Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 RNU6-926P-201ENST00000384075 107 ntBASIC1.32□□□□□ -2.2
RNF41Q9H4P4 MIR1267-201ENST00000408723 78 ntBASIC1.32□□□□□ -2.2
RNF41Q9H4P4 RNA5SP475-201ENST00000410568 110 ntBASIC1.32□□□□□ -2.2
RNF41Q9H4P4 RNU6-1199P-201ENST00000411249 104 ntBASIC1.32□□□□□ -2.2
RNF41Q9H4P4 MTCO3P19-201ENST00000415864 321 ntBASIC1.32□□□□□ -2.2
RNF41Q9H4P4 AC010154.1-201ENST00000425857 269 ntBASIC1.32□□□□□ -2.2
RNF41Q9H4P4 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.32□□□□□ -2.2
RNF41Q9H4P4 FTH1P12-201ENST00000432137 551 ntBASIC1.32□□□□□ -2.2
RNF41Q9H4P4 snoU13.9-201ENST00000458927 103 ntBASIC1.32□□□□□ -2.2
RNF41Q9H4P4 AC097462.1-201ENST00000514125 324 ntBASIC1.32□□□□□ -2.2
RNF41Q9H4P4 RNU6-966P-201ENST00000516479 104 ntBASIC1.32□□□□□ -2.2
RNF41Q9H4P4 RNU4-77P-201ENST00000516692 156 ntBASIC1.32□□□□□ -2.2
RNF41Q9H4P4 AL929325.1-201ENST00000603096 117 ntBASIC1.32□□□□□ -2.2
RNF41Q9H4P4 C8orf59P2-201ENST00000603441 271 ntBASIC1.32□□□□□ -2.2
RNF41Q9H4P4 AC091895.1-201ENST00000624494 256 ntBASIC1.32□□□□□ -2.2
RNF41Q9H4P4 AC100821.1-201ENST00000523153 2479 ntBASIC1.32□□□□□ -2.2
RNF41Q9H4P4 Y_RNA.124-201ENST00000363339 93 ntBASIC1.31□□□□□ -2.2
RNF41Q9H4P4 SNORD1A-201ENST00000364968 72 ntBASIC1.31□□□□□ -2.2
RNF41Q9H4P4 Y_RNA.428-201ENST00000384078 102 ntBASIC1.31□□□□□ -2.2
RNF41Q9H4P4 RNU6-1310P-201ENST00000384153 107 ntBASIC1.31□□□□□ -2.2
RNF41Q9H4P4 Y_RNA.509-201ENST00000384506 99 ntBASIC1.31□□□□□ -2.2
RNF41Q9H4P4 MT-TD-201ENST00000387419 68 ntBASIC1.31□□□□□ -2.2
RNF41Q9H4P4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.31□□□□□ -2.2
RNF41Q9H4P4 RNU6-440P-201ENST00000390882 105 ntBASIC1.31□□□□□ -2.2
RNF41Q9H4P4 Y_RNA.579-201ENST00000390939 94 ntBASIC1.31□□□□□ -2.2
RNF41Q9H4P4 MRPL42P3-201ENST00000401492 326 ntBASIC1.31□□□□□ -2.2
RNF41Q9H4P4 MRPL35P1-201ENST00000404272 572 ntBASIC1.31□□□□□ -2.2
RNF41Q9H4P4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.31□□□□□ -2.2
RNF41Q9H4P4 AC236972.2-201ENST00000434979 310 ntBASIC1.31□□□□□ -2.2
RNF41Q9H4P4 AL137792.2-201ENST00000443484 235 ntBASIC1.31□□□□□ -2.2
RNF41Q9H4P4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.31□□□□□ -2.2
RNF41Q9H4P4 RNA5SP20-201ENST00000515976 84 ntBASIC1.31□□□□□ -2.2
RNF41Q9H4P4 SNORD116.3-201ENST00000517176 78 ntBASIC1.31□□□□□ -2.2
RNF41Q9H4P4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.31□□□□□ -2.2
RNF41Q9H4P4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.31□□□□□ -2.2
RNF41Q9H4P4 AC008269.2-201ENST00000561915 1105 ntBASIC1.31□□□□□ -2.2
RNF41Q9H4P4 MIR4709-201ENST00000577272 72 ntBASIC1.31□□□□□ -2.2
RNF41Q9H4P4 AC091178.2-201ENST00000584401 117 ntBASIC1.31□□□□□ -2.2
RNF41Q9H4P4 MIR4295-201ENST00000585286 85 ntBASIC1.31□□□□□ -2.2
RNF41Q9H4P4 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.31□□□□□ -2.2
RNF41Q9H4P4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
RNF41Q9H4P4 AC018630.2-201ENST00000534866 2403 ntBASIC1.3□□□□□ -2.2
RNF41Q9H4P4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
RNF41Q9H4P4 SNORD114-7-201ENST00000362520 77 ntBASIC1.3□□□□□ -2.2
RNF41Q9H4P4 Y_RNA.27-201ENST00000362540 103 ntBASIC1.3□□□□□ -2.2
RNF41Q9H4P4 Y_RNA.197-201ENST00000364004 102 ntBASIC1.3□□□□□ -2.2
RNF41Q9H4P4 SNORD115-30-201ENST00000364117 82 ntBASIC1.3□□□□□ -2.2
RNF41Q9H4P4 RNU6-1031P-201ENST00000384773 107 ntBASIC1.3□□□□□ -2.2
RNF41Q9H4P4 FCF1P4-201ENST00000448326 183 ntBASIC1.3□□□□□ -2.2
RNF41Q9H4P4 RNU7-172P-201ENST00000517125 64 ntBASIC1.3□□□□□ -2.2
RNF41Q9H4P4 AC023442.1-201ENST00000531247 422 ntBASIC1.3□□□□□ -2.2
RNF41Q9H4P4 MIR4659A-201ENST00000580269 81 ntBASIC1.3□□□□□ -2.2
RNF41Q9H4P4 VN1R91P-201ENST00000594377 169 ntBASIC1.3□□□□□ -2.2
RNF41Q9H4P4 AC092447.9-201ENST00000603395 144 ntBASIC1.3□□□□□ -2.2
RNF41Q9H4P4 AP001485.1-201ENST00000604799 199 ntBASIC1.3□□□□□ -2.2
RNF41Q9H4P4 AL133255.1-201ENST00000606374 441 ntBASIC1.3□□□□□ -2.2
RNF41Q9H4P4 SNORD58B-201ENST00000607313 66 ntBASIC1.3□□□□□ -2.2
RNF41Q9H4P4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.3□□□□□ -2.2
RNF41Q9H4P4 AC021506.2-201ENST00000612354 169 ntBASIC1.3□□□□□ -2.2
RNF41Q9H4P4 AC011476.5-201ENST00000615594 130 ntBASIC1.3□□□□□ -2.2
RNF41Q9H4P4 AC240442.1-201ENST00000616055 283 ntBASIC1.3□□□□□ -2.2
RNF41Q9H4P4 U6.92-201ENST00000636464 89 ntBASIC1.3□□□□□ -2.2
RNF41Q9H4P4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
RNF41Q9H4P4 MIR337-201ENST00000362281 93 ntBASIC1.29□□□□□ -2.2
RNF41Q9H4P4 RNU6-626P-201ENST00000363354 107 ntBASIC1.29□□□□□ -2.2
RNF41Q9H4P4 RNU1-115P-201ENST00000365329 160 ntBASIC1.29□□□□□ -2.2
RNF41Q9H4P4 Y_RNA.395-201ENST00000383945 109 ntBASIC1.29□□□□□ -2.2
RNF41Q9H4P4 RNU6-20P-201ENST00000384106 107 ntBASIC1.29□□□□□ -2.2
RNF41Q9H4P4 MIR873-201ENST00000401120 77 ntBASIC1.29□□□□□ -2.2
RNF41Q9H4P4 COX6CP10-201ENST00000416832 224 ntBASIC1.29□□□□□ -2.2
RNF41Q9H4P4 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.29□□□□□ -2.2
RNF41Q9H4P4 SDAD1P3-201ENST00000427380 333 ntBASIC1.29□□□□□ -2.2
RNF41Q9H4P4 AC087343.1-201ENST00000477341 475 ntBASIC1.29□□□□□ -2.2
RNF41Q9H4P4 RNU6-976P-201ENST00000516086 111 ntBASIC1.29□□□□□ -2.2
RNF41Q9H4P4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.29□□□□□ -2.2
RNF41Q9H4P4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.29□□□□□ -2.2
RNF41Q9H4P4 AC006600.1-201ENST00000572529 153 ntBASIC1.29□□□□□ -2.2
RNF41Q9H4P4 MIR5188-201ENST00000583467 113 ntBASIC1.29□□□□□ -2.2
RNF41Q9H4P4 AC010205.1-201ENST00000616668 449 ntBASIC1.29□□□□□ -2.2
RNF41Q9H4P4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.29□□□□□ -2.2
RNF41Q9H4P4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.28□□□□□ -2.2
RNF41Q9H4P4 ICE2P2-201ENST00000483823 2787 ntBASIC1.28□□□□□ -2.2
RNF41Q9H4P4 Y_RNA.80-201ENST00000362996 102 ntBASIC1.28□□□□□ -2.2
RNF41Q9H4P4 Y_RNA.112-201ENST00000363250 102 ntBASIC1.28□□□□□ -2.2
RNF41Q9H4P4 Y_RNA.485-201ENST00000384395 102 ntBASIC1.28□□□□□ -2.2
RNF41Q9H4P4 SNORD78.2-201ENST00000391076 69 ntBASIC1.28□□□□□ -2.2
RNF41Q9H4P4 RNU2-54P-201ENST00000410299 190 ntBASIC1.28□□□□□ -2.2
RNF41Q9H4P4 RNU5A-5P-201ENST00000411054 116 ntBASIC1.28□□□□□ -2.2
RNF41Q9H4P4 AC245047.3-201ENST00000429428 127 ntBASIC1.28□□□□□ -2.2
RNF41Q9H4P4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.28□□□□□ -2.2
RNF41Q9H4P4 RPS26P55-201ENST00000471178 356 ntBASIC1.28□□□□□ -2.2
RNF41Q9H4P4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.28□□□□□ -2.2
RNF41Q9H4P4 PRR13P7-201ENST00000605538 430 ntBASIC1.28□□□□□ -2.2
RNF41Q9H4P4 AL080274.1-201ENST00000605565 220 ntBASIC1.28□□□□□ -2.2
RNF41Q9H4P4 AL050343.2-201ENST00000607338 280 ntBASIC1.28□□□□□ -2.2
RNF41Q9H4P4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.28□□□□□ -2.2
RNF41Q9H4P4 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.28□□□□□ -2.2
RNF41Q9H4P4 uc_338.22-201ENST00000622722 187 ntBASIC1.28□□□□□ -2.2
RNF41Q9H4P4 MIR6079-201ENST00000635807 62 ntBASIC1.28□□□□□ -2.2
RNF41Q9H4P4 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms