Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 RNU11-3P-201ENST00000391111 133 ntBASIC2.37□□□□□ -2.03
PCDHA3Q9Y5H8 Y_RNA.590-201ENST00000410140 107 ntBASIC2.37□□□□□ -2.03
PCDHA3Q9Y5H8 EBAG9P1-201ENST00000418955 543 ntBASIC2.37□□□□□ -2.03
PCDHA3Q9Y5H8 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.37□□□□□ -2.03
PCDHA3Q9Y5H8 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.37□□□□□ -2.03
PCDHA3Q9Y5H8 YWHAEP4-201ENST00000505390 198 ntBASIC2.37□□□□□ -2.03
PCDHA3Q9Y5H8 RNA5SP24-201ENST00000516478 95 ntBASIC2.37□□□□□ -2.03
PCDHA3Q9Y5H8 AC024995.1-201ENST00000523014 93 ntBASIC2.37□□□□□ -2.03
PCDHA3Q9Y5H8 AC121758.2-201ENST00000553271 193 ntBASIC2.37□□□□□ -2.03
PCDHA3Q9Y5H8 MIR5002-201ENST00000584713 97 ntBASIC2.37□□□□□ -2.03
PCDHA3Q9Y5H8 AC009779.6-201ENST00000603972 165 ntBASIC2.37□□□□□ -2.03
PCDHA3Q9Y5H8 AL359075.3-201ENST00000613288 217 ntBASIC2.37□□□□□ -2.03
PCDHA3Q9Y5H8 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
PCDHA3Q9Y5H8 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.37□□□□□ -2.03
PCDHA3Q9Y5H8 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
PCDHA3Q9Y5H8 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.36□□□□□ -2.03
PCDHA3Q9Y5H8 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PCDHA3Q9Y5H8 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PCDHA3Q9Y5H8 RNU6-862P-201ENST00000362804 105 ntBASIC2.36□□□□□ -2.03
PCDHA3Q9Y5H8 Y_RNA.515-201ENST00000384535 112 ntBASIC2.36□□□□□ -2.03
PCDHA3Q9Y5H8 RNU6-763P-201ENST00000390865 106 ntBASIC2.36□□□□□ -2.03
PCDHA3Q9Y5H8 SNORA26.5-201ENST00000391215 123 ntBASIC2.36□□□□□ -2.03
PCDHA3Q9Y5H8 RNU11-5P-201ENST00000391216 129 ntBASIC2.36□□□□□ -2.03
PCDHA3Q9Y5H8 RNA5SP467-201ENST00000391274 118 ntBASIC2.36□□□□□ -2.03
PCDHA3Q9Y5H8 RNU6-651P-201ENST00000411040 105 ntBASIC2.36□□□□□ -2.03
PCDHA3Q9Y5H8 RNU2-14P-201ENST00000411053 191 ntBASIC2.36□□□□□ -2.03
PCDHA3Q9Y5H8 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.36□□□□□ -2.03
PCDHA3Q9Y5H8 AC099677.2-201ENST00000436385 175 ntBASIC2.36□□□□□ -2.03
PCDHA3Q9Y5H8 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.36□□□□□ -2.03
PCDHA3Q9Y5H8 AC010409.1-201ENST00000487382 476 ntBASIC2.36□□□□□ -2.03
PCDHA3Q9Y5H8 Y_RNA.679-201ENST00000516416 91 ntBASIC2.36□□□□□ -2.03
PCDHA3Q9Y5H8 SNORA31.25-201ENST00000517242 134 ntBASIC2.36□□□□□ -2.03
PCDHA3Q9Y5H8 MIR5694-201ENST00000581190 76 ntBASIC2.36□□□□□ -2.03
PCDHA3Q9Y5H8 AC004832.4-201ENST00000608952 331 ntBASIC2.36□□□□□ -2.03
PCDHA3Q9Y5H8 AC245884.12-201ENST00000615364 59 ntBASIC2.36□□□□□ -2.03
PCDHA3Q9Y5H8 AC073349.3-201ENST00000617616 186 ntBASIC2.36□□□□□ -2.03
PCDHA3Q9Y5H8 CTSLP2-204ENST00000629029 392 ntBASIC2.36□□□□□ -2.03
PCDHA3Q9Y5H8 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.36□□□□□ -2.03
PCDHA3Q9Y5H8 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.36□□□□□ -2.03
PCDHA3Q9Y5H8 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
PCDHA3Q9Y5H8 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PCDHA3Q9Y5H8 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
PCDHA3Q9Y5H8 RNU6-1323P-201ENST00000384025 107 ntBASIC2.35□□□□□ -2.03
PCDHA3Q9Y5H8 SNORD116-13-201ENST00000384408 92 ntBASIC2.35□□□□□ -2.03
PCDHA3Q9Y5H8 AL139156.1-201ENST00000412785 841 ntBASIC2.35□□□□□ -2.03
PCDHA3Q9Y5H8 AL162725.1-201ENST00000435405 301 ntBASIC2.35□□□□□ -2.03
PCDHA3Q9Y5H8 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.35□□□□□ -2.03
PCDHA3Q9Y5H8 Y_RNA.638-201ENST00000459374 113 ntBASIC2.35□□□□□ -2.03
PCDHA3Q9Y5H8 COX6CP14-201ENST00000469580 174 ntBASIC2.35□□□□□ -2.03
PCDHA3Q9Y5H8 RNU1-142P-201ENST00000516682 145 ntBASIC2.35□□□□□ -2.03
PCDHA3Q9Y5H8 RNU7-128P-201ENST00000517247 62 ntBASIC2.35□□□□□ -2.03
PCDHA3Q9Y5H8 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.35□□□□□ -2.03
PCDHA3Q9Y5H8 AC005972.2-201ENST00000604690 348 ntBASIC2.35□□□□□ -2.03
PCDHA3Q9Y5H8 AL008718.3-201ENST00000610217 321 ntBASIC2.35□□□□□ -2.03
PCDHA3Q9Y5H8 AL442067.1-201ENST00000613261 223 ntBASIC2.35□□□□□ -2.03
PCDHA3Q9Y5H8 AC009831.4-201ENST00000620744 325 ntBASIC2.35□□□□□ -2.03
PCDHA3Q9Y5H8 U6.108-201ENST00000637764 58 ntBASIC2.35□□□□□ -2.03
PCDHA3Q9Y5H8 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
PCDHA3Q9Y5H8 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
PCDHA3Q9Y5H8 RNU6-899P-201ENST00000363947 107 ntBASIC2.34□□□□□ -2.03
PCDHA3Q9Y5H8 Y_RNA.292-201ENST00000364904 97 ntBASIC2.34□□□□□ -2.03
PCDHA3Q9Y5H8 RNY4P28-201ENST00000365281 93 ntBASIC2.34□□□□□ -2.03
PCDHA3Q9Y5H8 RNU6-211P-201ENST00000384047 107 ntBASIC2.34□□□□□ -2.03
PCDHA3Q9Y5H8 SNORA11.4-201ENST00000408823 129 ntBASIC2.34□□□□□ -2.03
PCDHA3Q9Y5H8 RNU6-1186P-201ENST00000410429 97 ntBASIC2.34□□□□□ -2.03
PCDHA3Q9Y5H8 RNA5SP511-201ENST00000410487 115 ntBASIC2.34□□□□□ -2.03
PCDHA3Q9Y5H8 RNA5SP508-201ENST00000411327 119 ntBASIC2.34□□□□□ -2.03
PCDHA3Q9Y5H8 BTF3P11-201ENST00000426582 477 ntBASIC2.34□□□□□ -2.03
PCDHA3Q9Y5H8 HMGN2P3-201ENST00000433603 273 ntBASIC2.34□□□□□ -2.03
PCDHA3Q9Y5H8 HMGN2P5-201ENST00000436882 273 ntBASIC2.34□□□□□ -2.03
PCDHA3Q9Y5H8 U8.19-201ENST00000459095 133 ntBASIC2.34□□□□□ -2.03
PCDHA3Q9Y5H8 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.34□□□□□ -2.03
PCDHA3Q9Y5H8 RNU6-63P-201ENST00000516690 95 ntBASIC2.34□□□□□ -2.03
PCDHA3Q9Y5H8 AC015720.1-201ENST00000565251 277 ntBASIC2.34□□□□□ -2.03
PCDHA3Q9Y5H8 AC011921.3-201ENST00000605540 361 ntBASIC2.34□□□□□ -2.03
PCDHA3Q9Y5H8 AC090425.1-201ENST00000610007 140 ntBASIC2.34□□□□□ -2.03
PCDHA3Q9Y5H8 AC013791.1-201ENST00000616619 62 ntBASIC2.34□□□□□ -2.03
PCDHA3Q9Y5H8 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.04
PCDHA3Q9Y5H8 AL355497.1-201ENST00000406262 551 ntBASIC2.33□□□□□ -2.04
PCDHA3Q9Y5H8 AC104332.1-201ENST00000440471 797 ntBASIC2.33□□□□□ -2.04
PCDHA3Q9Y5H8 RPS26P45-201ENST00000471748 340 ntBASIC2.33□□□□□ -2.04
PCDHA3Q9Y5H8 RNU7-193P-201ENST00000516723 65 ntBASIC2.33□□□□□ -2.04
PCDHA3Q9Y5H8 RNU7-116P-201ENST00000516940 62 ntBASIC2.33□□□□□ -2.04
PCDHA3Q9Y5H8 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.33□□□□□ -2.04
PCDHA3Q9Y5H8 AP000553.5-201ENST00000641933 54 ntBASIC2.33□□□□□ -2.04
PCDHA3Q9Y5H8 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.32□□□□□ -2.04
PCDHA3Q9Y5H8 RNU6-301P-201ENST00000384277 107 ntBASIC2.32□□□□□ -2.04
PCDHA3Q9Y5H8 MIR597-201ENST00000384968 97 ntBASIC2.32□□□□□ -2.04
PCDHA3Q9Y5H8 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
PCDHA3Q9Y5H8 AL135786.1-201ENST00000415892 214 ntBASIC2.32□□□□□ -2.04
PCDHA3Q9Y5H8 HSPE1P21-201ENST00000438283 308 ntBASIC2.32□□□□□ -2.04
PCDHA3Q9Y5H8 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.32□□□□□ -2.04
PCDHA3Q9Y5H8 RNU7-141P-201ENST00000459304 62 ntBASIC2.32□□□□□ -2.04
PCDHA3Q9Y5H8 RPS29P21-201ENST00000496272 170 ntBASIC2.32□□□□□ -2.04
PCDHA3Q9Y5H8 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.32□□□□□ -2.04
PCDHA3Q9Y5H8 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.32□□□□□ -2.04
PCDHA3Q9Y5H8 RNU7-115P-201ENST00000516433 55 ntBASIC2.32□□□□□ -2.04
PCDHA3Q9Y5H8 AP005660.1-201ENST00000522972 293 ntBASIC2.32□□□□□ -2.04
PCDHA3Q9Y5H8 MIR5692C2-201ENST00000577959 77 ntBASIC2.32□□□□□ -2.04
PCDHA3Q9Y5H8 MIR4529-201ENST00000578110 78 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms