Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 Y_RNA.387-201ENST00000383918 102 ntBASIC0.91□□□□□ -2.26
CCL28Q9NRJ3 MIR150-201ENST00000385048 84 ntBASIC0.91□□□□□ -2.26
CCL28Q9NRJ3 MIR628-201ENST00000385229 95 ntBASIC0.91□□□□□ -2.26
CCL28Q9NRJ3 RNY4P36-201ENST00000391116 96 ntBASIC0.91□□□□□ -2.26
CCL28Q9NRJ3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.91□□□□□ -2.26
CCL28Q9NRJ3 Y_RNA.605-201ENST00000410577 105 ntBASIC0.91□□□□□ -2.26
CCL28Q9NRJ3 AC099799.1-201ENST00000439809 192 ntBASIC0.91□□□□□ -2.26
CCL28Q9NRJ3 RPS29P28-201ENST00000446439 141 ntBASIC0.91□□□□□ -2.26
CCL28Q9NRJ3 ELOCP24-201ENST00000456370 334 ntBASIC0.91□□□□□ -2.26
CCL28Q9NRJ3 RNU7-169P-201ENST00000459456 61 ntBASIC0.91□□□□□ -2.26
CCL28Q9NRJ3 SNORA70.12-201ENST00000516084 153 ntBASIC0.91□□□□□ -2.26
CCL28Q9NRJ3 RNU6-277P-201ENST00000516272 106 ntBASIC0.91□□□□□ -2.26
CCL28Q9NRJ3 UBE2V2P2-201ENST00000587677 504 ntBASIC0.91□□□□□ -2.26
CCL28Q9NRJ3 AC006380.1-201ENST00000603598 186 ntBASIC0.91□□□□□ -2.26
CCL28Q9NRJ3 GHRLOS.1-201ENST00000610995 70 ntBASIC0.91□□□□□ -2.26
CCL28Q9NRJ3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 RNU6-490P-201ENST00000362985 107 ntBASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 RNY3P11-201ENST00000364153 102 ntBASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 Y_RNA.314-201ENST00000365114 102 ntBASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 MIR559-201ENST00000385188 96 ntBASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 MIR618-201ENST00000385287 98 ntBASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 SNORD41-201ENST00000386967 70 ntBASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 AL591806.2-201ENST00000433122 173 ntBASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 DYNLT3P2-201ENST00000442517 295 ntBASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 HSPE1P13-201ENST00000451143 297 ntBASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 AC009474.2-201ENST00000451383 136 ntBASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 AC233266.1-201ENST00000454518 96 ntBASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 RNU7-95P-201ENST00000459222 64 ntBASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 AL049830.1-201ENST00000468034 425 ntBASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 AL133373.1-201ENST00000497098 94 ntBASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 RNU6-322P-201ENST00000516010 103 ntBASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 RNU6-917P-201ENST00000516294 104 ntBASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 RNU6-911P-201ENST00000516523 104 ntBASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 RNU6-1012P-201ENST00000516606 109 ntBASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 RNU6-63P-201ENST00000516690 95 ntBASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 AC090049.2-201ENST00000550377 109 ntBASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 AC242852.1-201ENST00000612151 96 ntBASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 AC240442.1-201ENST00000616055 283 ntBASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 U2.1-201ENST00000618978 145 ntBASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 AC244015.1-201ENST00000622301 99 ntBASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 MTND4LP32-201ENST00000636111 270 ntBASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 MIR1302-1-201ENST00000637932 143 ntBASIC0.9□□□□□ -2.27
CCL28Q9NRJ3 MIRLET7C-201ENST00000362160 84 ntBASIC0.89□□□□□ -2.27
CCL28Q9NRJ3 SNORA2.2-201ENST00000365473 135 ntBASIC0.89□□□□□ -2.27
CCL28Q9NRJ3 Y_RNA.384-201ENST00000383909 102 ntBASIC0.89□□□□□ -2.27
CCL28Q9NRJ3 RNU6-1040P-201ENST00000383974 107 ntBASIC0.89□□□□□ -2.27
CCL28Q9NRJ3 SNORD116-29-201ENST00000384516 83 ntBASIC0.89□□□□□ -2.27
CCL28Q9NRJ3 RNU6-136P-201ENST00000384663 107 ntBASIC0.89□□□□□ -2.27
CCL28Q9NRJ3 AL451046.2-201ENST00000403074 277 ntBASIC0.89□□□□□ -2.27
CCL28Q9NRJ3 AL031003.1-201ENST00000404229 172 ntBASIC0.89□□□□□ -2.27
CCL28Q9NRJ3 RNU2-54P-201ENST00000410299 190 ntBASIC0.89□□□□□ -2.27
CCL28Q9NRJ3 AL354751.2-201ENST00000415471 210 ntBASIC0.89□□□□□ -2.27
CCL28Q9NRJ3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.89□□□□□ -2.27
CCL28Q9NRJ3 AL162725.1-201ENST00000435405 301 ntBASIC0.89□□□□□ -2.27
CCL28Q9NRJ3 RNU7-12P-201ENST00000516030 62 ntBASIC0.89□□□□□ -2.27
CCL28Q9NRJ3 RNU6-1337P-201ENST00000516525 95 ntBASIC0.89□□□□□ -2.27
CCL28Q9NRJ3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.89□□□□□ -2.27
CCL28Q9NRJ3 AC005730.3-201ENST00000583067 366 ntBASIC0.89□□□□□ -2.27
CCL28Q9NRJ3 AC005176.2-201ENST00000596933 147 ntBASIC0.89□□□□□ -2.27
CCL28Q9NRJ3 AL353770.2-201ENST00000620024 78 ntBASIC0.89□□□□□ -2.27
CCL28Q9NRJ3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
CCL28Q9NRJ3 Y_RNA.101-201ENST00000363154 102 ntBASIC0.88□□□□□ -2.27
CCL28Q9NRJ3 RNU4-41P-201ENST00000364426 143 ntBASIC0.88□□□□□ -2.27
CCL28Q9NRJ3 SNORA25-201ENST00000384384 134 ntBASIC0.88□□□□□ -2.27
CCL28Q9NRJ3 RNA5SP511-201ENST00000410487 115 ntBASIC0.88□□□□□ -2.27
CCL28Q9NRJ3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.88□□□□□ -2.27
CCL28Q9NRJ3 AC093850.1-201ENST00000454121 251 ntBASIC0.88□□□□□ -2.27
CCL28Q9NRJ3 RNU7-40P-201ENST00000516397 64 ntBASIC0.88□□□□□ -2.27
CCL28Q9NRJ3 AL117336.2-201ENST00000602435 335 ntBASIC0.88□□□□□ -2.27
CCL28Q9NRJ3 AL022345.2-201ENST00000606307 135 ntBASIC0.88□□□□□ -2.27
CCL28Q9NRJ3 AL132765.2-201ENST00000610812 351 ntBASIC0.88□□□□□ -2.27
CCL28Q9NRJ3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.88□□□□□ -2.27
CCL28Q9NRJ3 AC138305.3-201ENST00000624988 240 ntBASIC0.88□□□□□ -2.27
CCL28Q9NRJ3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.88□□□□□ -2.27
CCL28Q9NRJ3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
CCL28Q9NRJ3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
CCL28Q9NRJ3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
CCL28Q9NRJ3 Y_RNA.27-201ENST00000362540 103 ntBASIC0.87□□□□□ -2.27
CCL28Q9NRJ3 SNORA72.1-201ENST00000363485 129 ntBASIC0.87□□□□□ -2.27
CCL28Q9NRJ3 RNU6-939P-201ENST00000384634 107 ntBASIC0.87□□□□□ -2.27
CCL28Q9NRJ3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
CCL28Q9NRJ3 Z98949.2-201ENST00000440996 144 ntBASIC0.87□□□□□ -2.27
CCL28Q9NRJ3 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.87□□□□□ -2.27
CCL28Q9NRJ3 RPS4XP11-201ENST00000446897 772 ntBASIC0.87□□□□□ -2.27
CCL28Q9NRJ3 AL163540.1-201ENST00000485382 386 ntBASIC0.87□□□□□ -2.27
CCL28Q9NRJ3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.87□□□□□ -2.27
CCL28Q9NRJ3 SNORA31.2-201ENST00000516019 134 ntBASIC0.87□□□□□ -2.27
CCL28Q9NRJ3 RNU6-699P-201ENST00000517081 110 ntBASIC0.87□□□□□ -2.27
CCL28Q9NRJ3 Y_RNA.718-201ENST00000517110 102 ntBASIC0.87□□□□□ -2.27
CCL28Q9NRJ3 MIR4659A-201ENST00000580269 81 ntBASIC0.87□□□□□ -2.27
CCL28Q9NRJ3 AL357312.1-201ENST00000603879 298 ntBASIC0.87□□□□□ -2.27
CCL28Q9NRJ3 SNORD114-21-201ENST00000606412 72 ntBASIC0.87□□□□□ -2.27
CCL28Q9NRJ3 BX284668.6-201ENST00000606899 438 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 270.4 ms