Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 ICE2P2-201ENST00000483823 2787 ntBASIC3.82□□□□□ -1.8
RCCD1A6NED2 MFSD8-233ENST00000641482 4860 ntBASIC3.82□□□□□ -1.8
RCCD1A6NED2 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RCCD1A6NED2 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RCCD1A6NED2 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.82□□□□□ -1.8
RCCD1A6NED2 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
RCCD1A6NED2 Y_RNA.96-201ENST00000363092 109 ntBASIC3.82□□□□□ -1.8
RCCD1A6NED2 Y_RNA.99-201ENST00000363138 105 ntBASIC3.82□□□□□ -1.8
RCCD1A6NED2 RNU4-67P-201ENST00000364569 141 ntBASIC3.82□□□□□ -1.8
RCCD1A6NED2 SNORD38C-201ENST00000384381 69 ntBASIC3.82□□□□□ -1.8
RCCD1A6NED2 AL451046.2-201ENST00000403074 277 ntBASIC3.82□□□□□ -1.8
RCCD1A6NED2 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.82□□□□□ -1.8
RCCD1A6NED2 AC006539.3-201ENST00000454258 129 ntBASIC3.82□□□□□ -1.8
RCCD1A6NED2 TRBV12-1-201ENST00000479785 344 ntBASIC3.82□□□□□ -1.8
RCCD1A6NED2 MIR1255B1-201ENST00000636325 63 ntBASIC3.82□□□□□ -1.8
RCCD1A6NED2 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.82□□□□□ -1.8
RCCD1A6NED2 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.82□□□□□ -1.8
RCCD1A6NED2 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
RCCD1A6NED2 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.82□□□□□ -1.8
RCCD1A6NED2 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
RCCD1A6NED2 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
RCCD1A6NED2 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RCCD1A6NED2 Y_RNA.299-201ENST00000364973 94 ntBASIC3.81□□□□□ -1.8
RCCD1A6NED2 RNU6-1276P-201ENST00000365372 104 ntBASIC3.81□□□□□ -1.8
RCCD1A6NED2 SNORA27-201ENST00000384323 126 ntBASIC3.81□□□□□ -1.8
RCCD1A6NED2 SNORA18-201ENST00000384416 132 ntBASIC3.81□□□□□ -1.8
RCCD1A6NED2 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.81□□□□□ -1.8
RCCD1A6NED2 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.81□□□□□ -1.8
RCCD1A6NED2 RN7SL297P-201ENST00000483161 293 ntBASIC3.81□□□□□ -1.8
RCCD1A6NED2 RNU6-162P-201ENST00000516228 103 ntBASIC3.81□□□□□ -1.8
RCCD1A6NED2 RNA5SP367-201ENST00000516557 118 ntBASIC3.81□□□□□ -1.8
RCCD1A6NED2 MIR6875-201ENST00000617506 72 ntBASIC3.81□□□□□ -1.8
RCCD1A6NED2 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.81□□□□□ -1.8
RCCD1A6NED2 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.81□□□□□ -1.8
RCCD1A6NED2 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
RCCD1A6NED2 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.81□□□□□ -1.8
RCCD1A6NED2 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
RCCD1A6NED2 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.81□□□□□ -1.8
RCCD1A6NED2 AL161912.2-201ENST00000565707 3007 ntBASIC3.8□□□□□ -1.8
RCCD1A6NED2 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
RCCD1A6NED2 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
RCCD1A6NED2 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
RCCD1A6NED2 SNORD114-6-201ENST00000364393 72 ntBASIC3.8□□□□□ -1.8
RCCD1A6NED2 AL512326.2-201ENST00000426359 151 ntBASIC3.8□□□□□ -1.8
RCCD1A6NED2 TRIAP1P1-201ENST00000427062 225 ntBASIC3.8□□□□□ -1.8
RCCD1A6NED2 RNU7-96P-201ENST00000459535 64 ntBASIC3.8□□□□□ -1.8
RCCD1A6NED2 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.8□□□□□ -1.8
RCCD1A6NED2 YPEL5P2-201ENST00000605553 359 ntBASIC3.8□□□□□ -1.8
RCCD1A6NED2 Y_RNA.773-201ENST00000607168 90 ntBASIC3.8□□□□□ -1.8
RCCD1A6NED2 AC064859.1-201ENST00000624741 174 ntBASIC3.8□□□□□ -1.8
RCCD1A6NED2 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.8□□□□□ -1.8
RCCD1A6NED2 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
RCCD1A6NED2 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.8□□□□□ -1.8
RCCD1A6NED2 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
RCCD1A6NED2 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RCCD1A6NED2 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RCCD1A6NED2 RNU6-497P-201ENST00000365316 104 ntBASIC3.79□□□□□ -1.8
RCCD1A6NED2 CD24P4-201ENST00000382840 243 ntBASIC3.79□□□□□ -1.8
RCCD1A6NED2 RNU6-160P-201ENST00000384591 107 ntBASIC3.79□□□□□ -1.8
RCCD1A6NED2 SNORA11-201ENST00000408789 128 ntBASIC3.79□□□□□ -1.8
RCCD1A6NED2 MRPL35P3-201ENST00000421557 364 ntBASIC3.79□□□□□ -1.8
RCCD1A6NED2 RNU6-998P-201ENST00000515894 101 ntBASIC3.79□□□□□ -1.8
RCCD1A6NED2 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.79□□□□□ -1.8
RCCD1A6NED2 AC007536.1-201ENST00000533382 349 ntBASIC3.79□□□□□ -1.8
RCCD1A6NED2 CYCSP30-201ENST00000546447 172 ntBASIC3.79□□□□□ -1.8
RCCD1A6NED2 AL513534.2-201ENST00000603836 250 ntBASIC3.79□□□□□ -1.8
RCCD1A6NED2 AC021613.1-201ENST00000623880 111 ntBASIC3.79□□□□□ -1.8
RCCD1A6NED2 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RCCD1A6NED2 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
RCCD1A6NED2 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.78□□□□□ -1.8
RCCD1A6NED2 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RCCD1A6NED2 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.78□□□□□ -1.8
RCCD1A6NED2 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
RCCD1A6NED2 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.78□□□□□ -1.8
RCCD1A6NED2 Y_RNA.241-201ENST00000364470 117 ntBASIC3.78□□□□□ -1.8
RCCD1A6NED2 AC245047.3-201ENST00000429428 127 ntBASIC3.78□□□□□ -1.8
RCCD1A6NED2 AC018868.1-201ENST00000491307 315 ntBASIC3.78□□□□□ -1.8
RCCD1A6NED2 AC091826.1-201ENST00000514065 313 ntBASIC3.78□□□□□ -1.8
RCCD1A6NED2 MIR5187-201ENST00000583479 76 ntBASIC3.78□□□□□ -1.8
RCCD1A6NED2 AC095038.3-201ENST00000634439 195 ntBASIC3.78□□□□□ -1.8
RCCD1A6NED2 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
RCCD1A6NED2 Z83843.1-201ENST00000604070 3685 ntBASIC3.78□□□□□ -1.8
RCCD1A6NED2 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.78□□□□□ -1.8
RCCD1A6NED2 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
RCCD1A6NED2 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.77□□□□□ -1.81
RCCD1A6NED2 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RCCD1A6NED2 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.77□□□□□ -1.81
RCCD1A6NED2 RNU6-60P-201ENST00000364792 103 ntBASIC3.77□□□□□ -1.81
RCCD1A6NED2 MIR605-201ENST00000385078 83 ntBASIC3.77□□□□□ -1.81
RCCD1A6NED2 RNU6-972P-201ENST00000391208 107 ntBASIC3.77□□□□□ -1.81
RCCD1A6NED2 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.77□□□□□ -1.81
RCCD1A6NED2 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.77□□□□□ -1.81
RCCD1A6NED2 SNORA70.18-201ENST00000516696 98 ntBASIC3.77□□□□□ -1.81
RCCD1A6NED2 AC034229.5-201ENST00000624258 185 ntBASIC3.77□□□□□ -1.81
RCCD1A6NED2 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.77□□□□□ -1.81
RCCD1A6NED2 AL355596.1-201ENST00000565399 3996 ntBASIC3.76□□□□□ -1.81
RCCD1A6NED2 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RCCD1A6NED2 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.76□□□□□ -1.81
RCCD1A6NED2 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
RCCD1A6NED2 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms