Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 RNU6-1085P-201ENST00000363576 107 ntBASIC0.17□□□□□ -2.38
TRAV41A0A0B4J266 RNU6-1059P-201ENST00000363752 98 ntBASIC0.17□□□□□ -2.38
TRAV41A0A0B4J266 SNORD113.3-201ENST00000364630 78 ntBASIC0.17□□□□□ -2.38
TRAV41A0A0B4J266 AC117470.1-201ENST00000381974 330 ntBASIC0.17□□□□□ -2.38
TRAV41A0A0B4J266 Y_RNA.393-201ENST00000383936 102 ntBASIC0.17□□□□□ -2.38
TRAV41A0A0B4J266 Y_RNA.481-201ENST00000384373 102 ntBASIC0.17□□□□□ -2.38
TRAV41A0A0B4J266 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.17□□□□□ -2.38
TRAV41A0A0B4J266 AL390729.2-201ENST00000416137 156 ntBASIC0.17□□□□□ -2.38
TRAV41A0A0B4J266 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.17□□□□□ -2.38
TRAV41A0A0B4J266 EIF1P2-201ENST00000428233 350 ntBASIC0.17□□□□□ -2.38
TRAV41A0A0B4J266 AC108740.1-201ENST00000498629 225 ntBASIC0.17□□□□□ -2.38
TRAV41A0A0B4J266 Y_RNA.693-201ENST00000516641 110 ntBASIC0.17□□□□□ -2.38
TRAV41A0A0B4J266 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.17□□□□□ -2.38
TRAV41A0A0B4J266 MIR5093-201ENST00000583199 100 ntBASIC0.17□□□□□ -2.38
TRAV41A0A0B4J266 AL391262.2-201ENST00000622466 494 ntBASIC0.17□□□□□ -2.38
TRAV41A0A0B4J266 ZNF299P-201ENST00000406845 1804 ntBASIC0.16□□□□□ -2.38
TRAV41A0A0B4J266 MIR410-201ENST00000362222 80 ntBASIC0.16□□□□□ -2.38
TRAV41A0A0B4J266 Y_RNA.256-201ENST00000364594 104 ntBASIC0.16□□□□□ -2.38
TRAV41A0A0B4J266 RNU6-1145P-201ENST00000384246 107 ntBASIC0.16□□□□□ -2.38
TRAV41A0A0B4J266 RNY1P4-201ENST00000384595 115 ntBASIC0.16□□□□□ -2.38
TRAV41A0A0B4J266 MIR136-201ENST00000385207 82 ntBASIC0.16□□□□□ -2.38
TRAV41A0A0B4J266 MIR613-201ENST00000385248 95 ntBASIC0.16□□□□□ -2.38
TRAV41A0A0B4J266 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.16□□□□□ -2.38
TRAV41A0A0B4J266 DLGAP5P1-201ENST00000430307 464 ntBASIC0.16□□□□□ -2.38
TRAV41A0A0B4J266 ELOCP24-201ENST00000456370 334 ntBASIC0.16□□□□□ -2.38
TRAV41A0A0B4J266 SNORA25.10-201ENST00000515926 124 ntBASIC0.16□□□□□ -2.38
TRAV41A0A0B4J266 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.16□□□□□ -2.38
TRAV41A0A0B4J266 AC006362.1-201ENST00000567392 174 ntBASIC0.16□□□□□ -2.38
TRAV41A0A0B4J266 MIR4300-201ENST00000581016 96 ntBASIC0.16□□□□□ -2.38
TRAV41A0A0B4J266 AF250324.2-201ENST00000608299 610 ntBASIC0.16□□□□□ -2.38
TRAV41A0A0B4J266 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
TRAV41A0A0B4J266 AL359880.1-201ENST00000621879 266 ntBASIC0.16□□□□□ -2.38
TRAV41A0A0B4J266 MTND5P26-201ENST00000426018 1752 ntBASIC0.16□□□□□ -2.38
TRAV41A0A0B4J266 Y_RNA.48-201ENST00000362710 103 ntBASIC0.15□□□□□ -2.39
TRAV41A0A0B4J266 RNU6-1327P-201ENST00000365302 105 ntBASIC0.15□□□□□ -2.39
TRAV41A0A0B4J266 SNORA2B-201ENST00000384583 137 ntBASIC0.15□□□□□ -2.39
TRAV41A0A0B4J266 MIR573-201ENST00000384964 99 ntBASIC0.15□□□□□ -2.39
TRAV41A0A0B4J266 MTCO3P40-201ENST00000392516 676 ntBASIC0.15□□□□□ -2.39
TRAV41A0A0B4J266 RNU6-908P-201ENST00000410160 94 ntBASIC0.15□□□□□ -2.39
TRAV41A0A0B4J266 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.15□□□□□ -2.39
TRAV41A0A0B4J266 USMG5P1-201ENST00000425964 177 ntBASIC0.15□□□□□ -2.39
TRAV41A0A0B4J266 MTCO3P10-201ENST00000455912 772 ntBASIC0.15□□□□□ -2.39
TRAV41A0A0B4J266 SNORD123-201ENST00000459473 70 ntBASIC0.15□□□□□ -2.39
TRAV41A0A0B4J266 AC010424.1-201ENST00000506336 297 ntBASIC0.15□□□□□ -2.39
TRAV41A0A0B4J266 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.15□□□□□ -2.39
TRAV41A0A0B4J266 RNU7-43P-201ENST00000516554 64 ntBASIC0.15□□□□□ -2.39
TRAV41A0A0B4J266 RNU11-2P-201ENST00000516898 142 ntBASIC0.15□□□□□ -2.39
TRAV41A0A0B4J266 AC018448.1-201ENST00000552843 316 ntBASIC0.15□□□□□ -2.39
TRAV41A0A0B4J266 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.15□□□□□ -2.39
TRAV41A0A0B4J266 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.15□□□□□ -2.39
TRAV41A0A0B4J266 AC011712.1-201ENST00000588959 234 ntBASIC0.15□□□□□ -2.39
TRAV41A0A0B4J266 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.15□□□□□ -2.39
TRAV41A0A0B4J266 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.14□□□□□ -2.39
TRAV41A0A0B4J266 MIR103A1-201ENST00000362165 78 ntBASIC0.14□□□□□ -2.39
TRAV41A0A0B4J266 Y_RNA.243-201ENST00000364481 109 ntBASIC0.14□□□□□ -2.39
TRAV41A0A0B4J266 Y_RNA.361-201ENST00000365515 120 ntBASIC0.14□□□□□ -2.39
TRAV41A0A0B4J266 SNORD116-11-201ENST00000383882 92 ntBASIC0.14□□□□□ -2.39
TRAV41A0A0B4J266 MIR522-201ENST00000385071 87 ntBASIC0.14□□□□□ -2.39
TRAV41A0A0B4J266 RNU2-70P-201ENST00000410718 179 ntBASIC0.14□□□□□ -2.39
TRAV41A0A0B4J266 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.14□□□□□ -2.39
TRAV41A0A0B4J266 SEPT14P3-201ENST00000439401 183 ntBASIC0.14□□□□□ -2.39
TRAV41A0A0B4J266 AL732372.2-207ENST00000445840 183 ntBASIC0.14□□□□□ -2.39
TRAV41A0A0B4J266 SEPT14P2-201ENST00000453405 183 ntBASIC0.14□□□□□ -2.39
TRAV41A0A0B4J266 U8.22-201ENST00000459141 133 ntBASIC0.14□□□□□ -2.39
TRAV41A0A0B4J266 snoU13.21-201ENST00000459368 105 ntBASIC0.14□□□□□ -2.39
TRAV41A0A0B4J266 AC092989.1-201ENST00000481235 277 ntBASIC0.14□□□□□ -2.39
TRAV41A0A0B4J266 NDUFA4P2-201ENST00000489989 244 ntBASIC0.14□□□□□ -2.39
TRAV41A0A0B4J266 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.14□□□□□ -2.39
TRAV41A0A0B4J266 SEPT14P4-201ENST00000513445 186 ntBASIC0.14□□□□□ -2.39
TRAV41A0A0B4J266 Y_RNA.704-201ENST00000516851 102 ntBASIC0.14□□□□□ -2.39
TRAV41A0A0B4J266 Y_RNA.706-201ENST00000516933 99 ntBASIC0.14□□□□□ -2.39
TRAV41A0A0B4J266 FO082796.1-201ENST00000523795 183 ntBASIC0.14□□□□□ -2.39
TRAV41A0A0B4J266 AL512360.1-201ENST00000555346 234 ntBASIC0.14□□□□□ -2.39
TRAV41A0A0B4J266 AC090617.3-201ENST00000573670 475 ntBASIC0.14□□□□□ -2.39
TRAV41A0A0B4J266 MIR3942-201ENST00000585264 109 ntBASIC0.14□□□□□ -2.39
TRAV41A0A0B4J266 AC090582.1-201ENST00000636321 199 ntBASIC0.14□□□□□ -2.39
TRAV41A0A0B4J266 MIR924-201ENST00000638017 53 ntBASIC0.14□□□□□ -2.39
TRAV41A0A0B4J266 RNU6-874P-201ENST00000362390 105 ntBASIC0.13□□□□□ -2.39
TRAV41A0A0B4J266 RNU6-451P-201ENST00000362921 107 ntBASIC0.13□□□□□ -2.39
TRAV41A0A0B4J266 Y_RNA.112-201ENST00000363250 102 ntBASIC0.13□□□□□ -2.39
TRAV41A0A0B4J266 Y_RNA.253-201ENST00000364562 112 ntBASIC0.13□□□□□ -2.39
TRAV41A0A0B4J266 RNU6-596P-201ENST00000365395 98 ntBASIC0.13□□□□□ -2.39
TRAV41A0A0B4J266 RNU6-842P-201ENST00000384269 107 ntBASIC0.13□□□□□ -2.39
TRAV41A0A0B4J266 Y_RNA.530-201ENST00000384587 101 ntBASIC0.13□□□□□ -2.39
TRAV41A0A0B4J266 SNORD28B-201ENST00000390993 75 ntBASIC0.13□□□□□ -2.39
TRAV41A0A0B4J266 RNU6-613P-201ENST00000410412 108 ntBASIC0.13□□□□□ -2.39
TRAV41A0A0B4J266 Y_RNA.621-201ENST00000411065 96 ntBASIC0.13□□□□□ -2.39
TRAV41A0A0B4J266 MTND1P4-201ENST00000435196 415 ntBASIC0.13□□□□□ -2.39
TRAV41A0A0B4J266 MTND4LP16-201ENST00000440828 295 ntBASIC0.13□□□□□ -2.39
TRAV41A0A0B4J266 AC105313.1-201ENST00000509121 353 ntBASIC0.13□□□□□ -2.39
TRAV41A0A0B4J266 AC074133.1-201ENST00000515696 183 ntBASIC0.13□□□□□ -2.39
TRAV41A0A0B4J266 AC093027.1-201ENST00000546698 429 ntBASIC0.13□□□□□ -2.39
TRAV41A0A0B4J266 MIR4273-201ENST00000582824 84 ntBASIC0.13□□□□□ -2.39
TRAV41A0A0B4J266 AC012433.1-201ENST00000588916 398 ntBASIC0.13□□□□□ -2.39
TRAV41A0A0B4J266 AC104695.3-201ENST00000604052 296 ntBASIC0.13□□□□□ -2.39
TRAV41A0A0B4J266 AC100812.1-201ENST00000607622 580 ntBASIC0.13□□□□□ -2.39
TRAV41A0A0B4J266 AC104260.1-201ENST00000616660 539 ntBASIC0.13□□□□□ -2.39
TRAV41A0A0B4J266 AC008133.2-201ENST00000624540 351 ntBASIC0.13□□□□□ -2.39
TRAV41A0A0B4J266 MIR4251-201ENST00000635819 61 ntBASIC0.13□□□□□ -2.39
TRAV41A0A0B4J266 MIR3674-201ENST00000636576 68 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms