Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.91□□□□□ -2.26
SHANK1Q9Y566 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.91□□□□□ -2.26
SHANK1Q9Y566 RNU6-961P-201ENST00000363893 105 ntBASIC0.91□□□□□ -2.26
SHANK1Q9Y566 SNORA63D-201ENST00000364359 132 ntBASIC0.91□□□□□ -2.26
SHANK1Q9Y566 SNORD87-201ENST00000364849 89 ntBASIC0.91□□□□□ -2.26
SHANK1Q9Y566 RNU6-331P-201ENST00000384724 107 ntBASIC0.91□□□□□ -2.26
SHANK1Q9Y566 MIR520A-201ENST00000384862 85 ntBASIC0.91□□□□□ -2.26
SHANK1Q9Y566 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
SHANK1Q9Y566 SNORD78.2-201ENST00000391076 69 ntBASIC0.91□□□□□ -2.26
SHANK1Q9Y566 MIR1185-2-201ENST00000408687 86 ntBASIC0.91□□□□□ -2.26
SHANK1Q9Y566 RNU6-1186P-201ENST00000410429 97 ntBASIC0.91□□□□□ -2.26
SHANK1Q9Y566 AC091021.1-201ENST00000468051 388 ntBASIC0.91□□□□□ -2.26
SHANK1Q9Y566 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.91□□□□□ -2.26
SHANK1Q9Y566 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.91□□□□□ -2.26
SHANK1Q9Y566 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.91□□□□□ -2.26
SHANK1Q9Y566 MIR924-201ENST00000638017 53 ntBASIC0.91□□□□□ -2.26
SHANK1Q9Y566 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.91□□□□□ -2.26
SHANK1Q9Y566 AC010615.1-201ENST00000594254 1764 ntBASIC0.91□□□□□ -2.26
SHANK1Q9Y566 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.9□□□□□ -2.26
SHANK1Q9Y566 RNU6-35P-201ENST00000384530 107 ntBASIC0.9□□□□□ -2.26
SHANK1Q9Y566 RNU1-78P-201ENST00000391248 165 ntBASIC0.9□□□□□ -2.26
SHANK1Q9Y566 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC0.9□□□□□ -2.26
SHANK1Q9Y566 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.9□□□□□ -2.26
SHANK1Q9Y566 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.9□□□□□ -2.26
SHANK1Q9Y566 AC091951.2-201ENST00000500762 203 ntBASIC0.9□□□□□ -2.26
SHANK1Q9Y566 RNU6-970P-201ENST00000516312 107 ntBASIC0.9□□□□□ -2.26
SHANK1Q9Y566 RNA5SP330-201ENST00000517096 96 ntBASIC0.9□□□□□ -2.26
SHANK1Q9Y566 MIR4299-201ENST00000577899 72 ntBASIC0.9□□□□□ -2.26
SHANK1Q9Y566 MIR3973-201ENST00000579824 107 ntBASIC0.9□□□□□ -2.26
SHANK1Q9Y566 MIR4438-201ENST00000585271 93 ntBASIC0.9□□□□□ -2.26
SHANK1Q9Y566 SNORD114-21-201ENST00000606412 72 ntBASIC0.9□□□□□ -2.26
SHANK1Q9Y566 MIR6857-201ENST00000613267 93 ntBASIC0.9□□□□□ -2.26
SHANK1Q9Y566 RNU6-112P-201ENST00000363599 104 ntBASIC0.9□□□□□ -2.27
SHANK1Q9Y566 Y_RNA.446-201ENST00000384178 104 ntBASIC0.9□□□□□ -2.27
SHANK1Q9Y566 RNU6-1297P-201ENST00000384415 104 ntBASIC0.9□□□□□ -2.27
SHANK1Q9Y566 SNORD12B-201ENST00000410433 91 ntBASIC0.9□□□□□ -2.27
SHANK1Q9Y566 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.9□□□□□ -2.27
SHANK1Q9Y566 SNORD19B-201ENST00000459623 84 ntBASIC0.9□□□□□ -2.27
SHANK1Q9Y566 AC022868.1-201ENST00000517767 391 ntBASIC0.9□□□□□ -2.27
SHANK1Q9Y566 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.9□□□□□ -2.27
SHANK1Q9Y566 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.9□□□□□ -2.27
SHANK1Q9Y566 AL050343.2-201ENST00000607338 280 ntBASIC0.9□□□□□ -2.27
SHANK1Q9Y566 SNORD114-23-201ENST00000363536 72 ntBASIC0.89□□□□□ -2.27
SHANK1Q9Y566 RNU6-743P-201ENST00000364151 106 ntBASIC0.89□□□□□ -2.27
SHANK1Q9Y566 Y_RNA.529-201ENST00000384586 119 ntBASIC0.89□□□□□ -2.27
SHANK1Q9Y566 MIR194-1-201ENST00000384892 85 ntBASIC0.89□□□□□ -2.27
SHANK1Q9Y566 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
SHANK1Q9Y566 MIR190B-201ENST00000401119 79 ntBASIC0.89□□□□□ -2.27
SHANK1Q9Y566 COX6CP10-201ENST00000416832 224 ntBASIC0.89□□□□□ -2.27
SHANK1Q9Y566 AC015922.2-201ENST00000435593 184 ntBASIC0.89□□□□□ -2.27
SHANK1Q9Y566 AL160236.1-201ENST00000556317 195 ntBASIC0.89□□□□□ -2.27
SHANK1Q9Y566 PRR13P7-201ENST00000605538 430 ntBASIC0.89□□□□□ -2.27
SHANK1Q9Y566 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.89□□□□□ -2.27
SHANK1Q9Y566 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
SHANK1Q9Y566 RNU6-874P-201ENST00000362390 105 ntBASIC0.89□□□□□ -2.27
SHANK1Q9Y566 RNA5SP276-201ENST00000362580 94 ntBASIC0.89□□□□□ -2.27
SHANK1Q9Y566 Y_RNA.252-201ENST00000364556 101 ntBASIC0.89□□□□□ -2.27
SHANK1Q9Y566 Y_RNA.314-201ENST00000365114 102 ntBASIC0.89□□□□□ -2.27
SHANK1Q9Y566 Y_RNA.331-201ENST00000365267 102 ntBASIC0.89□□□□□ -2.27
SHANK1Q9Y566 SNORA63.7-201ENST00000365579 123 ntBASIC0.89□□□□□ -2.27
SHANK1Q9Y566 MTCO3P19-201ENST00000415864 321 ntBASIC0.89□□□□□ -2.27
SHANK1Q9Y566 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.89□□□□□ -2.27
SHANK1Q9Y566 RNU7-87P-201ENST00000459343 62 ntBASIC0.89□□□□□ -2.27
SHANK1Q9Y566 RNU6-625P-201ENST00000459412 107 ntBASIC0.89□□□□□ -2.27
SHANK1Q9Y566 U8.20-201ENST00000459445 131 ntBASIC0.89□□□□□ -2.27
SHANK1Q9Y566 RNU1-142P-201ENST00000516682 145 ntBASIC0.89□□□□□ -2.27
SHANK1Q9Y566 RNU7-4P-201ENST00000516961 62 ntBASIC0.89□□□□□ -2.27
SHANK1Q9Y566 AL358944.1-201ENST00000528537 144 ntBASIC0.89□□□□□ -2.27
SHANK1Q9Y566 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.89□□□□□ -2.27
SHANK1Q9Y566 AC022217.4-201ENST00000604389 163 ntBASIC0.89□□□□□ -2.27
SHANK1Q9Y566 AC016925.2-201ENST00000605108 242 ntBASIC0.89□□□□□ -2.27
SHANK1Q9Y566 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.89□□□□□ -2.27
SHANK1Q9Y566 AL357075.2-201ENST00000614906 189 ntBASIC0.89□□□□□ -2.27
SHANK1Q9Y566 MTND4LP32-201ENST00000636111 270 ntBASIC0.89□□□□□ -2.27
SHANK1Q9Y566 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.89□□□□□ -2.27
SHANK1Q9Y566 ICE2P2-201ENST00000483823 2787 ntBASIC0.88□□□□□ -2.27
SHANK1Q9Y566 RNU6-490P-201ENST00000362985 107 ntBASIC0.88□□□□□ -2.27
SHANK1Q9Y566 Y_RNA.263-201ENST00000364659 114 ntBASIC0.88□□□□□ -2.27
SHANK1Q9Y566 RNU6-417P-201ENST00000384712 107 ntBASIC0.88□□□□□ -2.27
SHANK1Q9Y566 AC244636.1-201ENST00000421152 228 ntBASIC0.88□□□□□ -2.27
SHANK1Q9Y566 TOMM22P2-201ENST00000430735 237 ntBASIC0.88□□□□□ -2.27
SHANK1Q9Y566 RPS27P1-201ENST00000450552 247 ntBASIC0.88□□□□□ -2.27
SHANK1Q9Y566 AC112492.4-201ENST00000456549 352 ntBASIC0.88□□□□□ -2.27
SHANK1Q9Y566 SNORD65B-201ENST00000459126 73 ntBASIC0.88□□□□□ -2.27
SHANK1Q9Y566 AL163195.1-201ENST00000496941 348 ntBASIC0.88□□□□□ -2.27
SHANK1Q9Y566 HSBP1P1-201ENST00000555205 166 ntBASIC0.88□□□□□ -2.27
SHANK1Q9Y566 VN1R91P-201ENST00000594377 169 ntBASIC0.88□□□□□ -2.27
SHANK1Q9Y566 AL078596.1-201ENST00000624856 447 ntBASIC0.88□□□□□ -2.27
SHANK1Q9Y566 MIR4272-201ENST00000635924 64 ntBASIC0.88□□□□□ -2.27
SHANK1Q9Y566 SNORD33-201ENST00000362761 85 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 Y_RNA.463-201ENST00000384271 102 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 MIR891A-201ENST00000401237 79 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 AC016909.1-201ENST00000415916 166 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 AC114482.1-201ENST00000418010 247 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 RNU6-436P-201ENST00000516171 114 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 RNU6-699P-201ENST00000517081 110 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 AC091178.2-201ENST00000584401 117 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 AC010999.1-201ENST00000611856 324 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 MIR376A1-201ENST00000616574 68 ntBASIC0.87□□□□□ -2.27
SHANK1Q9Y566 U6.108-201ENST00000637764 58 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms