Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AF235103.2-201ENST00000525753 346 ntBASIC0.38□□□□□ -2.35
UPK1BO75841 AC018659.1-201ENST00000551083 169 ntBASIC0.38□□□□□ -2.35
UPK1BO75841 AC133485.1-201ENST00000567176 124 ntBASIC0.38□□□□□ -2.35
UPK1BO75841 AC138907.6-201ENST00000568401 126 ntBASIC0.38□□□□□ -2.35
UPK1BO75841 Y_RNA.41-201ENST00000362646 102 ntBASIC0.37□□□□□ -2.35
UPK1BO75841 RNY1P10-201ENST00000363268 113 ntBASIC0.37□□□□□ -2.35
UPK1BO75841 U8.5-201ENST00000364528 136 ntBASIC0.37□□□□□ -2.35
UPK1BO75841 RNU6-1237P-201ENST00000384777 107 ntBASIC0.37□□□□□ -2.35
UPK1BO75841 RNU6-700P-201ENST00000391043 107 ntBASIC0.37□□□□□ -2.35
UPK1BO75841 RNU6-373P-201ENST00000411247 98 ntBASIC0.37□□□□□ -2.35
UPK1BO75841 RNU6-1304P-201ENST00000411374 106 ntBASIC0.37□□□□□ -2.35
UPK1BO75841 AC244023.1-201ENST00000426884 112 ntBASIC0.37□□□□□ -2.35
UPK1BO75841 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.37□□□□□ -2.35
UPK1BO75841 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.37□□□□□ -2.35
UPK1BO75841 SNORA25.10-201ENST00000515926 124 ntBASIC0.37□□□□□ -2.35
UPK1BO75841 RNU6-506P-201ENST00000516553 94 ntBASIC0.37□□□□□ -2.35
UPK1BO75841 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.37□□□□□ -2.35
UPK1BO75841 MIR4790-201ENST00000577799 79 ntBASIC0.37□□□□□ -2.35
UPK1BO75841 MIR4762-201ENST00000585261 75 ntBASIC0.37□□□□□ -2.35
UPK1BO75841 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.37□□□□□ -2.35
UPK1BO75841 AC242498.1-201ENST00000604134 111 ntBASIC0.37□□□□□ -2.35
UPK1BO75841 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.37□□□□□ -2.35
UPK1BO75841 AC243994.1-201ENST00000618627 109 ntBASIC0.37□□□□□ -2.35
UPK1BO75841 AC134026.1-201ENST00000623249 2239 ntBASIC0.36□□□□□ -2.35
UPK1BO75841 MIR96-201ENST00000362288 78 ntBASIC0.36□□□□□ -2.35
UPK1BO75841 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
UPK1BO75841 AC117470.1-201ENST00000381974 330 ntBASIC0.36□□□□□ -2.35
UPK1BO75841 RNU6-1013P-201ENST00000384180 107 ntBASIC0.36□□□□□ -2.35
UPK1BO75841 RNU6-1067P-201ENST00000384752 107 ntBASIC0.36□□□□□ -2.35
UPK1BO75841 RNA5SP95-201ENST00000410319 137 ntBASIC0.36□□□□□ -2.35
UPK1BO75841 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.36□□□□□ -2.35
UPK1BO75841 SNORD123-201ENST00000459473 70 ntBASIC0.36□□□□□ -2.35
UPK1BO75841 RNA5SP102-201ENST00000516865 106 ntBASIC0.36□□□□□ -2.35
UPK1BO75841 AC105029.1-201ENST00000520250 669 ntBASIC0.36□□□□□ -2.35
UPK1BO75841 AC109635.3-201ENST00000529536 185 ntBASIC0.36□□□□□ -2.35
UPK1BO75841 AC011604.1-201ENST00000545978 196 ntBASIC0.36□□□□□ -2.35
UPK1BO75841 AC103591.3-201ENST00000608684 209 ntBASIC0.36□□□□□ -2.35
UPK1BO75841 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.36□□□□□ -2.35
UPK1BO75841 Y_RNA.2-201ENST00000362330 96 ntBASIC0.35□□□□□ -2.35
UPK1BO75841 RNU6-1084P-201ENST00000362498 107 ntBASIC0.35□□□□□ -2.35
UPK1BO75841 RNA5SP48-201ENST00000363969 126 ntBASIC0.35□□□□□ -2.35
UPK1BO75841 RNU1-93P-201ENST00000364704 169 ntBASIC0.35□□□□□ -2.35
UPK1BO75841 Y_RNA.559-201ENST00000384686 107 ntBASIC0.35□□□□□ -2.35
UPK1BO75841 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
UPK1BO75841 SNORD111-201ENST00000408139 94 ntBASIC0.35□□□□□ -2.35
UPK1BO75841 UBE2V1P7-201ENST00000446395 340 ntBASIC0.35□□□□□ -2.35
UPK1BO75841 MTND1P29-201ENST00000448112 647 ntBASIC0.35□□□□□ -2.35
UPK1BO75841 SUMO1P2-201ENST00000452524 304 ntBASIC0.35□□□□□ -2.35
UPK1BO75841 SNORD45.4-201ENST00000516629 73 ntBASIC0.35□□□□□ -2.35
UPK1BO75841 AC093027.1-201ENST00000546698 429 ntBASIC0.35□□□□□ -2.35
UPK1BO75841 AC245505.1-201ENST00000556398 224 ntBASIC0.35□□□□□ -2.35
UPK1BO75841 CYP3A137P-201ENST00000562436 69 ntBASIC0.35□□□□□ -2.35
UPK1BO75841 MIR4300-201ENST00000581016 96 ntBASIC0.35□□□□□ -2.35
UPK1BO75841 Z83818.1-201ENST00000603584 150 ntBASIC0.35□□□□□ -2.35
UPK1BO75841 AC018462.2-201ENST00000605375 395 ntBASIC0.35□□□□□ -2.35
UPK1BO75841 AL136317.1-201ENST00000612653 226 ntBASIC0.35□□□□□ -2.35
UPK1BO75841 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.35□□□□□ -2.35
UPK1BO75841 MIR6516-201ENST00000630554 81 ntBASIC0.35□□□□□ -2.35
UPK1BO75841 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.34□□□□□ -2.35
UPK1BO75841 SNORD114-7-201ENST00000362520 77 ntBASIC0.34□□□□□ -2.36
UPK1BO75841 Y_RNA.172-201ENST00000363765 102 ntBASIC0.34□□□□□ -2.36
UPK1BO75841 SNORD115-30-201ENST00000364117 82 ntBASIC0.34□□□□□ -2.36
UPK1BO75841 Y_RNA.253-201ENST00000364562 112 ntBASIC0.34□□□□□ -2.36
UPK1BO75841 Y_RNA.301-201ENST00000364990 103 ntBASIC0.34□□□□□ -2.36
UPK1BO75841 SNORA50A-201ENST00000384225 134 ntBASIC0.34□□□□□ -2.36
UPK1BO75841 MIR522-201ENST00000385071 87 ntBASIC0.34□□□□□ -2.36
UPK1BO75841 SNORD105-201ENST00000386910 85 ntBASIC0.34□□□□□ -2.36
UPK1BO75841 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.34□□□□□ -2.36
UPK1BO75841 MIR1302-7-201ENST00000408841 72 ntBASIC0.34□□□□□ -2.36
UPK1BO75841 SNORD12B-201ENST00000410433 91 ntBASIC0.34□□□□□ -2.36
UPK1BO75841 MTCO2P12-201ENST00000427426 682 ntBASIC0.34□□□□□ -2.36
UPK1BO75841 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.34□□□□□ -2.36
UPK1BO75841 AC026782.1-201ENST00000512952 449 ntBASIC0.34□□□□□ -2.36
UPK1BO75841 RNU6-1053P-201ENST00000515930 101 ntBASIC0.34□□□□□ -2.36
UPK1BO75841 Y_RNA.682-201ENST00000516457 100 ntBASIC0.34□□□□□ -2.36
UPK1BO75841 RNU7-43P-201ENST00000516554 64 ntBASIC0.34□□□□□ -2.36
UPK1BO75841 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.34□□□□□ -2.36
UPK1BO75841 AC012433.1-201ENST00000588916 398 ntBASIC0.34□□□□□ -2.36
UPK1BO75841 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.34□□□□□ -2.36
UPK1BO75841 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.33□□□□□ -2.36
UPK1BO75841 SNORD113.3-201ENST00000364630 78 ntBASIC0.33□□□□□ -2.36
UPK1BO75841 Y_RNA.402-201ENST00000383972 102 ntBASIC0.33□□□□□ -2.36
UPK1BO75841 RNU6-1310P-201ENST00000384153 107 ntBASIC0.33□□□□□ -2.36
UPK1BO75841 Y_RNA.517-201ENST00000384551 106 ntBASIC0.33□□□□□ -2.36
UPK1BO75841 SNORA2B-201ENST00000384583 137 ntBASIC0.33□□□□□ -2.36
UPK1BO75841 MIR1827-201ENST00000408549 66 ntBASIC0.33□□□□□ -2.36
UPK1BO75841 Y_RNA.594-201ENST00000410373 140 ntBASIC0.33□□□□□ -2.36
UPK1BO75841 AC074085.1-201ENST00000413598 418 ntBASIC0.33□□□□□ -2.36
UPK1BO75841 AC009161.1-201ENST00000417306 376 ntBASIC0.33□□□□□ -2.36
UPK1BO75841 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.33□□□□□ -2.36
UPK1BO75841 RNU6-408P-201ENST00000515910 100 ntBASIC0.33□□□□□ -2.36
UPK1BO75841 RNU2-12P-201ENST00000517216 168 ntBASIC0.33□□□□□ -2.36
UPK1BO75841 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.33□□□□□ -2.36
UPK1BO75841 AC055872.1-201ENST00000570978 278 ntBASIC0.33□□□□□ -2.36
UPK1BO75841 AC004467.1-201ENST00000615678 330 ntBASIC0.33□□□□□ -2.36
UPK1BO75841 AL359757.2-201ENST00000624309 274 ntBASIC0.33□□□□□ -2.36
UPK1BO75841 MIR337-201ENST00000362281 93 ntBASIC0.32□□□□□ -2.36
UPK1BO75841 RNU4-75P-201ENST00000364621 146 ntBASIC0.32□□□□□ -2.36
UPK1BO75841 SNORD50B-201ENST00000364995 70 ntBASIC0.32□□□□□ -2.36
UPK1BO75841 Y_RNA.338-201ENST00000365320 114 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 198.6 ms