST00000586416 501 ntBASIC0.73□□□□□ -2.29
CD74P04233 AC011476.5-201ENST00000615594 130 ntBASIC0.73□□□□□ -2.29
CD74P04233 RMST_2.1-201ENST00000617263 136 ntBASIC0.73□□□□□ -2.29
CD74P04233 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.73□□□□□ -2.29
CD74P04233 MIRLET7C-201ENST00000362160 84 ntBASIC0.72□□□□□ -2.29
CD74P04233 RNU4-79P-201ENST00000362764 141 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms