Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 SNORA11.4-201ENST00000408823 129 ntBASIC2.34□□□□□ -2.03
VRK1Q99986 AC011753.1-201ENST00000451001 220 ntBASIC2.34□□□□□ -2.03
VRK1Q99986 RPS26P45-201ENST00000471748 340 ntBASIC2.34□□□□□ -2.03
VRK1Q99986 RNU6-138P-201ENST00000515952 107 ntBASIC2.34□□□□□ -2.03
VRK1Q99986 MIR548AY-201ENST00000617669 107 ntBASIC2.34□□□□□ -2.03
VRK1Q99986 AL365265.1-201ENST00000621045 234 ntBASIC2.34□□□□□ -2.03
VRK1Q99986 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.34□□□□□ -2.04
VRK1Q99986 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
VRK1Q99986 SNORA3A-201ENST00000364113 130 ntBASIC2.33□□□□□ -2.04
VRK1Q99986 RNU6-376P-201ENST00000384731 106 ntBASIC2.33□□□□□ -2.04
VRK1Q99986 MTCO2P33-201ENST00000402100 465 ntBASIC2.33□□□□□ -2.04
VRK1Q99986 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.33□□□□□ -2.04
VRK1Q99986 HMGN2P3-201ENST00000433603 273 ntBASIC2.33□□□□□ -2.04
VRK1Q99986 HMGN2P5-201ENST00000436882 273 ntBASIC2.33□□□□□ -2.04
VRK1Q99986 AC108938.1-201ENST00000451204 136 ntBASIC2.33□□□□□ -2.04
VRK1Q99986 AC096725.1-201ENST00000514266 313 ntBASIC2.33□□□□□ -2.04
VRK1Q99986 SNORA31.25-201ENST00000517242 134 ntBASIC2.33□□□□□ -2.04
VRK1Q99986 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.33□□□□□ -2.04
VRK1Q99986 MIR5688-201ENST00000580619 83 ntBASIC2.33□□□□□ -2.04
VRK1Q99986 MIR3162-201ENST00000581818 82 ntBASIC2.33□□□□□ -2.04
VRK1Q99986 MIR4672-201ENST00000583126 81 ntBASIC2.33□□□□□ -2.04
VRK1Q99986 POLR3GP1-201ENST00000594073 261 ntBASIC2.33□□□□□ -2.04
VRK1Q99986 AC245884.12-201ENST00000615364 59 ntBASIC2.33□□□□□ -2.04
VRK1Q99986 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.33□□□□□ -2.04
VRK1Q99986 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VRK1Q99986 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
VRK1Q99986 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VRK1Q99986 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.32□□□□□ -2.04
VRK1Q99986 MIR6073-201ENST00000352083 89 ntBASIC2.32□□□□□ -2.04
VRK1Q99986 MIR411-201ENST00000362239 96 ntBASIC2.32□□□□□ -2.04
VRK1Q99986 RNU4-13P-201ENST00000364019 141 ntBASIC2.32□□□□□ -2.04
VRK1Q99986 Y_RNA.262-201ENST00000364641 102 ntBASIC2.32□□□□□ -2.04
VRK1Q99986 Y_RNA.274-201ENST00000364714 101 ntBASIC2.32□□□□□ -2.04
VRK1Q99986 Y_RNA.297-201ENST00000364950 91 ntBASIC2.32□□□□□ -2.04
VRK1Q99986 MIR520G-201ENST00000385064 90 ntBASIC2.32□□□□□ -2.04
VRK1Q99986 RNA5SP181-201ENST00000410246 98 ntBASIC2.32□□□□□ -2.04
VRK1Q99986 RNA5SP21-201ENST00000410917 96 ntBASIC2.32□□□□□ -2.04
VRK1Q99986 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.32□□□□□ -2.04
VRK1Q99986 AC003982.1-202ENST00000469928 248 ntBASIC2.32□□□□□ -2.04
VRK1Q99986 AC117454.1-201ENST00000491120 168 ntBASIC2.32□□□□□ -2.04
VRK1Q99986 IGLV3-17-201ENST00000519099 244 ntBASIC2.32□□□□□ -2.04
VRK1Q99986 AC024405.2-202ENST00000532731 184 ntBASIC2.32□□□□□ -2.04
VRK1Q99986 AC121758.2-201ENST00000553271 193 ntBASIC2.32□□□□□ -2.04
VRK1Q99986 AC127455.1-201ENST00000565496 145 ntBASIC2.32□□□□□ -2.04
VRK1Q99986 Z83818.1-201ENST00000603584 150 ntBASIC2.32□□□□□ -2.04
VRK1Q99986 AC073413.2-201ENST00000604332 360 ntBASIC2.32□□□□□ -2.04
VRK1Q99986 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.32□□□□□ -2.04
VRK1Q99986 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.32□□□□□ -2.04
VRK1Q99986 AC134026.1-201ENST00000623249 2239 ntBASIC2.32□□□□□ -2.04
VRK1Q99986 RNU6-653P-201ENST00000363074 106 ntBASIC2.31□□□□□ -2.04
VRK1Q99986 SNORA33-201ENST00000363664 130 ntBASIC2.31□□□□□ -2.04
VRK1Q99986 SNORA72-201ENST00000384339 132 ntBASIC2.31□□□□□ -2.04
VRK1Q99986 MIR144-201ENST00000384886 86 ntBASIC2.31□□□□□ -2.04
VRK1Q99986 MIR597-201ENST00000384968 97 ntBASIC2.31□□□□□ -2.04
VRK1Q99986 MIR9-1-201ENST00000385198 89 ntBASIC2.31□□□□□ -2.04
VRK1Q99986 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
VRK1Q99986 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
VRK1Q99986 RNA5SP323-201ENST00000391094 133 ntBASIC2.31□□□□□ -2.04
VRK1Q99986 RNU2-64P-201ENST00000411315 191 ntBASIC2.31□□□□□ -2.04
VRK1Q99986 AL138752.1-201ENST00000452964 351 ntBASIC2.31□□□□□ -2.04
VRK1Q99986 RNU7-94P-201ENST00000459576 63 ntBASIC2.31□□□□□ -2.04
VRK1Q99986 AC091178.2-201ENST00000584401 117 ntBASIC2.31□□□□□ -2.04
VRK1Q99986 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.31□□□□□ -2.04
VRK1Q99986 MIR6895-201ENST00000613497 78 ntBASIC2.31□□□□□ -2.04
VRK1Q99986 MIR203B-201ENST00000636080 86 ntBASIC2.31□□□□□ -2.04
VRK1Q99986 AC018630.2-201ENST00000534866 2403 ntBASIC2.31□□□□□ -2.04
VRK1Q99986 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VRK1Q99986 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
VRK1Q99986 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
VRK1Q99986 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
VRK1Q99986 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
VRK1Q99986 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VRK1Q99986 RNU6-1205P-201ENST00000363625 106 ntBASIC2.3□□□□□ -2.04
VRK1Q99986 RNU6-1019P-201ENST00000364424 107 ntBASIC2.3□□□□□ -2.04
VRK1Q99986 SNORA8-201ENST00000384574 139 ntBASIC2.3□□□□□ -2.04
VRK1Q99986 MIR562-201ENST00000384894 95 ntBASIC2.3□□□□□ -2.04
VRK1Q99986 MIR526A2-201ENST00000390198 65 ntBASIC2.3□□□□□ -2.04
VRK1Q99986 SNORA36B-201ENST00000410438 131 ntBASIC2.3□□□□□ -2.04
VRK1Q99986 MTND2P29-201ENST00000438595 412 ntBASIC2.3□□□□□ -2.04
VRK1Q99986 RNU7-193P-201ENST00000516723 65 ntBASIC2.3□□□□□ -2.04
VRK1Q99986 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.3□□□□□ -2.04
VRK1Q99986 MIR4529-201ENST00000578110 78 ntBASIC2.3□□□□□ -2.04
VRK1Q99986 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.3□□□□□ -2.04
VRK1Q99986 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.3□□□□□ -2.04
VRK1Q99986 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.3□□□□□ -2.04
VRK1Q99986 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
VRK1Q99986 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VRK1Q99986 Y_RNA.29-201ENST00000362570 113 ntBASIC2.29□□□□□ -2.04
VRK1Q99986 RNU6-136P-201ENST00000384663 107 ntBASIC2.29□□□□□ -2.04
VRK1Q99986 SNORA48.1-201ENST00000390879 135 ntBASIC2.29□□□□□ -2.04
VRK1Q99986 RPS12P2-201ENST00000439728 269 ntBASIC2.29□□□□□ -2.04
VRK1Q99986 RPS4XP11-201ENST00000446897 772 ntBASIC2.29□□□□□ -2.04
VRK1Q99986 Y_RNA.644-201ENST00000459006 113 ntBASIC2.29□□□□□ -2.04
VRK1Q99986 AL163195.1-201ENST00000496941 348 ntBASIC2.29□□□□□ -2.04
VRK1Q99986 Y_RNA.674-201ENST00000516362 113 ntBASIC2.29□□□□□ -2.04
VRK1Q99986 RNA5SP402-201ENST00000517148 110 ntBASIC2.29□□□□□ -2.04
VRK1Q99986 AC100767.1-201ENST00000528178 123 ntBASIC2.29□□□□□ -2.04
VRK1Q99986 CBX3P4-201ENST00000538909 354 ntBASIC2.29□□□□□ -2.04
VRK1Q99986 MIR4435-1-201ENST00000582552 80 ntBASIC2.29□□□□□ -2.04
VRK1Q99986 AC069114.2-201ENST00000604699 304 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms