Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AC098869.1-201ENST00000481627 292 ntBASIC0.51□□□□□ -2.33
CLN6Q9NWW5 AC108729.3-201ENST00000513484 108 ntBASIC0.51□□□□□ -2.33
CLN6Q9NWW5 RNU6-63P-201ENST00000516690 95 ntBASIC0.51□□□□□ -2.33
CLN6Q9NWW5 AP003484.1-201ENST00000530974 250 ntBASIC0.51□□□□□ -2.33
CLN6Q9NWW5 AC004812.1-201ENST00000540773 146 ntBASIC0.51□□□□□ -2.33
CLN6Q9NWW5 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.51□□□□□ -2.33
CLN6Q9NWW5 AC025627.3-201ENST00000582078 182 ntBASIC0.51□□□□□ -2.33
CLN6Q9NWW5 AC005828.6-201ENST00000606610 232 ntBASIC0.51□□□□□ -2.33
CLN6Q9NWW5 SEPT14P17-201ENST00000617978 177 ntBASIC0.51□□□□□ -2.33
CLN6Q9NWW5 uc_338.17-201ENST00000619633 179 ntBASIC0.51□□□□□ -2.33
CLN6Q9NWW5 AC022079.1-201ENST00000621546 602 ntBASIC0.51□□□□□ -2.33
CLN6Q9NWW5 MIR3674-201ENST00000636576 68 ntBASIC0.51□□□□□ -2.33
CLN6Q9NWW5 MIR3662-201ENST00000637030 95 ntBASIC0.51□□□□□ -2.33
CLN6Q9NWW5 MIR410-201ENST00000362222 80 ntBASIC0.5□□□□□ -2.33
CLN6Q9NWW5 RNY1P10-201ENST00000363268 113 ntBASIC0.5□□□□□ -2.33
CLN6Q9NWW5 RNU6-700P-201ENST00000391043 107 ntBASIC0.5□□□□□ -2.33
CLN6Q9NWW5 SNORD99-201ENST00000408612 74 ntBASIC0.5□□□□□ -2.33
CLN6Q9NWW5 RNU6-733P-201ENST00000410759 104 ntBASIC0.5□□□□□ -2.33
CLN6Q9NWW5 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.5□□□□□ -2.33
CLN6Q9NWW5 AL162725.1-201ENST00000435405 301 ntBASIC0.5□□□□□ -2.33
CLN6Q9NWW5 U7.7-201ENST00000459276 60 ntBASIC0.5□□□□□ -2.33
CLN6Q9NWW5 RNA5SP121-201ENST00000516537 101 ntBASIC0.5□□□□□ -2.33
CLN6Q9NWW5 RNU6-1314P-201ENST00000517139 104 ntBASIC0.5□□□□□ -2.33
CLN6Q9NWW5 DEFB108E-201ENST00000524692 240 ntBASIC0.5□□□□□ -2.33
CLN6Q9NWW5 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.5□□□□□ -2.33
CLN6Q9NWW5 AC109810.1-201ENST00000534066 224 ntBASIC0.5□□□□□ -2.33
CLN6Q9NWW5 MIR4769-201ENST00000584126 77 ntBASIC0.5□□□□□ -2.33
CLN6Q9NWW5 AC093913.1-201ENST00000614178 329 ntBASIC0.5□□□□□ -2.33
CLN6Q9NWW5 7SK.10-201ENST00000621414 298 ntBASIC0.5□□□□□ -2.33
CLN6Q9NWW5 AC068700.1-201ENST00000565862 3754 ntBASIC0.5□□□□□ -2.33
CLN6Q9NWW5 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
CLN6Q9NWW5 SNORA25.3-201ENST00000363205 127 ntBASIC0.49□□□□□ -2.33
CLN6Q9NWW5 RNU6-1297P-201ENST00000384415 104 ntBASIC0.49□□□□□ -2.33
CLN6Q9NWW5 Y_RNA.559-201ENST00000384686 107 ntBASIC0.49□□□□□ -2.33
CLN6Q9NWW5 MIR520C-201ENST00000385005 87 ntBASIC0.49□□□□□ -2.33
CLN6Q9NWW5 MIR1298-201ENST00000408783 112 ntBASIC0.49□□□□□ -2.33
CLN6Q9NWW5 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.49□□□□□ -2.33
CLN6Q9NWW5 DLGAP5P1-201ENST00000430307 464 ntBASIC0.49□□□□□ -2.33
CLN6Q9NWW5 RPL23AP50-201ENST00000434149 455 ntBASIC0.49□□□□□ -2.33
CLN6Q9NWW5 MTND1P17-201ENST00000448961 204 ntBASIC0.49□□□□□ -2.33
CLN6Q9NWW5 AL157398.1-201ENST00000452981 186 ntBASIC0.49□□□□□ -2.33
CLN6Q9NWW5 ELOCP24-201ENST00000456370 334 ntBASIC0.49□□□□□ -2.33
CLN6Q9NWW5 AC067940.1-201ENST00000458411 300 ntBASIC0.49□□□□□ -2.33
CLN6Q9NWW5 SNORD5.1-201ENST00000458800 75 ntBASIC0.49□□□□□ -2.33
CLN6Q9NWW5 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.49□□□□□ -2.33
CLN6Q9NWW5 RNU4-54P-201ENST00000516428 129 ntBASIC0.49□□□□□ -2.33
CLN6Q9NWW5 RNU6-506P-201ENST00000516553 94 ntBASIC0.49□□□□□ -2.33
CLN6Q9NWW5 RNU6-1088P-201ENST00000516850 104 ntBASIC0.49□□□□□ -2.33
CLN6Q9NWW5 AC011604.1-201ENST00000545978 196 ntBASIC0.49□□□□□ -2.33
CLN6Q9NWW5 AC133485.1-201ENST00000567176 124 ntBASIC0.49□□□□□ -2.33
CLN6Q9NWW5 AC138907.6-201ENST00000568401 126 ntBASIC0.49□□□□□ -2.33
CLN6Q9NWW5 MIR5701-3-201ENST00000578890 82 ntBASIC0.49□□□□□ -2.33
CLN6Q9NWW5 MIR5701-1-201ENST00000585138 82 ntBASIC0.49□□□□□ -2.33
CLN6Q9NWW5 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.49□□□□□ -2.33
CLN6Q9NWW5 MIR5701-2-201ENST00000615634 82 ntBASIC0.49□□□□□ -2.33
CLN6Q9NWW5 AC100810.6-201ENST00000638068 285 ntBASIC0.49□□□□□ -2.33
CLN6Q9NWW5 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
CLN6Q9NWW5 RNU6-454P-201ENST00000364292 107 ntBASIC0.48□□□□□ -2.33
CLN6Q9NWW5 MIR516B2-201ENST00000385190 85 ntBASIC0.48□□□□□ -2.33
CLN6Q9NWW5 RNU6-321P-201ENST00000410912 106 ntBASIC0.48□□□□□ -2.33
CLN6Q9NWW5 AL139396.1-201ENST00000421137 167 ntBASIC0.48□□□□□ -2.33
CLN6Q9NWW5 MTND1P29-201ENST00000448112 647 ntBASIC0.48□□□□□ -2.33
CLN6Q9NWW5 AC098826.2-201ENST00000452011 651 ntBASIC0.48□□□□□ -2.33
CLN6Q9NWW5 RNU6-566P-201ENST00000516790 107 ntBASIC0.48□□□□□ -2.33
CLN6Q9NWW5 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.48□□□□□ -2.33
CLN6Q9NWW5 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.48□□□□□ -2.33
CLN6Q9NWW5 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
CLN6Q9NWW5 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
CLN6Q9NWW5 MIR96-201ENST00000362288 78 ntBASIC0.47□□□□□ -2.33
CLN6Q9NWW5 SNORD114-7-201ENST00000362520 77 ntBASIC0.47□□□□□ -2.33
CLN6Q9NWW5 SNORD14.1-201ENST00000365609 90 ntBASIC0.47□□□□□ -2.33
CLN6Q9NWW5 Y_RNA.402-201ENST00000383972 102 ntBASIC0.47□□□□□ -2.33
CLN6Q9NWW5 RNU6-831P-201ENST00000384548 107 ntBASIC0.47□□□□□ -2.33
CLN6Q9NWW5 Y_RNA.557-201ENST00000384680 107 ntBASIC0.47□□□□□ -2.33
CLN6Q9NWW5 MIR520E-201ENST00000384867 87 ntBASIC0.47□□□□□ -2.33
CLN6Q9NWW5 AL354751.2-201ENST00000415471 210 ntBASIC0.47□□□□□ -2.33
CLN6Q9NWW5 SNORA40.9-201ENST00000515895 93 ntBASIC0.47□□□□□ -2.33
CLN6Q9NWW5 RNU7-41P-201ENST00000515917 61 ntBASIC0.47□□□□□ -2.33
CLN6Q9NWW5 SNORA74.3-201ENST00000517108 154 ntBASIC0.47□□□□□ -2.33
CLN6Q9NWW5 MTND4LP26-201ENST00000518144 282 ntBASIC0.47□□□□□ -2.33
CLN6Q9NWW5 AP003716.2-201ENST00000528260 108 ntBASIC0.47□□□□□ -2.33
CLN6Q9NWW5 AC018659.1-201ENST00000551083 169 ntBASIC0.47□□□□□ -2.33
CLN6Q9NWW5 AC245505.1-201ENST00000556398 224 ntBASIC0.47□□□□□ -2.33
CLN6Q9NWW5 MIR4790-201ENST00000577799 79 ntBASIC0.47□□□□□ -2.33
CLN6Q9NWW5 AL136317.1-201ENST00000612653 226 ntBASIC0.47□□□□□ -2.33
CLN6Q9NWW5 AL591926.4-201ENST00000616895 298 ntBASIC0.47□□□□□ -2.33
CLN6Q9NWW5 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
CLN6Q9NWW5 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.46□□□□□ -2.34
CLN6Q9NWW5 RNA5SP48-201ENST00000363969 126 ntBASIC0.46□□□□□ -2.34
CLN6Q9NWW5 U8.5-201ENST00000364528 136 ntBASIC0.46□□□□□ -2.34
CLN6Q9NWW5 RNU1-93P-201ENST00000364704 169 ntBASIC0.46□□□□□ -2.34
CLN6Q9NWW5 MIR15B-201ENST00000385045 98 ntBASIC0.46□□□□□ -2.34
CLN6Q9NWW5 MIR136-201ENST00000385207 82 ntBASIC0.46□□□□□ -2.34
CLN6Q9NWW5 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.46□□□□□ -2.34
CLN6Q9NWW5 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
CLN6Q9NWW5 MIR1185-1-201ENST00000408598 86 ntBASIC0.46□□□□□ -2.34
CLN6Q9NWW5 RNA5SP511-201ENST00000410487 115 ntBASIC0.46□□□□□ -2.34
CLN6Q9NWW5 RNU6-994P-201ENST00000410507 111 ntBASIC0.46□□□□□ -2.34
CLN6Q9NWW5 MTCYBP10-201ENST00000424905 650 ntBASIC0.46□□□□□ -2.34
CLN6Q9NWW5 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms