Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 RNU6-388P-201ENST00000517012 105 ntBASIC2.2□□□□□ -2.06
SNX2O60749 RNU6-389P-201ENST00000517048 105 ntBASIC2.2□□□□□ -2.06
SNX2O60749 MIR3671-201ENST00000580455 88 ntBASIC2.2□□□□□ -2.06
SNX2O60749 MIR4448-201ENST00000584360 86 ntBASIC2.2□□□□□ -2.06
SNX2O60749 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.2□□□□□ -2.06
SNX2O60749 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SNX2O60749 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.19□□□□□ -2.06
SNX2O60749 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
SNX2O60749 Y_RNA.476-201ENST00000384347 108 ntBASIC2.19□□□□□ -2.06
SNX2O60749 RNU6-763P-201ENST00000390865 106 ntBASIC2.19□□□□□ -2.06
SNX2O60749 SNORA26.5-201ENST00000391215 123 ntBASIC2.19□□□□□ -2.06
SNX2O60749 MIR1261-201ENST00000408659 82 ntBASIC2.19□□□□□ -2.06
SNX2O60749 RNU6-710P-201ENST00000410424 105 ntBASIC2.19□□□□□ -2.06
SNX2O60749 RNA5SP511-201ENST00000410487 115 ntBASIC2.19□□□□□ -2.06
SNX2O60749 EBAG9P1-201ENST00000418955 543 ntBASIC2.19□□□□□ -2.06
SNX2O60749 HSPE1P13-201ENST00000451143 297 ntBASIC2.19□□□□□ -2.06
SNX2O60749 RPS20P10-201ENST00000451209 253 ntBASIC2.19□□□□□ -2.06
SNX2O60749 U8.19-201ENST00000459095 133 ntBASIC2.19□□□□□ -2.06
SNX2O60749 RPL23AP42-201ENST00000471152 471 ntBASIC2.19□□□□□ -2.06
SNX2O60749 AC104435.1-201ENST00000483483 166 ntBASIC2.19□□□□□ -2.06
SNX2O60749 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.19□□□□□ -2.06
SNX2O60749 RNU7-172P-201ENST00000517125 64 ntBASIC2.19□□□□□ -2.06
SNX2O60749 AC136628.3-201ENST00000521868 290 ntBASIC2.19□□□□□ -2.06
SNX2O60749 AC022254.1-201ENST00000567857 235 ntBASIC2.19□□□□□ -2.06
SNX2O60749 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.19□□□□□ -2.06
SNX2O60749 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.19□□□□□ -2.06
SNX2O60749 AC004832.4-201ENST00000608952 331 ntBASIC2.19□□□□□ -2.06
SNX2O60749 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.19□□□□□ -2.06
SNX2O60749 AC078938.1-201ENST00000620993 318 ntBASIC2.19□□□□□ -2.06
SNX2O60749 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.19□□□□□ -2.06
SNX2O60749 MIR6132-201ENST00000622083 109 ntBASIC2.19□□□□□ -2.06
SNX2O60749 snoU18.1-201ENST00000629629 71 ntBASIC2.19□□□□□ -2.06
SNX2O60749 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
SNX2O60749 AC134026.1-201ENST00000623249 2239 ntBASIC2.18□□□□□ -2.06
SNX2O60749 AC068700.1-201ENST00000565862 3754 ntBASIC2.18□□□□□ -2.06
SNX2O60749 RNU6-1272P-201ENST00000362776 107 ntBASIC2.18□□□□□ -2.06
SNX2O60749 Y_RNA.65-201ENST00000362846 100 ntBASIC2.18□□□□□ -2.06
SNX2O60749 Y_RNA.269-201ENST00000364685 89 ntBASIC2.18□□□□□ -2.06
SNX2O60749 Y_RNA.478-201ENST00000384358 107 ntBASIC2.18□□□□□ -2.06
SNX2O60749 Y_RNA.489-201ENST00000384410 101 ntBASIC2.18□□□□□ -2.06
SNX2O60749 SNORA11.4-201ENST00000408823 129 ntBASIC2.18□□□□□ -2.06
SNX2O60749 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.18□□□□□ -2.06
SNX2O60749 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.18□□□□□ -2.06
SNX2O60749 RPS29P21-201ENST00000496272 170 ntBASIC2.18□□□□□ -2.06
SNX2O60749 RNVU1-2-201ENST00000516326 135 ntBASIC2.18□□□□□ -2.06
SNX2O60749 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.18□□□□□ -2.06
SNX2O60749 MIR1273D-201ENST00000577266 86 ntBASIC2.18□□□□□ -2.06
SNX2O60749 AC005357.1-201ENST00000588399 301 ntBASIC2.18□□□□□ -2.06
SNX2O60749 AL162424.1-201ENST00000602325 221 ntBASIC2.18□□□□□ -2.06
SNX2O60749 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
SNX2O60749 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SNX2O60749 Y_RNA.456-201ENST00000384232 111 ntBASIC2.17□□□□□ -2.06
SNX2O60749 RNU6-1248P-201ENST00000391096 64 ntBASIC2.17□□□□□ -2.06
SNX2O60749 SNORD58.1-201ENST00000391313 66 ntBASIC2.17□□□□□ -2.06
SNX2O60749 RN7SKP192-201ENST00000411291 327 ntBASIC2.17□□□□□ -2.06
SNX2O60749 CST2P1-201ENST00000425770 87 ntBASIC2.17□□□□□ -2.06
SNX2O60749 RNU1-41P-201ENST00000516161 162 ntBASIC2.17□□□□□ -2.06
SNX2O60749 RNU1-48P-201ENST00000516400 162 ntBASIC2.17□□□□□ -2.06
SNX2O60749 AC015720.1-201ENST00000565251 277 ntBASIC2.17□□□□□ -2.06
SNX2O60749 AC073413.2-201ENST00000604332 360 ntBASIC2.17□□□□□ -2.06
SNX2O60749 BX284668.6-201ENST00000606899 438 ntBASIC2.17□□□□□ -2.06
SNX2O60749 AL008718.3-201ENST00000610217 321 ntBASIC2.17□□□□□ -2.06
SNX2O60749 Y_RNA.122-201ENST00000363331 96 ntBASIC2.16□□□□□ -2.06
SNX2O60749 SNORA72.4-201ENST00000384174 132 ntBASIC2.16□□□□□ -2.06
SNX2O60749 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.16□□□□□ -2.06
SNX2O60749 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.16□□□□□ -2.06
SNX2O60749 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.16□□□□□ -2.06
SNX2O60749 AL163195.1-201ENST00000496941 348 ntBASIC2.16□□□□□ -2.06
SNX2O60749 SNORD116-28-201ENST00000516123 91 ntBASIC2.16□□□□□ -2.06
SNX2O60749 RNU7-99P-201ENST00000516271 62 ntBASIC2.16□□□□□ -2.06
SNX2O60749 MIR5094-201ENST00000578766 85 ntBASIC2.16□□□□□ -2.06
SNX2O60749 MIR4648-201ENST00000580107 72 ntBASIC2.16□□□□□ -2.06
SNX2O60749 AC090425.1-201ENST00000610007 140 ntBASIC2.16□□□□□ -2.06
SNX2O60749 AL359075.3-201ENST00000613288 217 ntBASIC2.16□□□□□ -2.06
SNX2O60749 AC009831.4-201ENST00000620744 325 ntBASIC2.16□□□□□ -2.06
SNX2O60749 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.16□□□□□ -2.06
SNX2O60749 U8.7-201ENST00000364940 136 ntBASIC2.15□□□□□ -2.07
SNX2O60749 RNA5SP37-201ENST00000365420 130 ntBASIC2.15□□□□□ -2.07
SNX2O60749 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.15□□□□□ -2.07
SNX2O60749 BTF3P11-201ENST00000426582 477 ntBASIC2.15□□□□□ -2.07
SNX2O60749 AC104332.1-201ENST00000440471 797 ntBASIC2.15□□□□□ -2.07
SNX2O60749 SNORA44.1-201ENST00000517031 108 ntBASIC2.15□□□□□ -2.07
SNX2O60749 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.15□□□□□ -2.07
SNX2O60749 AC068647.2-201ENST00000637380 353 ntBASIC2.15□□□□□ -2.07
SNX2O60749 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
SNX2O60749 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
SNX2O60749 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
SNX2O60749 Y_RNA.82-201ENST00000363000 102 ntBASIC2.14□□□□□ -2.07
SNX2O60749 Y_RNA.92-201ENST00000363043 102 ntBASIC2.14□□□□□ -2.07
SNX2O60749 Y_RNA.235-201ENST00000364412 102 ntBASIC2.14□□□□□ -2.07
SNX2O60749 Y_RNA.306-201ENST00000365015 102 ntBASIC2.14□□□□□ -2.07
SNX2O60749 Y_RNA.312-201ENST00000365089 102 ntBASIC2.14□□□□□ -2.07
SNX2O60749 Y_RNA.322-201ENST00000365151 102 ntBASIC2.14□□□□□ -2.07
SNX2O60749 RNU6-211P-201ENST00000384047 107 ntBASIC2.14□□□□□ -2.07
SNX2O60749 SNORA67.3-201ENST00000384366 140 ntBASIC2.14□□□□□ -2.07
SNX2O60749 SNORA64-201ENST00000384674 134 ntBASIC2.14□□□□□ -2.07
SNX2O60749 MTCO2P33-201ENST00000402100 465 ntBASIC2.14□□□□□ -2.07
SNX2O60749 Y_RNA.590-201ENST00000410140 107 ntBASIC2.14□□□□□ -2.07
SNX2O60749 RNA5SP489-201ENST00000410986 109 ntBASIC2.14□□□□□ -2.07
SNX2O60749 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms