Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.86□□□□□ -2.27
KLHL28Q9NXS3 MRPS10P1-201ENST00000448483 130 ntBASIC0.86□□□□□ -2.27
KLHL28Q9NXS3 AC107399.1-201ENST00000451226 265 ntBASIC0.86□□□□□ -2.27
KLHL28Q9NXS3 FGF7P6-202ENST00000451282 293 ntBASIC0.86□□□□□ -2.27
KLHL28Q9NXS3 RPS27P22-201ENST00000478056 241 ntBASIC0.86□□□□□ -2.27
KLHL28Q9NXS3 AC046134.1-201ENST00000514454 666 ntBASIC0.86□□□□□ -2.27
KLHL28Q9NXS3 Y_RNA.708-201ENST00000516950 96 ntBASIC0.86□□□□□ -2.27
KLHL28Q9NXS3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.86□□□□□ -2.27
KLHL28Q9NXS3 MTND4LP26-201ENST00000518144 282 ntBASIC0.86□□□□□ -2.27
KLHL28Q9NXS3 AC090617.3-201ENST00000573670 475 ntBASIC0.86□□□□□ -2.27
KLHL28Q9NXS3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.86□□□□□ -2.27
KLHL28Q9NXS3 CASC19-280ENST00000642102 1351 ntBASIC0.85□□□□□ -2.27
KLHL28Q9NXS3 RNY1-201ENST00000364228 113 ntBASIC0.85□□□□□ -2.27
KLHL28Q9NXS3 RNU6-879P-201ENST00000364328 108 ntBASIC0.85□□□□□ -2.27
KLHL28Q9NXS3 RNU6-593P-201ENST00000364716 112 ntBASIC0.85□□□□□ -2.27
KLHL28Q9NXS3 RNU1-36P-201ENST00000365130 165 ntBASIC0.85□□□□□ -2.27
KLHL28Q9NXS3 Y_RNA.358-201ENST00000365491 99 ntBASIC0.85□□□□□ -2.27
KLHL28Q9NXS3 SNORA20B-201ENST00000384220 132 ntBASIC0.85□□□□□ -2.27
KLHL28Q9NXS3 RNU6-318P-201ENST00000384283 103 ntBASIC0.85□□□□□ -2.27
KLHL28Q9NXS3 Y_RNA.482-201ENST00000384377 111 ntBASIC0.85□□□□□ -2.27
KLHL28Q9NXS3 RNU6-700P-201ENST00000391043 107 ntBASIC0.85□□□□□ -2.27
KLHL28Q9NXS3 AC002429.1-201ENST00000437672 148 ntBASIC0.85□□□□□ -2.27
KLHL28Q9NXS3 UQCRBP2-201ENST00000447827 297 ntBASIC0.85□□□□□ -2.27
KLHL28Q9NXS3 AC010598.1-201ENST00000510378 103 ntBASIC0.85□□□□□ -2.27
KLHL28Q9NXS3 SNORD79.1-201ENST00000516069 84 ntBASIC0.85□□□□□ -2.27
KLHL28Q9NXS3 RNA5SP168-201ENST00000516642 112 ntBASIC0.85□□□□□ -2.27
KLHL28Q9NXS3 RNU6-1223P-201ENST00000517124 104 ntBASIC0.85□□□□□ -2.27
KLHL28Q9NXS3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.85□□□□□ -2.27
KLHL28Q9NXS3 AC080078.2-201ENST00000603766 501 ntBASIC0.85□□□□□ -2.27
KLHL28Q9NXS3 MIR1244-1-201ENST00000612829 85 ntBASIC0.85□□□□□ -2.27
KLHL28Q9NXS3 AC098679.4-201ENST00000624241 654 ntBASIC0.85□□□□□ -2.27
KLHL28Q9NXS3 MIR1244-3-201ENST00000635744 85 ntBASIC0.85□□□□□ -2.27
KLHL28Q9NXS3 MIR1244-2-201ENST00000636449 85 ntBASIC0.85□□□□□ -2.27
KLHL28Q9NXS3 MIR1244-4-202ENST00000636813 85 ntBASIC0.85□□□□□ -2.27
KLHL28Q9NXS3 Y_RNA.72-201ENST00000362894 103 ntBASIC0.84□□□□□ -2.27
KLHL28Q9NXS3 Y_RNA.160-201ENST00000363677 92 ntBASIC0.84□□□□□ -2.27
KLHL28Q9NXS3 Y_RNA.363-201ENST00000365529 113 ntBASIC0.84□□□□□ -2.27
KLHL28Q9NXS3 RNU6-767P-201ENST00000384132 107 ntBASIC0.84□□□□□ -2.27
KLHL28Q9NXS3 SNORA75.4-201ENST00000391278 119 ntBASIC0.84□□□□□ -2.27
KLHL28Q9NXS3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
KLHL28Q9NXS3 Y_RNA.619-201ENST00000410951 90 ntBASIC0.84□□□□□ -2.27
KLHL28Q9NXS3 RNU6-1304P-201ENST00000411374 106 ntBASIC0.84□□□□□ -2.27
KLHL28Q9NXS3 PDCL2P1-201ENST00000419302 352 ntBASIC0.84□□□□□ -2.27
KLHL28Q9NXS3 MTCYBP10-201ENST00000424905 650 ntBASIC0.84□□□□□ -2.27
KLHL28Q9NXS3 AC092423.1-201ENST00000430165 186 ntBASIC0.84□□□□□ -2.27
KLHL28Q9NXS3 RPS4XP11-201ENST00000446897 772 ntBASIC0.84□□□□□ -2.27
KLHL28Q9NXS3 AC022868.1-201ENST00000517767 391 ntBASIC0.84□□□□□ -2.27
KLHL28Q9NXS3 AC022709.1-201ENST00000615967 87 ntBASIC0.84□□□□□ -2.27
KLHL28Q9NXS3 MIR6515-201ENST00000619843 57 ntBASIC0.84□□□□□ -2.27
KLHL28Q9NXS3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.83□□□□□ -2.28
KLHL28Q9NXS3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.83□□□□□ -2.28
KLHL28Q9NXS3 MIR373-201ENST00000362273 69 ntBASIC0.83□□□□□ -2.28
KLHL28Q9NXS3 RNU6-454P-201ENST00000364292 107 ntBASIC0.83□□□□□ -2.28
KLHL28Q9NXS3 Y_RNA.248-201ENST00000364501 109 ntBASIC0.83□□□□□ -2.28
KLHL28Q9NXS3 Y_RNA.279-201ENST00000364763 95 ntBASIC0.83□□□□□ -2.28
KLHL28Q9NXS3 SNORD114-24-201ENST00000365029 72 ntBASIC0.83□□□□□ -2.28
KLHL28Q9NXS3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
KLHL28Q9NXS3 RNU6-424P-201ENST00000384367 105 ntBASIC0.83□□□□□ -2.28
KLHL28Q9NXS3 AL451046.2-201ENST00000403074 277 ntBASIC0.83□□□□□ -2.28
KLHL28Q9NXS3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.83□□□□□ -2.28
KLHL28Q9NXS3 Y_RNA.599-201ENST00000410489 109 ntBASIC0.83□□□□□ -2.28
KLHL28Q9NXS3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.83□□□□□ -2.28
KLHL28Q9NXS3 AC097462.1-201ENST00000514125 324 ntBASIC0.83□□□□□ -2.28
KLHL28Q9NXS3 RNU6-322P-201ENST00000516010 103 ntBASIC0.83□□□□□ -2.28
KLHL28Q9NXS3 RNU6-917P-201ENST00000516294 104 ntBASIC0.83□□□□□ -2.28
KLHL28Q9NXS3 AC018448.1-201ENST00000552843 316 ntBASIC0.83□□□□□ -2.28
KLHL28Q9NXS3 MIR3973-201ENST00000579824 107 ntBASIC0.83□□□□□ -2.28
KLHL28Q9NXS3 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.83□□□□□ -2.28
KLHL28Q9NXS3 AC104260.1-201ENST00000616660 539 ntBASIC0.83□□□□□ -2.28
KLHL28Q9NXS3 AC092794.2-201ENST00000620933 563 ntBASIC0.83□□□□□ -2.28
KLHL28Q9NXS3 MIR6079-201ENST00000635807 62 ntBASIC0.83□□□□□ -2.28
KLHL28Q9NXS3 AC073544.1-201ENST00000600110 1595 ntBASIC0.83□□□□□ -2.28
KLHL28Q9NXS3 RNU6-845P-201ENST00000362578 103 ntBASIC0.82□□□□□ -2.28
KLHL28Q9NXS3 RNU6-99P-201ENST00000364721 107 ntBASIC0.82□□□□□ -2.28
KLHL28Q9NXS3 RNU6-1264P-201ENST00000383891 107 ntBASIC0.82□□□□□ -2.28
KLHL28Q9NXS3 RNU11-5P-201ENST00000391216 129 ntBASIC0.82□□□□□ -2.28
KLHL28Q9NXS3 RNU2-64P-201ENST00000411315 191 ntBASIC0.82□□□□□ -2.28
KLHL28Q9NXS3 CALM2P4-201ENST00000430810 426 ntBASIC0.82□□□□□ -2.28
KLHL28Q9NXS3 PCNPP5-201ENST00000452246 481 ntBASIC0.82□□□□□ -2.28
KLHL28Q9NXS3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.82□□□□□ -2.28
KLHL28Q9NXS3 SNORD124-201ENST00000459577 104 ntBASIC0.82□□□□□ -2.28
KLHL28Q9NXS3 AC091021.1-201ENST00000468051 388 ntBASIC0.82□□□□□ -2.28
KLHL28Q9NXS3 AC116353.2-201ENST00000505332 712 ntBASIC0.82□□□□□ -2.28
KLHL28Q9NXS3 PSMC1P5-201ENST00000512850 177 ntBASIC0.82□□□□□ -2.28
KLHL28Q9NXS3 RNU7-172P-201ENST00000517125 64 ntBASIC0.82□□□□□ -2.28
KLHL28Q9NXS3 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.82□□□□□ -2.28
KLHL28Q9NXS3 AL357312.1-201ENST00000603879 298 ntBASIC0.82□□□□□ -2.28
KLHL28Q9NXS3 PISRT1.1-201ENST00000616930 107 ntBASIC0.82□□□□□ -2.28
KLHL28Q9NXS3 AL669831.3-213ENST00000636676 183 ntBASIC0.82□□□□□ -2.28
KLHL28Q9NXS3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 SNORA27.1-201ENST00000362604 124 ntBASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 Y_RNA.124-201ENST00000363339 93 ntBASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 Y_RNA.265-201ENST00000364677 108 ntBASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 RNU6-407P-201ENST00000365280 104 ntBASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 SNORA2.2-201ENST00000365473 135 ntBASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 Y_RNA.498-201ENST00000384460 102 ntBASIC0.81□□□□□ -2.28
KLHL28Q9NXS3 MIR532-201ENST00000385025 91 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 192.8 ms