Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AP003357.1-201ENST00000604497 148 ntBASIC2.34□□□□□ -2.03
VPS4BO75351 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.34□□□□□ -2.03
VPS4BO75351 MIR6895-201ENST00000613497 78 ntBASIC2.34□□□□□ -2.03
VPS4BO75351 AC022202.1-201ENST00000613515 211 ntBASIC2.34□□□□□ -2.03
VPS4BO75351 FTX_2.1-201ENST00000618816 94 ntBASIC2.34□□□□□ -2.03
VPS4BO75351 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
VPS4BO75351 AC016717.2-201ENST00000609089 5141 ntBASIC2.34□□□□□ -2.04
VPS4BO75351 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.34□□□□□ -2.04
VPS4BO75351 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VPS4BO75351 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
VPS4BO75351 RNU1-91P-201ENST00000364746 163 ntBASIC2.33□□□□□ -2.04
VPS4BO75351 RNU6-918P-201ENST00000391219 106 ntBASIC2.33□□□□□ -2.04
VPS4BO75351 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.33□□□□□ -2.04
VPS4BO75351 MIR1289-2-201ENST00000408360 111 ntBASIC2.33□□□□□ -2.04
VPS4BO75351 RN7SKP223-201ENST00000410582 62 ntBASIC2.33□□□□□ -2.04
VPS4BO75351 RNU7-120P-201ENST00000459334 63 ntBASIC2.33□□□□□ -2.04
VPS4BO75351 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS4BO75351 AC027419.1-201ENST00000522976 328 ntBASIC2.33□□□□□ -2.04
VPS4BO75351 AC100767.1-201ENST00000528178 123 ntBASIC2.33□□□□□ -2.04
VPS4BO75351 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS4BO75351 AC015720.1-201ENST00000565251 277 ntBASIC2.33□□□□□ -2.04
VPS4BO75351 MIR5688-201ENST00000580619 83 ntBASIC2.33□□□□□ -2.04
VPS4BO75351 AC005972.2-201ENST00000604690 348 ntBASIC2.33□□□□□ -2.04
VPS4BO75351 U6.108-201ENST00000637764 58 ntBASIC2.33□□□□□ -2.04
VPS4BO75351 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.32□□□□□ -2.04
VPS4BO75351 U8.7-201ENST00000364940 136 ntBASIC2.32□□□□□ -2.04
VPS4BO75351 RNU6-144P-201ENST00000383951 107 ntBASIC2.32□□□□□ -2.04
VPS4BO75351 MIR1253-201ENST00000408273 105 ntBASIC2.32□□□□□ -2.04
VPS4BO75351 MTND5P15-201ENST00000434246 349 ntBASIC2.32□□□□□ -2.04
VPS4BO75351 ATP5J2P3-201ENST00000451550 258 ntBASIC2.32□□□□□ -2.04
VPS4BO75351 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.32□□□□□ -2.04
VPS4BO75351 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.32□□□□□ -2.04
VPS4BO75351 RNU6-1041P-201ENST00000516254 102 ntBASIC2.32□□□□□ -2.04
VPS4BO75351 RNA5SP320-201ENST00000516263 124 ntBASIC2.32□□□□□ -2.04
VPS4BO75351 SNORA31.11-201ENST00000516528 139 ntBASIC2.32□□□□□ -2.04
VPS4BO75351 MIR3126-201ENST00000577443 74 ntBASIC2.32□□□□□ -2.04
VPS4BO75351 AC022513.1-201ENST00000624512 117 ntBASIC2.32□□□□□ -2.04
VPS4BO75351 MIR203B-201ENST00000636080 86 ntBASIC2.32□□□□□ -2.04
VPS4BO75351 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VPS4BO75351 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
VPS4BO75351 MIRLET7G-201ENST00000362280 84 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 RNU1-58P-201ENST00000362413 163 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 Y_RNA.238-201ENST00000364441 102 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 Y_RNA.555-201ENST00000384673 110 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 RNU6-417P-201ENST00000384712 107 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 MTCO2P33-201ENST00000402100 465 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 AL359511.1-201ENST00000402970 211 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 RNA5SP511-201ENST00000410487 115 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 RNA5SP247-201ENST00000411181 105 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 EBAG9P1-201ENST00000418955 543 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
VPS4BO75351 RNU6-1278P-201ENST00000516130 107 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 RNA5SP458-201ENST00000516188 119 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 RNU7-99P-201ENST00000516271 62 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 RNU6-63P-201ENST00000516690 95 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 RNU7-116P-201ENST00000516940 62 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 RNU7-172P-201ENST00000517125 64 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.31□□□□□ -2.04
VPS4BO75351 AC024405.2-202ENST00000532731 184 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 MIR4308-201ENST00000580634 81 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 AC245884.12-201ENST00000615364 59 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 MIR548AY-201ENST00000617669 107 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 AL353997.5-201ENST00000618886 171 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 MIR1291-201ENST00000627649 87 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 AC134026.1-201ENST00000623249 2239 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.3□□□□□ -2.04
VPS4BO75351 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VPS4BO75351 RNA5SP99-201ENST00000364020 114 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 RNU1-51P-201ENST00000365345 176 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 RNU6-47P-201ENST00000383866 107 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 MIR626-201ENST00000385032 94 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 MIR526A2-201ENST00000390198 65 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 MIR764-201ENST00000390811 85 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 SNORA40.19-201ENST00000390846 128 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 Y_RNA.793-201ENST00000411222 111 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 PIGPP3-201ENST00000425307 415 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 CST2P1-201ENST00000425770 87 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 HMGN2P3-201ENST00000433603 273 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 HMGN2P5-201ENST00000436882 273 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.3□□□□□ -2.04
VPS4BO75351 AC010409.1-201ENST00000487382 476 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 IGLV3-17-201ENST00000519099 244 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 AC121758.2-201ENST00000553271 193 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 AC127455.1-201ENST00000565496 145 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 AC007229.1-201ENST00000590455 412 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 AC068647.2-201ENST00000637380 353 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS4BO75351 RNU6-1020P-201ENST00000363684 107 ntBASIC2.29□□□□□ -2.04
VPS4BO75351 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.29□□□□□ -2.04
VPS4BO75351 MIR518C-201ENST00000384822 101 ntBASIC2.29□□□□□ -2.04
VPS4BO75351 MIR515-2-201ENST00000384883 83 ntBASIC2.29□□□□□ -2.04
VPS4BO75351 MIR515-1-201ENST00000384884 83 ntBASIC2.29□□□□□ -2.04
VPS4BO75351 MIR1283-2-201ENST00000408621 87 ntBASIC2.29□□□□□ -2.04
VPS4BO75351 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.29□□□□□ -2.04
VPS4BO75351 AC099677.2-201ENST00000436385 175 ntBASIC2.29□□□□□ -2.04
VPS4BO75351 AC018634.1-201ENST00000437554 401 ntBASIC2.29□□□□□ -2.04
VPS4BO75351 AL603825.1-201ENST00000438481 80 ntBASIC2.29□□□□□ -2.04
VPS4BO75351 RPS26P45-201ENST00000471748 340 ntBASIC2.29□□□□□ -2.04
VPS4BO75351 RNY3P16-201ENST00000516338 101 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 265.9 ms