Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AL158042.1-201ENST00000605338 460 ntBASIC-1.01□□□□□ -2.57
APOBP04114 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.01□□□□□ -2.57
APOBP04114 MIR544A-201ENST00000384855 91 ntBASIC-1.01□□□□□ -2.57
APOBP04114 MIR516B1-201ENST00000385211 90 ntBASIC-1.01□□□□□ -2.57
APOBP04114 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-1.01□□□□□ -2.57
APOBP04114 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-1.01□□□□□ -2.57
APOBP04114 RNU7-59P-201ENST00000459101 61 ntBASIC-1.01□□□□□ -2.57
APOBP04114 SNORA31.14-201ENST00000516728 116 ntBASIC-1.01□□□□□ -2.57
APOBP04114 RNU6-914P-201ENST00000516749 109 ntBASIC-1.01□□□□□ -2.57
APOBP04114 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-1.01□□□□□ -2.57
APOBP04114 AC069431.2-201ENST00000604149 1099 ntBASIC-1.01□□□□□ -2.57
APOBP04114 AC026410.2-201ENST00000460281 156 ntBASIC-1.01□□□□□ -2.57
APOBP04114 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-1.01□□□□□ -2.57
APOBP04114 YWHAEP3-201ENST00000582767 121 ntBASIC-1.01□□□□□ -2.57
APOBP04114 AL008636.1-201ENST00000625038 1018 ntBASIC-1.01□□□□□ -2.57
APOBP04114 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-1.02□□□□□ -2.57
APOBP04114 AC104458.1-201ENST00000608243 463 ntBASIC-1.02□□□□□ -2.57
APOBP04114 MIR1283-1-201ENST00000408494 87 ntBASIC-1.02□□□□□ -2.57
APOBP04114 RNU2-54P-201ENST00000410299 190 ntBASIC-1.02□□□□□ -2.57
APOBP04114 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-1.02□□□□□ -2.57
APOBP04114 MIR4264-201ENST00000583520 66 ntBASIC-1.02□□□□□ -2.57
APOBP04114 AP001330.5-201ENST00000607176 411 ntBASIC-1.02□□□□□ -2.57
APOBP04114 RNU6-900P-201ENST00000384498 102 ntBASIC-1.02□□□□□ -2.57
APOBP04114 RNU6-1127P-201ENST00000384580 107 ntBASIC-1.02□□□□□ -2.57
APOBP04114 AC010486.3-201ENST00000511602 785 ntBASIC-1.02□□□□□ -2.57
APOBP04114 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.02□□□□□ -2.57
APOBP04114 AC108747.1-201ENST00000609508 535 ntBASIC-1.02□□□□□ -2.57
APOBP04114 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.03□□□□□ -2.57
APOBP04114 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.03□□□□□ -2.57
APOBP04114 RNU6-455P-201ENST00000384681 107 ntBASIC-1.03□□□□□ -2.57
APOBP04114 MIR452-201ENST00000385020 85 ntBASIC-1.03□□□□□ -2.57
APOBP04114 MIR8485-201ENST00000401372 91 ntBASIC-1.03□□□□□ -2.57
APOBP04114 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.03□□□□□ -2.57
APOBP04114 AC099785.1-201ENST00000605697 437 ntBASIC-1.03□□□□□ -2.57
APOBP04114 U6.101-201ENST00000637707 76 ntBASIC-1.03□□□□□ -2.57
APOBP04114 RNU6-727P-201ENST00000363592 107 ntBASIC-1.03□□□□□ -2.57
APOBP04114 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.03□□□□□ -2.57
APOBP04114 RNU6-1025P-201ENST00000410629 104 ntBASIC-1.03□□□□□ -2.57
APOBP04114 RNU4-83P-201ENST00000410863 133 ntBASIC-1.03□□□□□ -2.57
APOBP04114 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-1.03□□□□□ -2.57
APOBP04114 AC096586.1-201ENST00000610267 561 ntBASIC-1.03□□□□□ -2.57
APOBP04114 AC005520.5-201ENST00000613926 164 ntBASIC-1.03□□□□□ -2.57
APOBP04114 U6.73-201ENST00000619194 103 ntBASIC-1.03□□□□□ -2.57
APOBP04114 MIR664B-201ENST00000626756 61 ntBASIC-1.03□□□□□ -2.57
APOBP04114 SNORA75.4-201ENST00000391278 119 ntBASIC-1.03□□□□□ -2.57
APOBP04114 RNU4-61P-201ENST00000411243 107 ntBASIC-1.03□□□□□ -2.57
APOBP04114 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-1.03□□□□□ -2.57
APOBP04114 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-1.03□□□□□ -2.57
APOBP04114 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.03□□□□□ -2.57
APOBP04114 AC105417.1-201ENST00000514691 285 ntBASIC-1.03□□□□□ -2.57
APOBP04114 LARP7P2-201ENST00000575306 125 ntBASIC-1.03□□□□□ -2.57
APOBP04114 AC245014.2-201ENST00000603689 287 ntBASIC-1.03□□□□□ -2.57
APOBP04114 AC091946.2-201ENST00000606105 291 ntBASIC-1.03□□□□□ -2.57
APOBP04114 AC010975.3-201ENST00000618727 978 ntBASIC-1.03□□□□□ -2.57
APOBP04114 AC005002.2-201ENST00000438228 269 ntBASIC-1.03□□□□□ -2.57
APOBP04114 RPL39P25-201ENST00000449384 154 ntBASIC-1.03□□□□□ -2.57
APOBP04114 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.04□□□□□ -2.58
APOBP04114 SNORA1B-201ENST00000362535 133 ntBASIC-1.04□□□□□ -2.58
APOBP04114 RNU4-92P-201ENST00000363783 136 ntBASIC-1.04□□□□□ -2.58
APOBP04114 MTATP6P26-201ENST00000445926 662 ntBASIC-1.04□□□□□ -2.58
APOBP04114 AL512347.1-201ENST00000566420 503 ntBASIC-1.04□□□□□ -2.58
APOBP04114 AC027449.1-201ENST00000608890 407 ntBASIC-1.04□□□□□ -2.58
APOBP04114 RNU6-819P-201ENST00000364116 107 ntBASIC-1.04□□□□□ -2.58
APOBP04114 SNORD56B-201ENST00000384713 71 ntBASIC-1.04□□□□□ -2.58
APOBP04114 AC078809.1-201ENST00000427601 140 ntBASIC-1.04□□□□□ -2.58
APOBP04114 SNORD116-30-201ENST00000516468 85 ntBASIC-1.04□□□□□ -2.58
APOBP04114 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-1.04□□□□□ -2.58
APOBP04114 RNU6-704P-201ENST00000364162 103 ntBASIC-1.04□□□□□ -2.58
APOBP04114 SNORD114-29-201ENST00000364819 70 ntBASIC-1.04□□□□□ -2.58
APOBP04114 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-1.04□□□□□ -2.58
APOBP04114 ZNF736P5Y-201ENST00000451173 805 ntBASIC-1.04□□□□□ -2.58
APOBP04114 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-1.04□□□□□ -2.58
APOBP04114 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-1.04□□□□□ -2.58
APOBP04114 SERF1AP1-201ENST00000514575 187 ntBASIC-1.04□□□□□ -2.58
APOBP04114 RNU6-341P-201ENST00000516973 96 ntBASIC-1.04□□□□□ -2.58
APOBP04114 AC022306.3-201ENST00000619930 550 ntBASIC-1.04□□□□□ -2.58
APOBP04114 Y_RNA.151-201ENST00000363566 112 ntBASIC-1.05□□□□□ -2.58
APOBP04114 RNU2-28P-201ENST00000410457 189 ntBASIC-1.05□□□□□ -2.58
APOBP04114 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.05□□□□□ -2.58
APOBP04114 AC116353.2-201ENST00000505332 712 ntBASIC-1.05□□□□□ -2.58
APOBP04114 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.05□□□□□ -2.58
APOBP04114 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-1.05□□□□□ -2.58
APOBP04114 COX7BP2-201ENST00000437976 242 ntBASIC-1.05□□□□□ -2.58
APOBP04114 AC108019.1-201ENST00000512540 175 ntBASIC-1.05□□□□□ -2.58
APOBP04114 RNU6-1261P-201ENST00000517194 104 ntBASIC-1.05□□□□□ -2.58
APOBP04114 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.05□□□□□ -2.58
APOBP04114 MTATP6P2-201ENST00000603319 678 ntBASIC-1.05□□□□□ -2.58
APOBP04114 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.05□□□□□ -2.58
APOBP04114 MTND1P11-201ENST00000456661 876 ntBASIC-1.05□□□□□ -2.58
APOBP04114 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.05□□□□□ -2.58
APOBP04114 SNORD41.1-201ENST00000391000 69 ntBASIC-1.05□□□□□ -2.58
APOBP04114 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-1.05□□□□□ -2.58
APOBP04114 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-1.05□□□□□ -2.58
APOBP04114 RNU7-99P-201ENST00000516271 62 ntBASIC-1.05□□□□□ -2.58
APOBP04114 Y_RNA.687-201ENST00000516558 91 ntBASIC-1.05□□□□□ -2.58
APOBP04114 uc_338.4-201ENST00000616635 176 ntBASIC-1.05□□□□□ -2.58
APOBP04114 AC126544.2-201ENST00000625174 749 ntBASIC-1.05□□□□□ -2.58
APOBP04114 SNORD45.3-201ENST00000363836 72 ntBASIC-1.06□□□□□ -2.58
APOBP04114 RNY3P11-201ENST00000364153 102 ntBASIC-1.06□□□□□ -2.58
APOBP04114 MT-TF-201ENST00000387314 71 ntBASIC-1.06□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms