Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AP003357.1-201ENST00000604497 148 ntBASIC2.34□□□□□ -2.03
VPS4BO75351 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.34□□□□□ -2.03
VPS4BO75351 MIR6895-201ENST00000613497 78 ntBASIC2.34□□□□□ -2.03
VPS4BO75351 AC022202.1-201ENST00000613515 211 ntBASIC2.34□□□□□ -2.03
VPS4BO75351 FTX_2.1-201ENST00000618816 94 ntBASIC2.34□□□□□ -2.03
VPS4BO75351 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
VPS4BO75351 AC016717.2-201ENST00000609089 5141 ntBASIC2.34□□□□□ -2.04
VPS4BO75351 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.34□□□□□ -2.04
VPS4BO75351 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VPS4BO75351 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
VPS4BO75351 RNU1-91P-201ENST00000364746 163 ntBASIC2.33□□□□□ -2.04
VPS4BO75351 RNU6-918P-201ENST00000391219 106 ntBASIC2.33□□□□□ -2.04
VPS4BO75351 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.33□□□□□ -2.04
VPS4BO75351 MIR1289-2-201ENST00000408360 111 ntBASIC2.33□□□□□ -2.04
VPS4BO75351 RN7SKP223-201ENST00000410582 62 ntBASIC2.33□□□□□ -2.04
VPS4BO75351 RNU7-120P-201ENST00000459334 63 ntBASIC2.33□□□□□ -2.04
VPS4BO75351 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS4BO75351 AC027419.1-201ENST00000522976 328 ntBASIC2.33□□□□□ -2.04
VPS4BO75351 AC100767.1-201ENST00000528178 123 ntBASIC2.33□□□□□ -2.04
VPS4BO75351 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS4BO75351 AC015720.1-201ENST00000565251 277 ntBASIC2.33□□□□□ -2.04
VPS4BO75351 MIR5688-201ENST00000580619 83 ntBASIC2.33□□□□□ -2.04
VPS4BO75351 AC005972.2-201ENST00000604690 348 ntBASIC2.33□□□□□ -2.04
VPS4BO75351 U6.108-201ENST00000637764 58 ntBASIC2.33□□□□□ -2.04
VPS4BO75351 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.32□□□□□ -2.04
VPS4BO75351 U8.7-201ENST00000364940 136 ntBASIC2.32□□□□□ -2.04
VPS4BO75351 RNU6-144P-201ENST00000383951 107 ntBASIC2.32□□□□□ -2.04
VPS4BO75351 MIR1253-201ENST00000408273 105 ntBASIC2.32□□□□□ -2.04
VPS4BO75351 MTND5P15-201ENST00000434246 349 ntBASIC2.32□□□□□ -2.04
VPS4BO75351 ATP5J2P3-201ENST00000451550 258 ntBASIC2.32□□□□□ -2.04
VPS4BO75351 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.32□□□□□ -2.04
VPS4BO75351 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.32□□□□□ -2.04
VPS4BO75351 RNU6-1041P-201ENST00000516254 102 ntBASIC2.32□□□□□ -2.04
VPS4BO75351 RNA5SP320-201ENST00000516263 124 ntBASIC2.32□□□□□ -2.04
VPS4BO75351 SNORA31.11-201ENST00000516528 139 ntBASIC2.32□□□□□ -2.04
VPS4BO75351 MIR3126-201ENST00000577443 74 ntBASIC2.32□□□□□ -2.04
VPS4BO75351 AC022513.1-201ENST00000624512 117 ntBASIC2.32□□□□□ -2.04
VPS4BO75351 MIR203B-201ENST00000636080 86 ntBASIC2.32□□□□□ -2.04
VPS4BO75351 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VPS4BO75351 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
VPS4BO75351 MIRLET7G-201ENST00000362280 84 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 RNU1-58P-201ENST00000362413 163 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 Y_RNA.238-201ENST00000364441 102 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 Y_RNA.555-201ENST00000384673 110 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 RNU6-417P-201ENST00000384712 107 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 MTCO2P33-201ENST00000402100 465 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 AL359511.1-201ENST00000402970 211 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 RNA5SP511-201ENST00000410487 115 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 RNA5SP247-201ENST00000411181 105 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 EBAG9P1-201ENST00000418955 543 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
VPS4BO75351 RNU6-1278P-201ENST00000516130 107 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 RNA5SP458-201ENST00000516188 119 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 RNU7-99P-201ENST00000516271 62 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 RNU6-63P-201ENST00000516690 95 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 RNU7-116P-201ENST00000516940 62 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 RNU7-172P-201ENST00000517125 64 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.31□□□□□ -2.04
VPS4BO75351 AC024405.2-202ENST00000532731 184 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 MIR4308-201ENST00000580634 81 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 AC245884.12-201ENST00000615364 59 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 MIR548AY-201ENST00000617669 107 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 AL353997.5-201ENST00000618886 171 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 MIR1291-201ENST00000627649 87 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 AC134026.1-201ENST00000623249 2239 ntBASIC2.31□□□□□ -2.04
VPS4BO75351 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.3□□□□□ -2.04
VPS4BO75351 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VPS4BO75351 RNA5SP99-201ENST00000364020 114 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 RNU1-51P-201ENST00000365345 176 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 RNU6-47P-201ENST00000383866 107 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 MIR626-201ENST00000385032 94 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 MIR526A2-201ENST00000390198 65 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 MIR764-201ENST00000390811 85 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 SNORA40.19-201ENST00000390846 128 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 Y_RNA.793-201ENST00000411222 111 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 PIGPP3-201ENST00000425307 415 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 CST2P1-201ENST00000425770 87 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 HMGN2P3-201ENST00000433603 273 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 HMGN2P5-201ENST00000436882 273 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.3□□□□□ -2.04
VPS4BO75351 AC010409.1-201ENST00000487382 476 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 IGLV3-17-201ENST00000519099 244 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 AC121758.2-201ENST00000553271 193 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 AC127455.1-201ENST00000565496 145 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 AC007229.1-201ENST00000590455 412 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 AC068647.2-201ENST00000637380 353 ntBASIC2.3□□□□□ -2.04
VPS4BO75351 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS4BO75351 RNU6-1020P-201ENST00000363684 107 ntBASIC2.29□□□□□ -2.04
VPS4BO75351 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.29□□□□□ -2.04
VPS4BO75351 MIR518C-201ENST00000384822 101 ntBASIC2.29□□□□□ -2.04
VPS4BO75351 MIR515-2-201ENST00000384883 83 ntBASIC2.29□□□□□ -2.04
VPS4BO75351 MIR515-1-201ENST00000384884 83 ntBASIC2.29□□□□□ -2.04
VPS4BO75351 MIR1283-2-201ENST00000408621 87 ntBASIC2.29□□□□□ -2.04
VPS4BO75351 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.29□□□□□ -2.04
VPS4BO75351 AC099677.2-201ENST00000436385 175 ntBASIC2.29□□□□□ -2.04
VPS4BO75351 AC018634.1-201ENST00000437554 401 ntBASIC2.29□□□□□ -2.04
VPS4BO75351 AL603825.1-201ENST00000438481 80 ntBASIC2.29□□□□□ -2.04
VPS4BO75351 RPS26P45-201ENST00000471748 340 ntBASIC2.29□□□□□ -2.04
VPS4BO75351 RNY3P16-201ENST00000516338 101 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 159.4 ms