Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.41□□□□□ -2.02
SSX2IPQ9Y2D8 AL442067.1-201ENST00000613261 223 ntBASIC2.41□□□□□ -2.02
SSX2IPQ9Y2D8 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.41□□□□□ -2.02
SSX2IPQ9Y2D8 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
SSX2IPQ9Y2D8 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
SSX2IPQ9Y2D8 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.4□□□□□ -2.02
SSX2IPQ9Y2D8 Y_RNA.83-201ENST00000363005 113 ntBASIC2.4□□□□□ -2.03
SSX2IPQ9Y2D8 AL355796.1-201ENST00000406706 323 ntBASIC2.4□□□□□ -2.03
SSX2IPQ9Y2D8 RPS15AP28-201ENST00000435088 386 ntBASIC2.4□□□□□ -2.03
SSX2IPQ9Y2D8 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.4□□□□□ -2.03
SSX2IPQ9Y2D8 SNORD2.1-201ENST00000458762 69 ntBASIC2.4□□□□□ -2.03
SSX2IPQ9Y2D8 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.4□□□□□ -2.03
SSX2IPQ9Y2D8 RNA5SP200-201ENST00000516360 103 ntBASIC2.4□□□□□ -2.03
SSX2IPQ9Y2D8 AC136628.3-201ENST00000521868 290 ntBASIC2.4□□□□□ -2.03
SSX2IPQ9Y2D8 AC015712.3-201ENST00000559380 164 ntBASIC2.4□□□□□ -2.03
SSX2IPQ9Y2D8 AC073349.3-201ENST00000617616 186 ntBASIC2.4□□□□□ -2.03
SSX2IPQ9Y2D8 MIR6766-201ENST00000622641 72 ntBASIC2.4□□□□□ -2.03
SSX2IPQ9Y2D8 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
SSX2IPQ9Y2D8 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SSX2IPQ9Y2D8 SNORA27.1-201ENST00000362604 124 ntBASIC2.39□□□□□ -2.03
SSX2IPQ9Y2D8 RNU6-1272P-201ENST00000362776 107 ntBASIC2.39□□□□□ -2.03
SSX2IPQ9Y2D8 Y_RNA.199-201ENST00000364014 102 ntBASIC2.39□□□□□ -2.03
SSX2IPQ9Y2D8 RNY4P28-201ENST00000365281 93 ntBASIC2.39□□□□□ -2.03
SSX2IPQ9Y2D8 RNA5SP37-201ENST00000365420 130 ntBASIC2.39□□□□□ -2.03
SSX2IPQ9Y2D8 Y_RNA.456-201ENST00000384232 111 ntBASIC2.39□□□□□ -2.03
SSX2IPQ9Y2D8 Y_RNA.785-201ENST00000384290 109 ntBASIC2.39□□□□□ -2.03
SSX2IPQ9Y2D8 MIR221-201ENST00000385135 110 ntBASIC2.39□□□□□ -2.03
SSX2IPQ9Y2D8 SNORA11.4-201ENST00000408823 129 ntBASIC2.39□□□□□ -2.03
SSX2IPQ9Y2D8 RNU6-855P-201ENST00000410395 104 ntBASIC2.39□□□□□ -2.03
SSX2IPQ9Y2D8 EDDM3CP-201ENST00000415977 425 ntBASIC2.39□□□□□ -2.03
SSX2IPQ9Y2D8 HMGN2P3-201ENST00000433603 273 ntBASIC2.39□□□□□ -2.03
SSX2IPQ9Y2D8 HMGN2P5-201ENST00000436882 273 ntBASIC2.39□□□□□ -2.03
SSX2IPQ9Y2D8 RPL23AP7-203ENST00000449021 469 ntBASIC2.39□□□□□ -2.03
SSX2IPQ9Y2D8 AC108210.2-201ENST00000503681 201 ntBASIC2.39□□□□□ -2.03
SSX2IPQ9Y2D8 Y_RNA.676-201ENST00000516393 96 ntBASIC2.39□□□□□ -2.03
SSX2IPQ9Y2D8 RNU6-856P-201ENST00000516959 98 ntBASIC2.39□□□□□ -2.03
SSX2IPQ9Y2D8 AC087441.2-201ENST00000529141 262 ntBASIC2.39□□□□□ -2.03
SSX2IPQ9Y2D8 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.39□□□□□ -2.03
SSX2IPQ9Y2D8 AL078604.3-201ENST00000615580 211 ntBASIC2.39□□□□□ -2.03
SSX2IPQ9Y2D8 snoU18.1-201ENST00000629629 71 ntBASIC2.39□□□□□ -2.03
SSX2IPQ9Y2D8 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SSX2IPQ9Y2D8 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
SSX2IPQ9Y2D8 MIR21-201ENST00000362134 72 ntBASIC2.38□□□□□ -2.03
SSX2IPQ9Y2D8 MIRLET7G-201ENST00000362280 84 ntBASIC2.38□□□□□ -2.03
SSX2IPQ9Y2D8 Y_RNA.99-201ENST00000363138 105 ntBASIC2.38□□□□□ -2.03
SSX2IPQ9Y2D8 Y_RNA.297-201ENST00000364950 91 ntBASIC2.38□□□□□ -2.03
SSX2IPQ9Y2D8 RNU1-51P-201ENST00000365345 176 ntBASIC2.38□□□□□ -2.03
SSX2IPQ9Y2D8 Y_RNA.368-201ENST00000365547 113 ntBASIC2.38□□□□□ -2.03
SSX2IPQ9Y2D8 RNU6-651P-201ENST00000411040 105 ntBASIC2.38□□□□□ -2.03
SSX2IPQ9Y2D8 RNU2-64P-201ENST00000411315 191 ntBASIC2.38□□□□□ -2.03
SSX2IPQ9Y2D8 AC010154.1-201ENST00000425857 269 ntBASIC2.38□□□□□ -2.03
SSX2IPQ9Y2D8 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.38□□□□□ -2.03
SSX2IPQ9Y2D8 AC245102.2-201ENST00000448956 180 ntBASIC2.38□□□□□ -2.03
SSX2IPQ9Y2D8 HSPE1P13-201ENST00000451143 297 ntBASIC2.38□□□□□ -2.03
SSX2IPQ9Y2D8 AL138752.1-201ENST00000452964 351 ntBASIC2.38□□□□□ -2.03
SSX2IPQ9Y2D8 RPS27P21-201ENST00000486977 252 ntBASIC2.38□□□□□ -2.03
SSX2IPQ9Y2D8 MIR514B-201ENST00000516774 80 ntBASIC2.38□□□□□ -2.03
SSX2IPQ9Y2D8 RNU6-182P-201ENST00000516970 105 ntBASIC2.38□□□□□ -2.03
SSX2IPQ9Y2D8 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.38□□□□□ -2.03
SSX2IPQ9Y2D8 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
SSX2IPQ9Y2D8 ZNF720P1-201ENST00000562403 1939 ntBASIC2.37□□□□□ -2.03
SSX2IPQ9Y2D8 Y_RNA.341-201ENST00000365341 102 ntBASIC2.37□□□□□ -2.03
SSX2IPQ9Y2D8 RNU6-211P-201ENST00000384047 107 ntBASIC2.37□□□□□ -2.03
SSX2IPQ9Y2D8 RNU6-482P-201ENST00000391068 107 ntBASIC2.37□□□□□ -2.03
SSX2IPQ9Y2D8 Y_RNA.626-201ENST00000411288 95 ntBASIC2.37□□□□□ -2.03
SSX2IPQ9Y2D8 AC016909.1-201ENST00000415916 166 ntBASIC2.37□□□□□ -2.03
SSX2IPQ9Y2D8 BTF3P11-201ENST00000426582 477 ntBASIC2.37□□□□□ -2.03
SSX2IPQ9Y2D8 AL591806.2-201ENST00000433122 173 ntBASIC2.37□□□□□ -2.03
SSX2IPQ9Y2D8 MTND5P15-201ENST00000434246 349 ntBASIC2.37□□□□□ -2.03
SSX2IPQ9Y2D8 RPL23AP42-201ENST00000471152 471 ntBASIC2.37□□□□□ -2.03
SSX2IPQ9Y2D8 SNORD116-28-201ENST00000516123 91 ntBASIC2.37□□□□□ -2.03
SSX2IPQ9Y2D8 AP005660.1-201ENST00000522972 293 ntBASIC2.37□□□□□ -2.03
SSX2IPQ9Y2D8 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.37□□□□□ -2.03
SSX2IPQ9Y2D8 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.37□□□□□ -2.03
SSX2IPQ9Y2D8 AL359851.1-201ENST00000569460 4997 ntBASIC2.36□□□□□ -2.03
SSX2IPQ9Y2D8 MIR340-201ENST00000362125 95 ntBASIC2.36□□□□□ -2.03
SSX2IPQ9Y2D8 Y_RNA.29-201ENST00000362570 113 ntBASIC2.36□□□□□ -2.03
SSX2IPQ9Y2D8 Y_RNA.274-201ENST00000364714 101 ntBASIC2.36□□□□□ -2.03
SSX2IPQ9Y2D8 Y_RNA.287-201ENST00000364853 94 ntBASIC2.36□□□□□ -2.03
SSX2IPQ9Y2D8 RNU6-407P-201ENST00000365280 104 ntBASIC2.36□□□□□ -2.03
SSX2IPQ9Y2D8 MIR764-201ENST00000390811 85 ntBASIC2.36□□□□□ -2.03
SSX2IPQ9Y2D8 SNORA40.19-201ENST00000390846 128 ntBASIC2.36□□□□□ -2.03
SSX2IPQ9Y2D8 SNORA48.3-201ENST00000391081 134 ntBASIC2.36□□□□□ -2.03
SSX2IPQ9Y2D8 MIR1253-201ENST00000408273 105 ntBASIC2.36□□□□□ -2.03
SSX2IPQ9Y2D8 HMGN2P38-201ENST00000423806 265 ntBASIC2.36□□□□□ -2.03
SSX2IPQ9Y2D8 AC018634.1-201ENST00000437554 401 ntBASIC2.36□□□□□ -2.03
SSX2IPQ9Y2D8 RPS26P55-201ENST00000471178 356 ntBASIC2.36□□□□□ -2.03
SSX2IPQ9Y2D8 AC090255.1-201ENST00000495779 349 ntBASIC2.36□□□□□ -2.03
SSX2IPQ9Y2D8 RNA5SP20-201ENST00000515976 84 ntBASIC2.36□□□□□ -2.03
SSX2IPQ9Y2D8 RNU6-1146P-201ENST00000516282 102 ntBASIC2.36□□□□□ -2.03
SSX2IPQ9Y2D8 SNORA81.3-201ENST00000517283 198 ntBASIC2.36□□□□□ -2.03
SSX2IPQ9Y2D8 CYCSP26-201ENST00000534107 320 ntBASIC2.36□□□□□ -2.03
SSX2IPQ9Y2D8 AC026271.5-201ENST00000577873 130 ntBASIC2.36□□□□□ -2.03
SSX2IPQ9Y2D8 AC011921.3-201ENST00000605540 361 ntBASIC2.36□□□□□ -2.03
SSX2IPQ9Y2D8 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.35□□□□□ -2.03
SSX2IPQ9Y2D8 CENPCP1-201ENST00000533085 2578 ntBASIC2.35□□□□□ -2.03
SSX2IPQ9Y2D8 MIR411-201ENST00000362239 96 ntBASIC2.35□□□□□ -2.03
SSX2IPQ9Y2D8 Y_RNA.124-201ENST00000363339 93 ntBASIC2.35□□□□□ -2.03
SSX2IPQ9Y2D8 RNU6-801P-201ENST00000364087 105 ntBASIC2.35□□□□□ -2.03
SSX2IPQ9Y2D8 Y_RNA.310-201ENST00000365063 113 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 454.2 ms