Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.79□□□□□ -2.12
SLC6A13Q9NSD5 SNORA40.15-201ENST00000516884 107 ntBASIC1.79□□□□□ -2.12
SLC6A13Q9NSD5 RPL21P9-201ENST00000556149 474 ntBASIC1.79□□□□□ -2.12
SLC6A13Q9NSD5 MIR4769-201ENST00000584126 77 ntBASIC1.79□□□□□ -2.12
SLC6A13Q9NSD5 AC006504.6-201ENST00000590142 199 ntBASIC1.79□□□□□ -2.12
SLC6A13Q9NSD5 AC012493.3-201ENST00000604494 112 ntBASIC1.79□□□□□ -2.12
SLC6A13Q9NSD5 SNORD113-5-201ENST00000607261 78 ntBASIC1.79□□□□□ -2.12
SLC6A13Q9NSD5 AC127459.3-201ENST00000624328 466 ntBASIC1.79□□□□□ -2.12
SLC6A13Q9NSD5 AC018630.2-201ENST00000534866 2403 ntBASIC1.79□□□□□ -2.12
SLC6A13Q9NSD5 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SLC6A13Q9NSD5 Y_RNA.153-201ENST00000363615 91 ntBASIC1.78□□□□□ -2.12
SLC6A13Q9NSD5 RNU6-376P-201ENST00000384731 106 ntBASIC1.78□□□□□ -2.12
SLC6A13Q9NSD5 RNU6-360P-201ENST00000390944 104 ntBASIC1.78□□□□□ -2.12
SLC6A13Q9NSD5 RNA5SP109-201ENST00000391010 116 ntBASIC1.78□□□□□ -2.12
SLC6A13Q9NSD5 AL590004.1-201ENST00000405321 300 ntBASIC1.78□□□□□ -2.12
SLC6A13Q9NSD5 RNU4-30P-201ENST00000410245 143 ntBASIC1.78□□□□□ -2.12
SLC6A13Q9NSD5 AL606517.2-201ENST00000442855 241 ntBASIC1.78□□□□□ -2.12
SLC6A13Q9NSD5 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.78□□□□□ -2.12
SLC6A13Q9NSD5 RPL36AP21-201ENST00000490372 323 ntBASIC1.78□□□□□ -2.12
SLC6A13Q9NSD5 SEPT14P8-201ENST00000508026 178 ntBASIC1.78□□□□□ -2.12
SLC6A13Q9NSD5 AC022217.4-201ENST00000604389 163 ntBASIC1.78□□□□□ -2.12
SLC6A13Q9NSD5 AC103810.8-201ENST00000607347 118 ntBASIC1.78□□□□□ -2.12
SLC6A13Q9NSD5 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
SLC6A13Q9NSD5 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.77□□□□□ -2.13
SLC6A13Q9NSD5 Y_RNA.210-201ENST00000364161 110 ntBASIC1.77□□□□□ -2.13
SLC6A13Q9NSD5 Y_RNA.329-201ENST00000365209 107 ntBASIC1.77□□□□□ -2.13
SLC6A13Q9NSD5 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.77□□□□□ -2.13
SLC6A13Q9NSD5 RNU6-950P-201ENST00000384651 107 ntBASIC1.77□□□□□ -2.13
SLC6A13Q9NSD5 SNORD115-46-201ENST00000390982 71 ntBASIC1.77□□□□□ -2.13
SLC6A13Q9NSD5 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.77□□□□□ -2.13
SLC6A13Q9NSD5 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.77□□□□□ -2.13
SLC6A13Q9NSD5 AC003989.2-201ENST00000440224 169 ntBASIC1.77□□□□□ -2.13
SLC6A13Q9NSD5 snoU13.23-201ENST00000458863 104 ntBASIC1.77□□□□□ -2.13
SLC6A13Q9NSD5 snoU13.27-201ENST00000459278 104 ntBASIC1.77□□□□□ -2.13
SLC6A13Q9NSD5 AC010655.3-201ENST00000478818 450 ntBASIC1.77□□□□□ -2.13
SLC6A13Q9NSD5 AC025465.3-201ENST00000510570 311 ntBASIC1.77□□□□□ -2.13
SLC6A13Q9NSD5 RNU6-1337P-201ENST00000516525 95 ntBASIC1.77□□□□□ -2.13
SLC6A13Q9NSD5 MIR6079-201ENST00000635807 62 ntBASIC1.77□□□□□ -2.13
SLC6A13Q9NSD5 AL356292.1-201ENST00000283110 373 ntBASIC1.76□□□□□ -2.13
SLC6A13Q9NSD5 SNORD81.1-201ENST00000363064 77 ntBASIC1.76□□□□□ -2.13
SLC6A13Q9NSD5 SNORD113-8-201ENST00000363497 74 ntBASIC1.76□□□□□ -2.13
SLC6A13Q9NSD5 RNU6-1160P-201ENST00000384546 104 ntBASIC1.76□□□□□ -2.13
SLC6A13Q9NSD5 RPL21P1-201ENST00000399532 476 ntBASIC1.76□□□□□ -2.13
SLC6A13Q9NSD5 RNU6-710P-201ENST00000410424 105 ntBASIC1.76□□□□□ -2.13
SLC6A13Q9NSD5 AC113618.1-201ENST00000416747 285 ntBASIC1.76□□□□□ -2.13
SLC6A13Q9NSD5 AC245047.3-201ENST00000429428 127 ntBASIC1.76□□□□□ -2.13
SLC6A13Q9NSD5 FTH1P12-201ENST00000432137 551 ntBASIC1.76□□□□□ -2.13
SLC6A13Q9NSD5 AL591806.2-201ENST00000433122 173 ntBASIC1.76□□□□□ -2.13
SLC6A13Q9NSD5 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.76□□□□□ -2.13
SLC6A13Q9NSD5 RNU6-1143P-201ENST00000516125 104 ntBASIC1.76□□□□□ -2.13
SLC6A13Q9NSD5 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.76□□□□□ -2.13
SLC6A13Q9NSD5 DEFB122-202ENST00000569013 197 ntBASIC1.76□□□□□ -2.13
SLC6A13Q9NSD5 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.76□□□□□ -2.13
SLC6A13Q9NSD5 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.76□□□□□ -2.13
SLC6A13Q9NSD5 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SLC6A13Q9NSD5 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
SLC6A13Q9NSD5 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
SLC6A13Q9NSD5 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
SLC6A13Q9NSD5 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
SLC6A13Q9NSD5 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.75□□□□□ -2.13
SLC6A13Q9NSD5 Y_RNA.214-201ENST00000364201 112 ntBASIC1.75□□□□□ -2.13
SLC6A13Q9NSD5 SNORA16.1-201ENST00000364597 132 ntBASIC1.75□□□□□ -2.13
SLC6A13Q9NSD5 SNORA4.2-201ENST00000365313 147 ntBASIC1.75□□□□□ -2.13
SLC6A13Q9NSD5 RNU6-439P-201ENST00000384188 106 ntBASIC1.75□□□□□ -2.13
SLC6A13Q9NSD5 MIR562-201ENST00000384894 95 ntBASIC1.75□□□□□ -2.13
SLC6A13Q9NSD5 MIR764-201ENST00000390811 85 ntBASIC1.75□□□□□ -2.13
SLC6A13Q9NSD5 COX6CP10-201ENST00000416832 224 ntBASIC1.75□□□□□ -2.13
SLC6A13Q9NSD5 ELOCP20-201ENST00000422460 345 ntBASIC1.75□□□□□ -2.13
SLC6A13Q9NSD5 RPL31P63-201ENST00000422565 375 ntBASIC1.75□□□□□ -2.13
SLC6A13Q9NSD5 RPS29P11-201ENST00000496507 171 ntBASIC1.75□□□□□ -2.13
SLC6A13Q9NSD5 AC108210.2-201ENST00000503681 201 ntBASIC1.75□□□□□ -2.13
SLC6A13Q9NSD5 MRPS35P2-201ENST00000508242 191 ntBASIC1.75□□□□□ -2.13
SLC6A13Q9NSD5 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.75□□□□□ -2.13
SLC6A13Q9NSD5 AC015712.3-201ENST00000559380 164 ntBASIC1.75□□□□□ -2.13
SLC6A13Q9NSD5 AC091178.2-201ENST00000584401 117 ntBASIC1.75□□□□□ -2.13
SLC6A13Q9NSD5 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SLC6A13Q9NSD5 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SLC6A13Q9NSD5 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.74□□□□□ -2.13
SLC6A13Q9NSD5 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
SLC6A13Q9NSD5 Y_RNA.105-201ENST00000363182 111 ntBASIC1.74□□□□□ -2.13
SLC6A13Q9NSD5 RNU6-414P-201ENST00000363705 104 ntBASIC1.74□□□□□ -2.13
SLC6A13Q9NSD5 RNU6-770P-201ENST00000363929 105 ntBASIC1.74□□□□□ -2.13
SLC6A13Q9NSD5 Y_RNA.286-201ENST00000364813 102 ntBASIC1.74□□□□□ -2.13
SLC6A13Q9NSD5 SNORD48-201ENST00000364953 64 ntBASIC1.74□□□□□ -2.13
SLC6A13Q9NSD5 MIR520G-201ENST00000385064 90 ntBASIC1.74□□□□□ -2.13
SLC6A13Q9NSD5 RNU6-121P-201ENST00000410525 99 ntBASIC1.74□□□□□ -2.13
SLC6A13Q9NSD5 AC024067.1-201ENST00000426199 223 ntBASIC1.74□□□□□ -2.13
SLC6A13Q9NSD5 POLR2KP2-201ENST00000438155 177 ntBASIC1.74□□□□□ -2.13
SLC6A13Q9NSD5 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.74□□□□□ -2.13
SLC6A13Q9NSD5 AC091021.1-201ENST00000468051 388 ntBASIC1.74□□□□□ -2.13
SLC6A13Q9NSD5 RNU6-63P-201ENST00000516690 95 ntBASIC1.74□□□□□ -2.13
SLC6A13Q9NSD5 RNU6-341P-201ENST00000516973 96 ntBASIC1.74□□□□□ -2.13
SLC6A13Q9NSD5 MIR4709-201ENST00000577272 72 ntBASIC1.74□□□□□ -2.13
SLC6A13Q9NSD5 MIR8054-201ENST00000620877 86 ntBASIC1.74□□□□□ -2.13
SLC6A13Q9NSD5 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
SLC6A13Q9NSD5 RNU4-90P-201ENST00000362773 141 ntBASIC1.73□□□□□ -2.13
SLC6A13Q9NSD5 Y_RNA.222-201ENST00000364264 102 ntBASIC1.73□□□□□ -2.13
SLC6A13Q9NSD5 Y_RNA.383-201ENST00000383855 97 ntBASIC1.73□□□□□ -2.13
SLC6A13Q9NSD5 MIR606-201ENST00000384851 96 ntBASIC1.73□□□□□ -2.13
SLC6A13Q9NSD5 Y_RNA.581-201ENST00000391017 97 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms