Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 RNU6-740P-201ENST00000364734 105 ntBASIC-2.25□□□□□ -2.77
LINC01549A6NIU2 Y_RNA.295-201ENST00000364918 102 ntBASIC-2.25□□□□□ -2.77
LINC01549A6NIU2 RPS29P13-201ENST00000402041 169 ntBASIC-2.25□□□□□ -2.77
LINC01549A6NIU2 RNU6-760P-201ENST00000516078 97 ntBASIC-2.25□□□□□ -2.77
LINC01549A6NIU2 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-2.25□□□□□ -2.77
LINC01549A6NIU2 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-2.25□□□□□ -2.77
LINC01549A6NIU2 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-2.25□□□□□ -2.77
LINC01549A6NIU2 SNORD115-48-201ENST00000364764 76 ntBASIC-2.26□□□□□ -2.77
LINC01549A6NIU2 RNU6-702P-201ENST00000364982 107 ntBASIC-2.26□□□□□ -2.77
LINC01549A6NIU2 RNU6-431P-201ENST00000383874 107 ntBASIC-2.26□□□□□ -2.77
LINC01549A6NIU2 RNU6-291P-201ENST00000384720 107 ntBASIC-2.26□□□□□ -2.77
LINC01549A6NIU2 MIR147A-201ENST00000385079 72 ntBASIC-2.26□□□□□ -2.77
LINC01549A6NIU2 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-2.26□□□□□ -2.77
LINC01549A6NIU2 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-2.26□□□□□ -2.77
LINC01549A6NIU2 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-2.26□□□□□ -2.77
LINC01549A6NIU2 AC021451.1-201ENST00000523498 1129 ntBASIC-2.26□□□□□ -2.77
LINC01549A6NIU2 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-2.26□□□□□ -2.77
LINC01549A6NIU2 AC012467.1-201ENST00000607740 256 ntBASIC-2.26□□□□□ -2.77
LINC01549A6NIU2 AC004223.4-201ENST00000612426 332 ntBASIC-2.26□□□□□ -2.77
LINC01549A6NIU2 MIR4320-201ENST00000636981 65 ntBASIC-2.26□□□□□ -2.77
LINC01549A6NIU2 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-2.27□□□□□ -2.77
LINC01549A6NIU2 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-2.27□□□□□ -2.77
LINC01549A6NIU2 TPTE2P1-204ENST00000435256 593 ntBASIC-2.27□□□□□ -2.77
LINC01549A6NIU2 EPS15P1-201ENST00000448836 336 ntBASIC-2.27□□□□□ -2.77
LINC01549A6NIU2 MTATP6P14-201ENST00000455189 673 ntBASIC-2.27□□□□□ -2.77
LINC01549A6NIU2 HSPE1P23-201ENST00000509838 286 ntBASIC-2.27□□□□□ -2.77
LINC01549A6NIU2 RNU6-344P-201ENST00000516635 111 ntBASIC-2.27□□□□□ -2.77
LINC01549A6NIU2 RNU7-188P-201ENST00000517063 64 ntBASIC-2.27□□□□□ -2.77
LINC01549A6NIU2 MIR4423-201ENST00000580922 80 ntBASIC-2.27□□□□□ -2.77
LINC01549A6NIU2 Z94722.1-201ENST00000604328 474 ntBASIC-2.27□□□□□ -2.77
LINC01549A6NIU2 MIR7844-201ENST00000616161 122 ntBASIC-2.27□□□□□ -2.77
LINC01549A6NIU2 RNU6-960P-201ENST00000364056 120 ntBASIC-2.28□□□□□ -2.77
LINC01549A6NIU2 Y_RNA.283-201ENST00000364798 112 ntBASIC-2.28□□□□□ -2.77
LINC01549A6NIU2 Y_RNA.536-201ENST00000384621 113 ntBASIC-2.28□□□□□ -2.77
LINC01549A6NIU2 AC090844.1-201ENST00000422019 156 ntBASIC-2.28□□□□□ -2.77
LINC01549A6NIU2 SNORD65B-201ENST00000459126 73 ntBASIC-2.28□□□□□ -2.77
LINC01549A6NIU2 MTCO3P38-201ENST00000468910 766 ntBASIC-2.28□□□□□ -2.77
LINC01549A6NIU2 AP003072.1-201ENST00000531740 145 ntBASIC-2.28□□□□□ -2.77
LINC01549A6NIU2 Y_RNA.12-201ENST00000362393 112 ntBASIC-2.29□□□□□ -2.78
LINC01549A6NIU2 RNU5E-6P-201ENST00000365574 115 ntBASIC-2.29□□□□□ -2.78
LINC01549A6NIU2 MIR588-201ENST00000384900 83 ntBASIC-2.29□□□□□ -2.78
LINC01549A6NIU2 U8.17-201ENST00000391292 132 ntBASIC-2.29□□□□□ -2.78
LINC01549A6NIU2 MTND2P9-201ENST00000422293 931 ntBASIC-2.29□□□□□ -2.78
LINC01549A6NIU2 snoU13.6-201ENST00000458785 104 ntBASIC-2.29□□□□□ -2.78
LINC01549A6NIU2 AC010493.1-201ENST00000513479 292 ntBASIC-2.29□□□□□ -2.78
LINC01549A6NIU2 SNORD22.1-201ENST00000516331 125 ntBASIC-2.29□□□□□ -2.78
LINC01549A6NIU2 RNU6-765P-201ENST00000516916 99 ntBASIC-2.29□□□□□ -2.78
LINC01549A6NIU2 AP000942.4-201ENST00000604811 241 ntBASIC-2.29□□□□□ -2.78
LINC01549A6NIU2 Y_RNA.13-201ENST00000362403 112 ntBASIC-2.3□□□□□ -2.78
LINC01549A6NIU2 RNY4P24-201ENST00000362735 96 ntBASIC-2.3□□□□□ -2.78
LINC01549A6NIU2 RNU6-371P-201ENST00000364283 108 ntBASIC-2.3□□□□□ -2.78
LINC01549A6NIU2 Y_RNA.374-201ENST00000365606 101 ntBASIC-2.3□□□□□ -2.78
LINC01549A6NIU2 MTCO1P57-201ENST00000432182 261 ntBASIC-2.3□□□□□ -2.78
LINC01549A6NIU2 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-2.3□□□□□ -2.78
LINC01549A6NIU2 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-2.3□□□□□ -2.78
LINC01549A6NIU2 AC117522.1-201ENST00000509821 380 ntBASIC-2.3□□□□□ -2.78
LINC01549A6NIU2 snoU83B.1-201ENST00000517136 88 ntBASIC-2.3□□□□□ -2.78
LINC01549A6NIU2 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-2.3□□□□□ -2.78
LINC01549A6NIU2 MTATP6P2-201ENST00000603319 678 ntBASIC-2.3□□□□□ -2.78
LINC01549A6NIU2 MIR4791-201ENST00000607666 84 ntBASIC-2.3□□□□□ -2.78
LINC01549A6NIU2 AL157770.1-201ENST00000623049 439 ntBASIC-2.3□□□□□ -2.78
LINC01549A6NIU2 AC231657.1-201ENST00000624313 397 ntBASIC-2.3□□□□□ -2.78
LINC01549A6NIU2 RNU4-66P-201ENST00000365199 138 ntBASIC-2.31□□□□□ -2.78
LINC01549A6NIU2 RNU6-784P-201ENST00000384330 106 ntBASIC-2.31□□□□□ -2.78
LINC01549A6NIU2 ERLEC1P1-201ENST00000433806 578 ntBASIC-2.31□□□□□ -2.78
LINC01549A6NIU2 AC108059.2-201ENST00000434626 151 ntBASIC-2.31□□□□□ -2.78
LINC01549A6NIU2 AC091133.4-201ENST00000511142 308 ntBASIC-2.31□□□□□ -2.78
LINC01549A6NIU2 RNU6-150P-201ENST00000516237 95 ntBASIC-2.31□□□□□ -2.78
LINC01549A6NIU2 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-2.31□□□□□ -2.78
LINC01549A6NIU2 RNU6-289P-201ENST00000364093 107 ntBASIC-2.32□□□□□ -2.78
LINC01549A6NIU2 RNU6-535P-201ENST00000384722 107 ntBASIC-2.32□□□□□ -2.78
LINC01549A6NIU2 RNU6-376P-201ENST00000384731 106 ntBASIC-2.32□□□□□ -2.78
LINC01549A6NIU2 SNORD93-201ENST00000408813 74 ntBASIC-2.32□□□□□ -2.78
LINC01549A6NIU2 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-2.32□□□□□ -2.78
LINC01549A6NIU2 MTCO2P11-201ENST00000431069 680 ntBASIC-2.32□□□□□ -2.78
LINC01549A6NIU2 HMGN2P32-201ENST00000444648 269 ntBASIC-2.32□□□□□ -2.78
LINC01549A6NIU2 AP000533.3-201ENST00000447704 118 ntBASIC-2.32□□□□□ -2.78
LINC01549A6NIU2 AP000542.1-201ENST00000448473 371 ntBASIC-2.32□□□□□ -2.78
LINC01549A6NIU2 HGF-207ENST00000453018 721 ntTSL 3 BASIC-2.32□□□□□ -2.78
LINC01549A6NIU2 HIF1AP1-201ENST00000553642 175 ntBASIC-2.32□□□□□ -2.78
LINC01549A6NIU2 MIR6082-201ENST00000613604 109 ntBASIC-2.32□□□□□ -2.78
LINC01549A6NIU2 SNORD65.1-201ENST00000390889 71 ntBASIC-2.33□□□□□ -2.78
LINC01549A6NIU2 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-2.33□□□□□ -2.78
LINC01549A6NIU2 MTATP6P17-201ENST00000431030 672 ntBASIC-2.33□□□□□ -2.78
LINC01549A6NIU2 FCF1P4-201ENST00000448326 183 ntBASIC-2.33□□□□□ -2.78
LINC01549A6NIU2 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-2.33□□□□□ -2.78
LINC01549A6NIU2 MTND2P6-201ENST00000455337 1030 ntBASIC-2.33□□□□□ -2.78
LINC01549A6NIU2 GMFBP1-201ENST00000467831 427 ntBASIC-2.33□□□□□ -2.78
LINC01549A6NIU2 AC026414.1-201ENST00000504046 698 ntBASIC-2.33□□□□□ -2.78
LINC01549A6NIU2 SNORD45.4-201ENST00000516629 73 ntBASIC-2.33□□□□□ -2.78
LINC01549A6NIU2 RNU6-1332P-201ENST00000516666 104 ntBASIC-2.33□□□□□ -2.78
LINC01549A6NIU2 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-2.33□□□□□ -2.78
LINC01549A6NIU2 MIR5692A1-201ENST00000580523 69 ntBASIC-2.33□□□□□ -2.78
LINC01549A6NIU2 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-2.33□□□□□ -2.78
LINC01549A6NIU2 AC073648.5-201ENST00000603502 305 ntBASIC-2.33□□□□□ -2.78
LINC01549A6NIU2 AP001836.1-201ENST00000604675 523 ntBASIC-2.33□□□□□ -2.78
LINC01549A6NIU2 AP002782.1-201ENST00000623107 614 ntBASIC-2.33□□□□□ -2.78
LINC01549A6NIU2 AC132825.6-201ENST00000638861 357 ntBASIC-2.33□□□□□ -2.78
LINC01549A6NIU2 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-2.34□□□□□ -2.78
LINC01549A6NIU2 MIR30D-201ENST00000362283 70 ntBASIC-2.34□□□□□ -2.78
Retrieved 100 of 98,524 protein–RNA pairs in 249.6 ms