Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 Y_RNA.243-201ENST00000364481 109 ntBASIC1.34□□□□□ -2.19
CCDC188H7C350 SNORA25.8-201ENST00000364831 128 ntBASIC1.34□□□□□ -2.19
CCDC188H7C350 RNU6-20P-201ENST00000384106 107 ntBASIC1.34□□□□□ -2.19
CCDC188H7C350 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
CCDC188H7C350 RNA5SP482-201ENST00000391269 118 ntBASIC1.34□□□□□ -2.19
CCDC188H7C350 AL031003.1-201ENST00000404229 172 ntBASIC1.34□□□□□ -2.19
CCDC188H7C350 RPL30P13-201ENST00000418873 348 ntBASIC1.34□□□□□ -2.19
CCDC188H7C350 CALM2P4-201ENST00000430810 426 ntBASIC1.34□□□□□ -2.19
CCDC188H7C350 RNU1-123P-201ENST00000458950 160 ntBASIC1.34□□□□□ -2.19
CCDC188H7C350 SNORD19B-201ENST00000459623 84 ntBASIC1.34□□□□□ -2.19
CCDC188H7C350 AL049830.1-201ENST00000468034 425 ntBASIC1.34□□□□□ -2.19
CCDC188H7C350 RNU7-12P-201ENST00000516030 62 ntBASIC1.34□□□□□ -2.19
CCDC188H7C350 RN7SKP179-201ENST00000516126 217 ntBASIC1.34□□□□□ -2.19
CCDC188H7C350 RNU6-911P-201ENST00000516523 104 ntBASIC1.34□□□□□ -2.19
CCDC188H7C350 RNA5SP168-201ENST00000516642 112 ntBASIC1.34□□□□□ -2.19
CCDC188H7C350 RNU2-12P-201ENST00000517216 168 ntBASIC1.34□□□□□ -2.19
CCDC188H7C350 U6.92-201ENST00000636464 89 ntBASIC1.34□□□□□ -2.19
CCDC188H7C350 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CCDC188H7C350 RNU6-199P-201ENST00000362954 107 ntBASIC1.33□□□□□ -2.2
CCDC188H7C350 RNU6-626P-201ENST00000363354 107 ntBASIC1.33□□□□□ -2.2
CCDC188H7C350 Y_RNA.187-201ENST00000363918 113 ntBASIC1.33□□□□□ -2.2
CCDC188H7C350 SNORD115-30-201ENST00000364117 82 ntBASIC1.33□□□□□ -2.2
CCDC188H7C350 RPS29P29-201ENST00000456396 171 ntBASIC1.33□□□□□ -2.2
CCDC188H7C350 RPL39P38-201ENST00000467018 153 ntBASIC1.33□□□□□ -2.2
CCDC188H7C350 RNU6-322P-201ENST00000516010 103 ntBASIC1.33□□□□□ -2.2
CCDC188H7C350 AC093027.1-201ENST00000546698 429 ntBASIC1.33□□□□□ -2.2
CCDC188H7C350 AC005828.6-201ENST00000606610 232 ntBASIC1.33□□□□□ -2.2
CCDC188H7C350 AL138825.1-201ENST00000618587 192 ntBASIC1.33□□□□□ -2.2
CCDC188H7C350 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.33□□□□□ -2.2
CCDC188H7C350 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CCDC188H7C350 AC005592.1-201ENST00000566527 1640 ntBASIC1.33□□□□□ -2.2
CCDC188H7C350 Y_RNA.263-201ENST00000364659 114 ntBASIC1.32□□□□□ -2.2
CCDC188H7C350 RNU6-392P-201ENST00000364926 101 ntBASIC1.32□□□□□ -2.2
CCDC188H7C350 Y_RNA.466-201ENST00000384294 113 ntBASIC1.32□□□□□ -2.2
CCDC188H7C350 RNU6-424P-201ENST00000384367 105 ntBASIC1.32□□□□□ -2.2
CCDC188H7C350 MIR222-201ENST00000384992 110 ntBASIC1.32□□□□□ -2.2
CCDC188H7C350 U8.16-201ENST00000391279 133 ntBASIC1.32□□□□□ -2.2
CCDC188H7C350 RNU2-54P-201ENST00000410299 190 ntBASIC1.32□□□□□ -2.2
CCDC188H7C350 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.32□□□□□ -2.2
CCDC188H7C350 HSPE1P13-201ENST00000451143 297 ntBASIC1.32□□□□□ -2.2
CCDC188H7C350 snoU13.18-201ENST00000459483 104 ntBASIC1.32□□□□□ -2.2
CCDC188H7C350 RNU7-40P-201ENST00000516397 64 ntBASIC1.32□□□□□ -2.2
CCDC188H7C350 RNU6-1337P-201ENST00000516525 95 ntBASIC1.32□□□□□ -2.2
CCDC188H7C350 AC090821.2-201ENST00000523552 176 ntBASIC1.32□□□□□ -2.2
CCDC188H7C350 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.32□□□□□ -2.2
CCDC188H7C350 AC008269.2-201ENST00000561915 1105 ntBASIC1.32□□□□□ -2.2
CCDC188H7C350 AC055872.1-201ENST00000570978 278 ntBASIC1.32□□□□□ -2.2
CCDC188H7C350 AC091178.2-201ENST00000584401 117 ntBASIC1.32□□□□□ -2.2
CCDC188H7C350 RPS29P30-201ENST00000600975 111 ntBASIC1.32□□□□□ -2.2
CCDC188H7C350 AC068647.2-201ENST00000637380 353 ntBASIC1.32□□□□□ -2.2
CCDC188H7C350 Y_RNA.58-201ENST00000362807 102 ntBASIC1.31□□□□□ -2.2
CCDC188H7C350 SNORD68-201ENST00000363214 84 ntBASIC1.31□□□□□ -2.2
CCDC188H7C350 Y_RNA.122-201ENST00000363331 96 ntBASIC1.31□□□□□ -2.2
CCDC188H7C350 Y_RNA.154-201ENST00000363624 102 ntBASIC1.31□□□□□ -2.2
CCDC188H7C350 RNY3P1-201ENST00000365085 102 ntBASIC1.31□□□□□ -2.2
CCDC188H7C350 RNY3-201ENST00000365484 102 ntBASIC1.31□□□□□ -2.2
CCDC188H7C350 Y_RNA.463-201ENST00000384271 102 ntBASIC1.31□□□□□ -2.2
CCDC188H7C350 SNORA12.1-201ENST00000390873 148 ntBASIC1.31□□□□□ -2.2
CCDC188H7C350 AL451046.2-201ENST00000403074 277 ntBASIC1.31□□□□□ -2.2
CCDC188H7C350 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.31□□□□□ -2.2
CCDC188H7C350 RNU7-95P-201ENST00000459222 64 ntBASIC1.31□□□□□ -2.2
CCDC188H7C350 RNU6-947P-201ENST00000516264 106 ntBASIC1.31□□□□□ -2.2
CCDC188H7C350 RNU6-1012P-201ENST00000516606 109 ntBASIC1.31□□□□□ -2.2
CCDC188H7C350 MIR3664-201ENST00000579074 99 ntBASIC1.31□□□□□ -2.2
CCDC188H7C350 AC240442.1-201ENST00000616055 283 ntBASIC1.31□□□□□ -2.2
CCDC188H7C350 AC112487.2-201ENST00000637950 304 ntBASIC1.31□□□□□ -2.2
CCDC188H7C350 SNORD114-7-201ENST00000362520 77 ntBASIC1.3□□□□□ -2.2
CCDC188H7C350 Y_RNA.101-201ENST00000363154 102 ntBASIC1.3□□□□□ -2.2
CCDC188H7C350 RNU6-117P-201ENST00000365415 107 ntBASIC1.3□□□□□ -2.2
CCDC188H7C350 SNORD26-201ENST00000384147 75 ntBASIC1.3□□□□□ -2.2
CCDC188H7C350 RNU6-708P-201ENST00000384217 107 ntBASIC1.3□□□□□ -2.2
CCDC188H7C350 MIR489-201ENST00000384923 84 ntBASIC1.3□□□□□ -2.2
CCDC188H7C350 MIR150-201ENST00000385048 84 ntBASIC1.3□□□□□ -2.2
CCDC188H7C350 RNA5SP511-201ENST00000410487 115 ntBASIC1.3□□□□□ -2.2
CCDC188H7C350 AL354751.2-201ENST00000415471 210 ntBASIC1.3□□□□□ -2.2
CCDC188H7C350 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC188H7C350 SDAD1P3-201ENST00000427380 333 ntBASIC1.3□□□□□ -2.2
CCDC188H7C350 RPEP5-201ENST00000441137 268 ntBASIC1.3□□□□□ -2.2
CCDC188H7C350 AC009474.2-201ENST00000451383 136 ntBASIC1.3□□□□□ -2.2
CCDC188H7C350 AC093850.1-201ENST00000454121 251 ntBASIC1.3□□□□□ -2.2
CCDC188H7C350 OR9P1P-201ENST00000496431 281 ntBASIC1.3□□□□□ -2.2
CCDC188H7C350 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC188H7C350 AC092447.9-201ENST00000603395 144 ntBASIC1.3□□□□□ -2.2
CCDC188H7C350 Y_RNA.446-201ENST00000384178 104 ntBASIC1.29□□□□□ -2.2
CCDC188H7C350 RNU6-163P-201ENST00000384396 106 ntBASIC1.29□□□□□ -2.2
CCDC188H7C350 RNU6-1105P-201ENST00000384774 107 ntBASIC1.29□□□□□ -2.2
CCDC188H7C350 MIR1276-201ENST00000408707 83 ntBASIC1.29□□□□□ -2.2
CCDC188H7C350 CHEK2P4-201ENST00000450340 246 ntBASIC1.29□□□□□ -2.2
CCDC188H7C350 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.29□□□□□ -2.2
CCDC188H7C350 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.29□□□□□ -2.2
CCDC188H7C350 FGF7P4-201ENST00000509595 295 ntBASIC1.29□□□□□ -2.2
CCDC188H7C350 RAB11AP2-201ENST00000545905 639 ntBASIC1.29□□□□□ -2.2
CCDC188H7C350 MIR3660-201ENST00000584845 100 ntBASIC1.29□□□□□ -2.2
CCDC188H7C350 Y_RNA.772-201ENST00000606692 102 ntBASIC1.29□□□□□ -2.2
CCDC188H7C350 MIR6504-201ENST00000613520 61 ntBASIC1.29□□□□□ -2.2
CCDC188H7C350 MIR4272-201ENST00000635924 64 ntBASIC1.29□□□□□ -2.2
CCDC188H7C350 ZNF209P-201ENST00000593450 2304 ntBASIC1.28□□□□□ -2.2
CCDC188H7C350 AL391987.6-201ENST00000305671 199 ntBASIC1.28□□□□□ -2.2
CCDC188H7C350 Y_RNA.230-201ENST00000364348 109 ntBASIC1.28□□□□□ -2.2
CCDC188H7C350 RNU6-1080P-201ENST00000383982 107 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms