Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC091133.4-201ENST00000511142 308 ntBASIC-0.8□□□□□ -2.54
TNFP01375 RNA5SP216-201ENST00000516111 123 ntBASIC-0.8□□□□□ -2.54
TNFP01375 SNORA18.4-201ENST00000516440 124 ntBASIC-0.8□□□□□ -2.54
TNFP01375 RNU7-172P-201ENST00000517125 64 ntBASIC-0.8□□□□□ -2.54
TNFP01375 RNU7-156P-201ENST00000517214 74 ntBASIC-0.8□□□□□ -2.54
TNFP01375 RNY1P9-201ENST00000532431 109 ntBASIC-0.8□□□□□ -2.54
TNFP01375 HIF1AP1-201ENST00000553642 175 ntBASIC-0.8□□□□□ -2.54
TNFP01375 AC138749.4-201ENST00000563970 127 ntBASIC-0.8□□□□□ -2.54
TNFP01375 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.8□□□□□ -2.54
TNFP01375 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-0.8□□□□□ -2.54
TNFP01375 AC244669.1-204ENST00000621564 178 ntBASIC-0.8□□□□□ -2.54
TNFP01375 AC010608.3-201ENST00000625048 527 ntBASIC-0.8□□□□□ -2.54
TNFP01375 RNU6-433P-201ENST00000363216 104 ntBASIC-0.81□□□□□ -2.54
TNFP01375 RNA5SP192-201ENST00000364404 120 ntBASIC-0.81□□□□□ -2.54
TNFP01375 RNU6-726P-201ENST00000364680 107 ntBASIC-0.81□□□□□ -2.54
TNFP01375 RNU6-740P-201ENST00000364734 105 ntBASIC-0.81□□□□□ -2.54
TNFP01375 RNU4-28P-201ENST00000364739 141 ntBASIC-0.81□□□□□ -2.54
TNFP01375 RNU6-224P-201ENST00000384055 107 ntBASIC-0.81□□□□□ -2.54
TNFP01375 RNU6-364P-201ENST00000384387 107 ntBASIC-0.81□□□□□ -2.54
TNFP01375 MIR15B-201ENST00000385045 98 ntBASIC-0.81□□□□□ -2.54
TNFP01375 SNORA75.1-201ENST00000391130 148 ntBASIC-0.81□□□□□ -2.54
TNFP01375 AL390729.2-201ENST00000416137 156 ntBASIC-0.81□□□□□ -2.54
TNFP01375 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-0.81□□□□□ -2.54
TNFP01375 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.81□□□□□ -2.54
TNFP01375 AL359672.1-201ENST00000442302 409 ntBASIC-0.81□□□□□ -2.54
TNFP01375 EPS15P1-201ENST00000448836 336 ntBASIC-0.81□□□□□ -2.54
TNFP01375 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.81□□□□□ -2.54
TNFP01375 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.81□□□□□ -2.54
TNFP01375 RNU6-175P-201ENST00000516896 107 ntBASIC-0.81□□□□□ -2.54
TNFP01375 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-0.81□□□□□ -2.54
TNFP01375 MIR548AX-201ENST00000580117 73 ntBASIC-0.81□□□□□ -2.54
TNFP01375 MIR548AR-201ENST00000582191 57 ntBASIC-0.81□□□□□ -2.54
TNFP01375 MIR4306-201ENST00000583390 91 ntBASIC-0.81□□□□□ -2.54
TNFP01375 AC121334.2-201ENST00000605387 271 ntBASIC-0.81□□□□□ -2.54
TNFP01375 AC131235.4-201ENST00000609288 620 ntBASIC-0.81□□□□□ -2.54
TNFP01375 AC006441.5-201ENST00000612680 209 ntBASIC-0.81□□□□□ -2.54
TNFP01375 MIR4320-201ENST00000636981 65 ntBASIC-0.81□□□□□ -2.54
TNFP01375 MIR382-201ENST00000637119 76 ntBASIC-0.81□□□□□ -2.54
TNFP01375 MTND4P9-201ENST00000507819 1346 ntBASIC-0.82□□□□□ -2.54
TNFP01375 RNY4P24-201ENST00000362735 96 ntBASIC-0.82□□□□□ -2.54
TNFP01375 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.82□□□□□ -2.54
TNFP01375 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.82□□□□□ -2.54
TNFP01375 SNORD87-201ENST00000364849 89 ntBASIC-0.82□□□□□ -2.54
TNFP01375 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.82□□□□□ -2.54
TNFP01375 MIR8485-201ENST00000401372 91 ntBASIC-0.82□□□□□ -2.54
TNFP01375 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-0.82□□□□□ -2.54
TNFP01375 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.82□□□□□ -2.54
TNFP01375 AL031274.1-201ENST00000450334 232 ntBASIC-0.82□□□□□ -2.54
TNFP01375 RNU7-185P-201ENST00000459215 60 ntBASIC-0.82□□□□□ -2.54
TNFP01375 RNU6-274P-201ENST00000459566 107 ntBASIC-0.82□□□□□ -2.54
TNFP01375 MTCO2P6-201ENST00000463134 685 ntBASIC-0.82□□□□□ -2.54
TNFP01375 HSPE1P23-201ENST00000509838 286 ntBASIC-0.82□□□□□ -2.54
TNFP01375 RNU6-201P-201ENST00000517100 61 ntBASIC-0.82□□□□□ -2.54
TNFP01375 AC093023.1-201ENST00000547375 507 ntBASIC-0.82□□□□□ -2.54
TNFP01375 AL157687.1-201ENST00000554853 619 ntBASIC-0.82□□□□□ -2.54
TNFP01375 MIR4264-201ENST00000583520 66 ntBASIC-0.82□□□□□ -2.54
TNFP01375 AC069431.2-201ENST00000604149 1099 ntBASIC-0.82□□□□□ -2.54
TNFP01375 AF250324.2-201ENST00000608299 610 ntBASIC-0.82□□□□□ -2.54
TNFP01375 AC091304.9-201ENST00000612091 226 ntBASIC-0.82□□□□□ -2.54
TNFP01375 AC006435.5-201ENST00000624486 112 ntBASIC-0.82□□□□□ -2.54
TNFP01375 AC005609.4-201ENST00000625071 447 ntBASIC-0.82□□□□□ -2.54
TNFP01375 AC091948.2-201ENST00000636510 279 ntBASIC-0.82□□□□□ -2.54
TNFP01375 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.83□□□□□ -2.54
TNFP01375 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.83□□□□□ -2.54
TNFP01375 Y_RNA.167-201ENST00000363735 109 ntBASIC-0.83□□□□□ -2.54
TNFP01375 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.83□□□□□ -2.54
TNFP01375 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.83□□□□□ -2.54
TNFP01375 MIR487A-201ENST00000385009 80 ntBASIC-0.83□□□□□ -2.54
TNFP01375 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.83□□□□□ -2.54
TNFP01375 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.83□□□□□ -2.54
TNFP01375 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.83□□□□□ -2.54
TNFP01375 BX276092.1-201ENST00000427368 251 ntBASIC-0.83□□□□□ -2.54
TNFP01375 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.83□□□□□ -2.54
TNFP01375 AL445193.1-201ENST00000441183 141 ntBASIC-0.83□□□□□ -2.54
TNFP01375 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-0.83□□□□□ -2.54
TNFP01375 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-0.83□□□□□ -2.54
TNFP01375 MTND1P5-201ENST00000517906 940 ntBASIC-0.83□□□□□ -2.54
TNFP01375 AL358944.1-201ENST00000528537 144 ntBASIC-0.83□□□□□ -2.54
TNFP01375 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-0.83□□□□□ -2.54
TNFP01375 MIR378D2-201ENST00000580636 98 ntBASIC-0.83□□□□□ -2.54
TNFP01375 AC145423.2-201ENST00000610631 239 ntBASIC-0.83□□□□□ -2.54
TNFP01375 MIR6851-201ENST00000617060 67 ntBASIC-0.83□□□□□ -2.54
TNFP01375 AC105081.1-201ENST00000617727 106 ntBASIC-0.83□□□□□ -2.54
TNFP01375 AC019226.2-201ENST00000625973 424 ntBASIC-0.83□□□□□ -2.54
TNFP01375 AC093726.3-201ENST00000637588 150 ntBASIC-0.83□□□□□ -2.54
TNFP01375 AC010332.2-201ENST00000613083 1904 ntBASIC-0.83□□□□□ -2.54
TNFP01375 Y_RNA.22-201ENST00000362492 102 ntBASIC-0.84□□□□□ -2.54
TNFP01375 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.84□□□□□ -2.54
TNFP01375 RNU6-490P-201ENST00000362985 107 ntBASIC-0.84□□□□□ -2.54
TNFP01375 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.84□□□□□ -2.54
TNFP01375 RNU4-1-201ENST00000363925 141 ntBASIC-0.84□□□□□ -2.54
TNFP01375 RNA5SP245-201ENST00000364239 121 ntBASIC-0.84□□□□□ -2.54
TNFP01375 SNORA22B-201ENST00000383876 138 ntBASIC-0.84□□□□□ -2.54
TNFP01375 RNU6-455P-201ENST00000384681 107 ntBASIC-0.84□□□□□ -2.54
TNFP01375 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.84□□□□□ -2.54
TNFP01375 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.84□□□□□ -2.54
TNFP01375 AC040926.1-201ENST00000530195 238 ntBASIC-0.84□□□□□ -2.54
TNFP01375 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.84□□□□□ -2.54
TNFP01375 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.84□□□□□ -2.54
TNFP01375 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.84□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms