Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC-1.15□□□□□ -2.59
CHD7Q9P2D1 AP001330.5-201ENST00000607176 411 ntBASIC-1.15□□□□□ -2.59
CHD7Q9P2D1 AC124016.2-201ENST00000610058 665 ntBASIC-1.15□□□□□ -2.59
CHD7Q9P2D1 AC097478.2-201ENST00000610572 514 ntBASIC-1.15□□□□□ -2.59
CHD7Q9P2D1 AC023510.2-201ENST00000622162 746 ntBASIC-1.15□□□□□ -2.59
CHD7Q9P2D1 SNORA33-201ENST00000363664 130 ntBASIC-1.16□□□□□ -2.59
CHD7Q9P2D1 RNU6-1229P-201ENST00000364295 107 ntBASIC-1.16□□□□□ -2.59
CHD7Q9P2D1 RNU6-512P-201ENST00000364438 103 ntBASIC-1.16□□□□□ -2.59
CHD7Q9P2D1 RNU6-580P-201ENST00000365159 107 ntBASIC-1.16□□□□□ -2.59
CHD7Q9P2D1 RNU6-466P-201ENST00000391224 103 ntBASIC-1.16□□□□□ -2.59
CHD7Q9P2D1 AL592310.1-201ENST00000414330 671 ntBASIC-1.16□□□□□ -2.59
CHD7Q9P2D1 MTCYBP5-201ENST00000423752 1135 ntBASIC-1.16□□□□□ -2.59
CHD7Q9P2D1 DPRXP1-201ENST00000426312 460 ntBASIC-1.16□□□□□ -2.59
CHD7Q9P2D1 MTATP6P17-201ENST00000431030 672 ntBASIC-1.16□□□□□ -2.59
CHD7Q9P2D1 RNU7-43P-201ENST00000516554 64 ntBASIC-1.16□□□□□ -2.59
CHD7Q9P2D1 RNU1-142P-201ENST00000516682 145 ntBASIC-1.16□□□□□ -2.59
CHD7Q9P2D1 SNORA25.17-201ENST00000517184 124 ntBASIC-1.16□□□□□ -2.59
CHD7Q9P2D1 AC069431.2-201ENST00000604149 1099 ntBASIC-1.16□□□□□ -2.59
CHD7Q9P2D1 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.16□□□□□ -2.6
CHD7Q9P2D1 AC098614.3-201ENST00000438957 440 ntBASIC-1.16□□□□□ -2.6
CHD7Q9P2D1 MTCYBP33-201ENST00000575007 1130 ntBASIC-1.16□□□□□ -2.6
CHD7Q9P2D1 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.16□□□□□ -2.6
CHD7Q9P2D1 Y_RNA.2-201ENST00000362330 96 ntBASIC-1.17□□□□□ -2.6
CHD7Q9P2D1 RNU6-622P-201ENST00000384272 103 ntBASIC-1.17□□□□□ -2.6
CHD7Q9P2D1 TRIM60P5Y-201ENST00000413946 574 ntBASIC-1.17□□□□□ -2.6
CHD7Q9P2D1 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.17□□□□□ -2.6
CHD7Q9P2D1 MIR1185-2-201ENST00000408687 86 ntBASIC-1.17□□□□□ -2.6
CHD7Q9P2D1 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-1.17□□□□□ -2.6
CHD7Q9P2D1 DPPA3P3-201ENST00000603842 430 ntBASIC-1.17□□□□□ -2.6
CHD7Q9P2D1 AC079610.2-201ENST00000604818 690 ntBASIC-1.17□□□□□ -2.6
CHD7Q9P2D1 AC010999.1-201ENST00000611856 324 ntBASIC-1.17□□□□□ -2.6
CHD7Q9P2D1 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-1.17□□□□□ -2.6
CHD7Q9P2D1 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-1.17□□□□□ -2.6
CHD7Q9P2D1 Y_RNA.32-201ENST00000362589 110 ntBASIC-1.17□□□□□ -2.6
CHD7Q9P2D1 Y_RNA.376-201ENST00000365638 108 ntBASIC-1.17□□□□□ -2.6
CHD7Q9P2D1 SNORA24-201ENST00000384096 131 ntBASIC-1.17□□□□□ -2.6
CHD7Q9P2D1 MIRLET7B-201ENST00000385140 83 ntBASIC-1.17□□□□□ -2.6
CHD7Q9P2D1 SNORA26.5-201ENST00000391215 123 ntBASIC-1.17□□□□□ -2.6
CHD7Q9P2D1 MIR190B-201ENST00000401119 79 ntBASIC-1.17□□□□□ -2.6
CHD7Q9P2D1 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.17□□□□□ -2.6
CHD7Q9P2D1 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-1.17□□□□□ -2.6
CHD7Q9P2D1 AC245047.3-201ENST00000429428 127 ntBASIC-1.17□□□□□ -2.6
CHD7Q9P2D1 AC005002.2-201ENST00000438228 269 ntBASIC-1.17□□□□□ -2.6
CHD7Q9P2D1 AC127455.1-201ENST00000565496 145 ntBASIC-1.17□□□□□ -2.6
CHD7Q9P2D1 MIR3129-201ENST00000581095 76 ntBASIC-1.17□□□□□ -2.6
CHD7Q9P2D1 AC099785.1-201ENST00000605697 437 ntBASIC-1.17□□□□□ -2.6
CHD7Q9P2D1 AL049777.1-201ENST00000622740 518 ntBASIC-1.17□□□□□ -2.6
CHD7Q9P2D1 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.18□□□□□ -2.6
CHD7Q9P2D1 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.18□□□□□ -2.6
CHD7Q9P2D1 RNU6-1151P-201ENST00000384684 107 ntBASIC-1.18□□□□□ -2.6
CHD7Q9P2D1 RPS29P13-201ENST00000402041 169 ntBASIC-1.18□□□□□ -2.6
CHD7Q9P2D1 RPL39P25-201ENST00000449384 154 ntBASIC-1.18□□□□□ -2.6
CHD7Q9P2D1 MTCO3P38-201ENST00000468910 766 ntBASIC-1.18□□□□□ -2.6
CHD7Q9P2D1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.18□□□□□ -2.6
CHD7Q9P2D1 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.18□□□□□ -2.6
CHD7Q9P2D1 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-1.18□□□□□ -2.6
CHD7Q9P2D1 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-1.18□□□□□ -2.6
CHD7Q9P2D1 MIR4251-201ENST00000635819 61 ntBASIC-1.18□□□□□ -2.6
CHD7Q9P2D1 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.18□□□□□ -2.6
CHD7Q9P2D1 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.18□□□□□ -2.6
CHD7Q9P2D1 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.18□□□□□ -2.6
CHD7Q9P2D1 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.18□□□□□ -2.6
CHD7Q9P2D1 MIR7-1-201ENST00000384871 110 ntBASIC-1.18□□□□□ -2.6
CHD7Q9P2D1 Y_RNA.617-201ENST00000410920 90 ntBASIC-1.18□□□□□ -2.6
CHD7Q9P2D1 AC013262.1-201ENST00000426710 252 ntBASIC-1.18□□□□□ -2.6
CHD7Q9P2D1 RNA5SP20-201ENST00000515976 84 ntBASIC-1.18□□□□□ -2.6
CHD7Q9P2D1 MTND2P38-201ENST00000522536 667 ntBASIC-1.18□□□□□ -2.6
CHD7Q9P2D1 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC-1.18□□□□□ -2.6
CHD7Q9P2D1 HMGB1P51-201ENST00000605166 638 ntBASIC-1.18□□□□□ -2.6
CHD7Q9P2D1 AC009994.1-201ENST00000606889 253 ntBASIC-1.18□□□□□ -2.6
CHD7Q9P2D1 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.19□□□□□ -2.6
CHD7Q9P2D1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC-1.19□□□□□ -2.6
CHD7Q9P2D1 RNU2-54P-201ENST00000410299 190 ntBASIC-1.19□□□□□ -2.6
CHD7Q9P2D1 RNU6-1025P-201ENST00000410629 104 ntBASIC-1.19□□□□□ -2.6
CHD7Q9P2D1 MTND1P32-201ENST00000433043 938 ntBASIC-1.19□□□□□ -2.6
CHD7Q9P2D1 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.19□□□□□ -2.6
CHD7Q9P2D1 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-1.19□□□□□ -2.6
CHD7Q9P2D1 AL138752.1-201ENST00000452964 351 ntBASIC-1.19□□□□□ -2.6
CHD7Q9P2D1 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-1.19□□□□□ -2.6
CHD7Q9P2D1 RNU2-34P-201ENST00000516534 121 ntBASIC-1.19□□□□□ -2.6
CHD7Q9P2D1 RNU6-850P-201ENST00000516934 103 ntBASIC-1.19□□□□□ -2.6
CHD7Q9P2D1 RNU7-188P-201ENST00000517063 64 ntBASIC-1.19□□□□□ -2.6
CHD7Q9P2D1 AL512506.1-201ENST00000613918 449 ntBASIC-1.19□□□□□ -2.6
CHD7Q9P2D1 uc_338.10-201ENST00000621872 182 ntBASIC-1.19□□□□□ -2.6
CHD7Q9P2D1 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC-1.19□□□□□ -2.6
CHD7Q9P2D1 RNU6-212P-201ENST00000362642 104 ntBASIC-1.19□□□□□ -2.6
CHD7Q9P2D1 RNU6-78P-201ENST00000362897 107 ntBASIC-1.19□□□□□ -2.6
CHD7Q9P2D1 SNORD115-33-201ENST00000363723 82 ntBASIC-1.19□□□□□ -2.6
CHD7Q9P2D1 Y_RNA.547-201ENST00000384654 119 ntBASIC-1.19□□□□□ -2.6
CHD7Q9P2D1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.19□□□□□ -2.6
CHD7Q9P2D1 AC073464.1-201ENST00000429823 534 ntBASIC-1.2□□□□□ -2.6
CHD7Q9P2D1 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC-1.2□□□□□ -2.6
CHD7Q9P2D1 AC090517.1-201ENST00000569307 266 ntBASIC-1.2□□□□□ -2.6
CHD7Q9P2D1 MIR4264-201ENST00000583520 66 ntBASIC-1.2□□□□□ -2.6
CHD7Q9P2D1 OR4H6P-202ENST00000603819 340 ntBASIC-1.2□□□□□ -2.6
CHD7Q9P2D1 AC092656.1-203ENST00000624134 423 ntBASIC-1.2□□□□□ -2.6
CHD7Q9P2D1 Y_RNA.481-201ENST00000384373 102 ntBASIC-1.2□□□□□ -2.6
CHD7Q9P2D1 MIR15B-201ENST00000385045 98 ntBASIC-1.2□□□□□ -2.6
CHD7Q9P2D1 RNU6-817P-201ENST00000391083 104 ntBASIC-1.2□□□□□ -2.6
CHD7Q9P2D1 AC104629.2-201ENST00000468627 598 ntBASIC-1.2□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms