Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 MTATP6P24-201ENST00000576835 677 ntBASIC-0.11□□□□□ -2.43
APOA1P02647 MIR4771-2-201ENST00000577758 74 ntBASIC-0.11□□□□□ -2.43
APOA1P02647 MIR4514-201ENST00000581410 57 ntBASIC-0.11□□□□□ -2.43
APOA1P02647 MIR4771-1-201ENST00000582617 74 ntBASIC-0.11□□□□□ -2.43
APOA1P02647 AP001330.5-201ENST00000607176 411 ntBASIC-0.11□□□□□ -2.43
APOA1P02647 AC092954.2-201ENST00000609103 430 ntBASIC-0.11□□□□□ -2.43
APOA1P02647 AL357075.2-201ENST00000614906 189 ntBASIC-0.11□□□□□ -2.43
APOA1P02647 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.12□□□□□ -2.43
APOA1P02647 Y_RNA.231-201ENST00000364358 102 ntBASIC-0.12□□□□□ -2.43
APOA1P02647 SNORD28B-201ENST00000390993 75 ntBASIC-0.12□□□□□ -2.43
APOA1P02647 RNU4-55P-201ENST00000410731 137 ntBASIC-0.12□□□□□ -2.43
APOA1P02647 AL139396.1-201ENST00000421137 167 ntBASIC-0.12□□□□□ -2.43
APOA1P02647 AL603825.1-201ENST00000438481 80 ntBASIC-0.12□□□□□ -2.43
APOA1P02647 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.12□□□□□ -2.43
APOA1P02647 RNA5SP94-201ENST00000516917 108 ntBASIC-0.12□□□□□ -2.43
APOA1P02647 AC090617.3-201ENST00000573670 475 ntBASIC-0.12□□□□□ -2.43
APOA1P02647 MIR4804-201ENST00000581683 73 ntBASIC-0.12□□□□□ -2.43
APOA1P02647 MIR548AR-201ENST00000582191 57 ntBASIC-0.12□□□□□ -2.43
APOA1P02647 uc_338.16-201ENST00000621804 95 ntBASIC-0.12□□□□□ -2.43
APOA1P02647 RNA5SP214-201ENST00000363378 118 ntBASIC-0.13□□□□□ -2.43
APOA1P02647 SNORA42.1-201ENST00000363515 137 ntBASIC-0.13□□□□□ -2.43
APOA1P02647 SNORD114-9-201ENST00000364370 72 ntBASIC-0.13□□□□□ -2.43
APOA1P02647 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.13□□□□□ -2.43
APOA1P02647 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.13□□□□□ -2.43
APOA1P02647 MIR329-1-201ENST00000385028 80 ntBASIC-0.13□□□□□ -2.43
APOA1P02647 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
APOA1P02647 RNU2-54P-201ENST00000410299 190 ntBASIC-0.13□□□□□ -2.43
APOA1P02647 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC-0.13□□□□□ -2.43
APOA1P02647 NDUFA5P4-201ENST00000436704 385 ntBASIC-0.13□□□□□ -2.43
APOA1P02647 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.13□□□□□ -2.43
APOA1P02647 Y_RNA.706-201ENST00000516933 99 ntBASIC-0.13□□□□□ -2.43
APOA1P02647 AC125232.2-201ENST00000592457 143 ntBASIC-0.13□□□□□ -2.43
APOA1P02647 AC124303.1-201ENST00000605703 360 ntBASIC-0.13□□□□□ -2.43
APOA1P02647 AC007742.2-201ENST00000618226 398 ntBASIC-0.13□□□□□ -2.43
APOA1P02647 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.13□□□□□ -2.43
APOA1P02647 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.14□□□□□ -2.43
APOA1P02647 SNORD114-7-201ENST00000362520 77 ntBASIC-0.14□□□□□ -2.43
APOA1P02647 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.14□□□□□ -2.43
APOA1P02647 SNORD118-201ENST00000363593 134 ntBASIC-0.14□□□□□ -2.43
APOA1P02647 RNU6-454P-201ENST00000364292 107 ntBASIC-0.14□□□□□ -2.43
APOA1P02647 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.14□□□□□ -2.43
APOA1P02647 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.14□□□□□ -2.43
APOA1P02647 MIR499A-201ENST00000384903 122 ntBASIC-0.14□□□□□ -2.43
APOA1P02647 DLGAP5P1-201ENST00000430307 464 ntBASIC-0.14□□□□□ -2.43
APOA1P02647 RN7SKP287-201ENST00000516546 266 ntBASIC-0.14□□□□□ -2.43
APOA1P02647 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.14□□□□□ -2.43
APOA1P02647 AC018448.1-201ENST00000552843 316 ntBASIC-0.14□□□□□ -2.43
APOA1P02647 AC112693.2-201ENST00000556538 232 ntBASIC-0.14□□□□□ -2.43
APOA1P02647 SNORA4-201ENST00000584302 138 ntBASIC-0.14□□□□□ -2.43
APOA1P02647 RNU6-89P-201ENST00000606519 100 ntBASIC-0.14□□□□□ -2.43
APOA1P02647 MIR377-201ENST00000362145 69 ntBASIC-0.15□□□□□ -2.43
APOA1P02647 MIR410-201ENST00000362222 80 ntBASIC-0.15□□□□□ -2.43
APOA1P02647 Y_RNA.164-201ENST00000363709 102 ntBASIC-0.15□□□□□ -2.43
APOA1P02647 RNU6-580P-201ENST00000365159 107 ntBASIC-0.15□□□□□ -2.43
APOA1P02647 Y_RNA.372-201ENST00000365599 102 ntBASIC-0.15□□□□□ -2.43
APOA1P02647 MTATP6P19-201ENST00000413797 659 ntBASIC-0.15□□□□□ -2.43
APOA1P02647 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.15□□□□□ -2.43
APOA1P02647 RNU6-863P-201ENST00000515989 104 ntBASIC-0.15□□□□□ -2.43
APOA1P02647 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.15□□□□□ -2.43
APOA1P02647 ZNF519P2-201ENST00000557032 169 ntBASIC-0.15□□□□□ -2.43
APOA1P02647 MIR4273-201ENST00000582824 84 ntBASIC-0.15□□□□□ -2.43
APOA1P02647 AC023932.2-201ENST00000603176 175 ntBASIC-0.15□□□□□ -2.43
APOA1P02647 Z69908.1-201ENST00000622603 247 ntBASIC-0.15□□□□□ -2.43
APOA1P02647 AC010487.4-201ENST00000637027 61 ntBASIC-0.15□□□□□ -2.43
APOA1P02647 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.15□□□□□ -2.43
APOA1P02647 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.16□□□□□ -2.44
APOA1P02647 SNORD45.3-201ENST00000363836 72 ntBASIC-0.16□□□□□ -2.44
APOA1P02647 MIR570-201ENST00000384917 97 ntBASIC-0.16□□□□□ -2.44
APOA1P02647 MT-TN-201ENST00000387400 73 ntBASIC-0.16□□□□□ -2.44
APOA1P02647 RNU6-205P-201ENST00000390858 107 ntBASIC-0.16□□□□□ -2.44
APOA1P02647 RNU6-648P-201ENST00000410190 107 ntBASIC-0.16□□□□□ -2.44
APOA1P02647 RNA5SP475-201ENST00000410568 110 ntBASIC-0.16□□□□□ -2.44
APOA1P02647 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.16□□□□□ -2.44
APOA1P02647 RNU6-329P-201ENST00000459618 107 ntBASIC-0.16□□□□□ -2.44
APOA1P02647 AC010486.3-201ENST00000511602 785 ntBASIC-0.16□□□□□ -2.44
APOA1P02647 RNA5SP227-201ENST00000516184 113 ntBASIC-0.16□□□□□ -2.44
APOA1P02647 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-0.16□□□□□ -2.44
APOA1P02647 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.16□□□□□ -2.44
APOA1P02647 MIR4676-201ENST00000583078 72 ntBASIC-0.16□□□□□ -2.44
APOA1P02647 AP000753.3-201ENST00000604083 169 ntBASIC-0.16□□□□□ -2.44
APOA1P02647 MIR3674-201ENST00000636576 68 ntBASIC-0.16□□□□□ -2.44
APOA1P02647 ZNF299P-201ENST00000406845 1804 ntBASIC-0.17□□□□□ -2.44
APOA1P02647 SNORD50B-201ENST00000364995 70 ntBASIC-0.17□□□□□ -2.44
APOA1P02647 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.17□□□□□ -2.44
APOA1P02647 SNORA8.2-201ENST00000384372 139 ntBASIC-0.17□□□□□ -2.44
APOA1P02647 RNU6-131P-201ENST00000391144 107 ntBASIC-0.17□□□□□ -2.44
APOA1P02647 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.17□□□□□ -2.44
APOA1P02647 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.17□□□□□ -2.44
APOA1P02647 RNU6-625P-201ENST00000459412 107 ntBASIC-0.17□□□□□ -2.44
APOA1P02647 MTND3P7-201ENST00000474435 343 ntBASIC-0.17□□□□□ -2.44
APOA1P02647 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.17□□□□□ -2.44
APOA1P02647 RNU6-835P-201ENST00000516974 104 ntBASIC-0.17□□□□□ -2.44
APOA1P02647 MIR6718-201ENST00000616153 80 ntBASIC-0.17□□□□□ -2.44
APOA1P02647 IST1-227ENST00000626438 126 ntTSL 5 BASIC-0.17□□□□□ -2.44
APOA1P02647 AC027514.1-201ENST00000588561 1603 ntBASIC-0.17□□□□□ -2.44
APOA1P02647 RNU6-595P-201ENST00000363944 107 ntBASIC-0.18□□□□□ -2.44
APOA1P02647 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.18□□□□□ -2.44
APOA1P02647 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.18□□□□□ -2.44
APOA1P02647 Y_RNA.373-201ENST00000365600 103 ntBASIC-0.18□□□□□ -2.44
APOA1P02647 AC092447.3-201ENST00000426027 686 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms