Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AC068137.4-201ENST00000638485 296 ntBASIC0.53□□□□□ -2.32
NPHP4O75161 RNU6-451P-201ENST00000362921 107 ntBASIC0.52□□□□□ -2.33
NPHP4O75161 SNORA25.3-201ENST00000363205 127 ntBASIC0.52□□□□□ -2.33
NPHP4O75161 Y_RNA.530-201ENST00000384587 101 ntBASIC0.52□□□□□ -2.33
NPHP4O75161 RNA5SP299-201ENST00000391203 116 ntBASIC0.52□□□□□ -2.33
NPHP4O75161 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.52□□□□□ -2.33
NPHP4O75161 USP9YP16-201ENST00000430287 407 ntBASIC0.52□□□□□ -2.33
NPHP4O75161 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.52□□□□□ -2.33
NPHP4O75161 USP9YP23-201ENST00000455085 407 ntBASIC0.52□□□□□ -2.33
NPHP4O75161 AL353765.1-201ENST00000605514 183 ntBASIC0.52□□□□□ -2.33
NPHP4O75161 AC104465.1-201ENST00000611365 139 ntBASIC0.52□□□□□ -2.33
NPHP4O75161 AC022079.1-201ENST00000621546 602 ntBASIC0.52□□□□□ -2.33
NPHP4O75161 MTND5P16-201ENST00000460269 1703 ntBASIC0.52□□□□□ -2.33
NPHP4O75161 CASC19-280ENST00000642102 1351 ntBASIC0.51□□□□□ -2.33
NPHP4O75161 RNU5F-3P-201ENST00000363767 117 ntBASIC0.51□□□□□ -2.33
NPHP4O75161 RNU6-595P-201ENST00000363944 107 ntBASIC0.51□□□□□ -2.33
NPHP4O75161 Y_RNA.414-201ENST00000384011 101 ntBASIC0.51□□□□□ -2.33
NPHP4O75161 MIR891A-201ENST00000401237 79 ntBASIC0.51□□□□□ -2.33
NPHP4O75161 MIR1912-201ENST00000410389 80 ntBASIC0.51□□□□□ -2.33
NPHP4O75161 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.51□□□□□ -2.33
NPHP4O75161 MTCO2P7-201ENST00000446518 666 ntBASIC0.51□□□□□ -2.33
NPHP4O75161 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.51□□□□□ -2.33
NPHP4O75161 PCNPP5-201ENST00000452246 481 ntBASIC0.51□□□□□ -2.33
NPHP4O75161 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.51□□□□□ -2.33
NPHP4O75161 RNU6-1114P-201ENST00000516022 107 ntBASIC0.51□□□□□ -2.33
NPHP4O75161 AC125232.2-201ENST00000592457 143 ntBASIC0.51□□□□□ -2.33
NPHP4O75161 AL627230.5-201ENST00000619807 58 ntBASIC0.51□□□□□ -2.33
NPHP4O75161 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
NPHP4O75161 RNA5SP264-201ENST00000363115 107 ntBASIC0.5□□□□□ -2.33
NPHP4O75161 RNU6-1090P-201ENST00000364065 94 ntBASIC0.5□□□□□ -2.33
NPHP4O75161 SNORD116-9-201ENST00000384000 95 ntBASIC0.5□□□□□ -2.33
NPHP4O75161 SNORD116-3-201ENST00000384287 95 ntBASIC0.5□□□□□ -2.33
NPHP4O75161 RNU6-163P-201ENST00000384396 106 ntBASIC0.5□□□□□ -2.33
NPHP4O75161 SNORD116-7-201ENST00000384404 95 ntBASIC0.5□□□□□ -2.33
NPHP4O75161 SNORD116-5-201ENST00000384462 95 ntBASIC0.5□□□□□ -2.33
NPHP4O75161 MIR329-1-201ENST00000385028 80 ntBASIC0.5□□□□□ -2.33
NPHP4O75161 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
NPHP4O75161 SNORD89-201ENST00000390981 114 ntBASIC0.5□□□□□ -2.33
NPHP4O75161 SNORD99-201ENST00000408612 74 ntBASIC0.5□□□□□ -2.33
NPHP4O75161 USP9YP30-201ENST00000430729 455 ntBASIC0.5□□□□□ -2.33
NPHP4O75161 AL162725.1-201ENST00000435405 301 ntBASIC0.5□□□□□ -2.33
NPHP4O75161 AL137792.2-201ENST00000443484 235 ntBASIC0.5□□□□□ -2.33
NPHP4O75161 UQCRBP2-201ENST00000447827 297 ntBASIC0.5□□□□□ -2.33
NPHP4O75161 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.5□□□□□ -2.33
NPHP4O75161 RNU4-77P-201ENST00000516692 156 ntBASIC0.5□□□□□ -2.33
NPHP4O75161 RNU6-1096P-201ENST00000517089 102 ntBASIC0.5□□□□□ -2.33
NPHP4O75161 AC023442.1-201ENST00000531247 422 ntBASIC0.5□□□□□ -2.33
NPHP4O75161 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.5□□□□□ -2.33
NPHP4O75161 AC024614.3-201ENST00000637860 256 ntBASIC0.5□□□□□ -2.33
NPHP4O75161 ZNF299P-201ENST00000406845 1804 ntBASIC0.5□□□□□ -2.33
NPHP4O75161 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.5□□□□□ -2.33
NPHP4O75161 RNY3P3-201ENST00000363816 102 ntBASIC0.49□□□□□ -2.33
NPHP4O75161 RNU6-842P-201ENST00000384269 107 ntBASIC0.49□□□□□ -2.33
NPHP4O75161 MTCYBP4-201ENST00000401524 249 ntBASIC0.49□□□□□ -2.33
NPHP4O75161 RNU5A-5P-201ENST00000411054 116 ntBASIC0.49□□□□□ -2.33
NPHP4O75161 USMG5P1-201ENST00000425964 177 ntBASIC0.49□□□□□ -2.33
NPHP4O75161 TRBVB-201ENST00000477100 408 ntBASIC0.49□□□□□ -2.33
NPHP4O75161 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.49□□□□□ -2.33
NPHP4O75161 COX6CP6-201ENST00000490840 228 ntBASIC0.49□□□□□ -2.33
NPHP4O75161 Y_RNA.688-201ENST00000516565 95 ntBASIC0.49□□□□□ -2.33
NPHP4O75161 RNU6-1088P-201ENST00000516850 104 ntBASIC0.49□□□□□ -2.33
NPHP4O75161 Y_RNA.706-201ENST00000516933 99 ntBASIC0.49□□□□□ -2.33
NPHP4O75161 AC022868.1-201ENST00000517767 391 ntBASIC0.49□□□□□ -2.33
NPHP4O75161 AC131055.1-201ENST00000584626 316 ntBASIC0.49□□□□□ -2.33
NPHP4O75161 AC012557.2-201ENST00000605919 418 ntBASIC0.49□□□□□ -2.33
NPHP4O75161 7SK.10-201ENST00000621414 298 ntBASIC0.49□□□□□ -2.33
NPHP4O75161 AC090617.10-201ENST00000624308 134 ntBASIC0.49□□□□□ -2.33
NPHP4O75161 AC127459.3-201ENST00000624328 466 ntBASIC0.49□□□□□ -2.33
NPHP4O75161 U6.115-201ENST00000636045 103 ntBASIC0.49□□□□□ -2.33
NPHP4O75161 SNORD68-201ENST00000363214 84 ntBASIC0.48□□□□□ -2.33
NPHP4O75161 RNU6-833P-201ENST00000363486 107 ntBASIC0.48□□□□□ -2.33
NPHP4O75161 Y_RNA.336-201ENST00000365307 109 ntBASIC0.48□□□□□ -2.33
NPHP4O75161 Y_RNA.473-201ENST00000384333 102 ntBASIC0.48□□□□□ -2.33
NPHP4O75161 MIR516B2-201ENST00000385190 85 ntBASIC0.48□□□□□ -2.33
NPHP4O75161 FABP5P4-201ENST00000437203 171 ntBASIC0.48□□□□□ -2.33
NPHP4O75161 AC114811.1-201ENST00000507207 168 ntBASIC0.48□□□□□ -2.33
NPHP4O75161 AC109810.1-201ENST00000534066 224 ntBASIC0.48□□□□□ -2.33
NPHP4O75161 NBR2-204ENST00000587322 63 ntBASIC0.48□□□□□ -2.33
NPHP4O75161 AF250324.2-201ENST00000608299 610 ntBASIC0.48□□□□□ -2.33
NPHP4O75161 AC093913.1-201ENST00000614178 329 ntBASIC0.48□□□□□ -2.33
NPHP4O75161 Y_RNA.51-201ENST00000362725 102 ntBASIC0.47□□□□□ -2.33
NPHP4O75161 RNU6-454P-201ENST00000364292 107 ntBASIC0.47□□□□□ -2.33
NPHP4O75161 RNU6-117P-201ENST00000365415 107 ntBASIC0.47□□□□□ -2.33
NPHP4O75161 RNU6-1297P-201ENST00000384415 104 ntBASIC0.47□□□□□ -2.33
NPHP4O75161 Y_RNA.518-201ENST00000384552 113 ntBASIC0.47□□□□□ -2.33
NPHP4O75161 MIR562-201ENST00000384894 95 ntBASIC0.47□□□□□ -2.33
NPHP4O75161 MIR1185-1-201ENST00000408598 86 ntBASIC0.47□□□□□ -2.33
NPHP4O75161 EIF1P2-201ENST00000428233 350 ntBASIC0.47□□□□□ -2.33
NPHP4O75161 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.47□□□□□ -2.33
NPHP4O75161 U8.22-201ENST00000459141 133 ntBASIC0.47□□□□□ -2.33
NPHP4O75161 RNU7-87P-201ENST00000459343 62 ntBASIC0.47□□□□□ -2.33
NPHP4O75161 RNU6-1278P-201ENST00000516130 107 ntBASIC0.47□□□□□ -2.33
NPHP4O75161 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.47□□□□□ -2.33
NPHP4O75161 AC120024.3-201ENST00000603167 156 ntBASIC0.47□□□□□ -2.33
NPHP4O75161 uc_338.17-201ENST00000619633 179 ntBASIC0.47□□□□□ -2.33
NPHP4O75161 MIR103A2-201ENST00000362154 78 ntBASIC0.47□□□□□ -2.33
NPHP4O75161 RNU6-1264P-201ENST00000383891 107 ntBASIC0.47□□□□□ -2.33
NPHP4O75161 MIR1298-201ENST00000408783 112 ntBASIC0.47□□□□□ -2.33
NPHP4O75161 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.47□□□□□ -2.33
NPHP4O75161 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms