Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CDCA3Q99618 RNU6-997P-201ENST00000384725 107 ntBASIC1.55□□□□□ -2.16
CDCA3Q99618 RNA5SP109-201ENST00000391010 116 ntBASIC1.55□□□□□ -2.16
CDCA3Q99618 RPL21P1-201ENST00000399532 476 ntBASIC1.55□□□□□ -2.16
CDCA3Q99618 MRPL35P1-201ENST00000404272 572 ntBASIC1.55□□□□□ -2.16
CDCA3Q99618 MCFD2P1-201ENST00000417812 300 ntBASIC1.55□□□□□ -2.16
CDCA3Q99618 AL354695.1-201ENST00000427935 228 ntBASIC1.55□□□□□ -2.16
CDCA3Q99618 MTND4P19-201ENST00000446659 478 ntBASIC1.55□□□□□ -2.16
CDCA3Q99618 RNU7-99P-201ENST00000516271 62 ntBASIC1.55□□□□□ -2.16
CDCA3Q99618 MIR3684-201ENST00000579779 74 ntBASIC1.55□□□□□ -2.16
CDCA3Q99618 AC005176.2-201ENST00000596933 147 ntBASIC1.55□□□□□ -2.16
CDCA3Q99618 MIR6078-201ENST00000611069 100 ntBASIC1.55□□□□□ -2.16
CDCA3Q99618 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.55□□□□□ -2.16
CDCA3Q99618 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.55□□□□□ -2.16
CDCA3Q99618 AC006435.5-201ENST00000624486 112 ntBASIC1.55□□□□□ -2.16
CDCA3Q99618 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CDCA3Q99618 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CDCA3Q99618 Y_RNA.101-201ENST00000363154 102 ntBASIC1.54□□□□□ -2.16
CDCA3Q99618 SNORA4.2-201ENST00000365313 147 ntBASIC1.54□□□□□ -2.16
CDCA3Q99618 RNU6-42P-201ENST00000384165 107 ntBASIC1.54□□□□□ -2.16
CDCA3Q99618 Y_RNA.458-201ENST00000384240 102 ntBASIC1.54□□□□□ -2.16
CDCA3Q99618 RNU6-360P-201ENST00000390944 104 ntBASIC1.54□□□□□ -2.16
CDCA3Q99618 PMCHL1-202ENST00000423102 261 ntBASIC1.54□□□□□ -2.16
CDCA3Q99618 SDAD1P3-201ENST00000427380 333 ntBASIC1.54□□□□□ -2.16
CDCA3Q99618 AL606517.2-201ENST00000442855 241 ntBASIC1.54□□□□□ -2.16
CDCA3Q99618 MRPS10P1-201ENST00000448483 130 ntBASIC1.54□□□□□ -2.16
CDCA3Q99618 RNA5SP20-201ENST00000515976 84 ntBASIC1.54□□□□□ -2.16
CDCA3Q99618 RNU6-970P-201ENST00000516312 107 ntBASIC1.54□□□□□ -2.16
CDCA3Q99618 RNU7-128P-201ENST00000517247 62 ntBASIC1.54□□□□□ -2.16
CDCA3Q99618 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.54□□□□□ -2.16
CDCA3Q99618 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.54□□□□□ -2.16
CDCA3Q99618 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
CDCA3Q99618 SNORA27.1-201ENST00000362604 124 ntBASIC1.53□□□□□ -2.16
CDCA3Q99618 Y_RNA.128-201ENST00000363391 112 ntBASIC1.53□□□□□ -2.16
CDCA3Q99618 Y_RNA.138-201ENST00000363462 102 ntBASIC1.53□□□□□ -2.16
CDCA3Q99618 Y_RNA.243-201ENST00000364481 109 ntBASIC1.53□□□□□ -2.16
CDCA3Q99618 SNORD14.1-201ENST00000365609 90 ntBASIC1.53□□□□□ -2.16
CDCA3Q99618 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
CDCA3Q99618 Y_RNA.631-201ENST00000459607 101 ntBASIC1.53□□□□□ -2.16
CDCA3Q99618 SNORA25.10-201ENST00000515926 124 ntBASIC1.53□□□□□ -2.16
CDCA3Q99618 RNA5SP481-201ENST00000516814 122 ntBASIC1.53□□□□□ -2.16
CDCA3Q99618 RNU7-172P-201ENST00000517125 64 ntBASIC1.53□□□□□ -2.16
CDCA3Q99618 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CDCA3Q99618 AC005592.1-201ENST00000566527 1640 ntBASIC1.53□□□□□ -2.16
CDCA3Q99618 AC006380.1-201ENST00000603598 186 ntBASIC1.53□□□□□ -2.16
CDCA3Q99618 AC091895.1-201ENST00000624494 256 ntBASIC1.53□□□□□ -2.16
CDCA3Q99618 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.53□□□□□ -2.17
CDCA3Q99618 U8.1-201ENST00000362843 134 ntBASIC1.52□□□□□ -2.17
CDCA3Q99618 RNU6-414P-201ENST00000363705 104 ntBASIC1.52□□□□□ -2.17
CDCA3Q99618 Y_RNA.424-201ENST00000384063 103 ntBASIC1.52□□□□□ -2.17
CDCA3Q99618 MIR1302-11-201ENST00000408051 138 ntBASIC1.52□□□□□ -2.17
CDCA3Q99618 MIR1302-9-201ENST00000408365 138 ntBASIC1.52□□□□□ -2.17
CDCA3Q99618 MIR1302-10-201ENST00000408734 138 ntBASIC1.52□□□□□ -2.17
CDCA3Q99618 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.52□□□□□ -2.17
CDCA3Q99618 MTCO2P12-201ENST00000427426 682 ntBASIC1.52□□□□□ -2.17
CDCA3Q99618 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.52□□□□□ -2.17
CDCA3Q99618 AC097462.1-201ENST00000514125 324 ntBASIC1.52□□□□□ -2.17
CDCA3Q99618 RNA5SP220-201ENST00000516298 104 ntBASIC1.52□□□□□ -2.17
CDCA3Q99618 RNU2-12P-201ENST00000517216 168 ntBASIC1.52□□□□□ -2.17
CDCA3Q99618 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.52□□□□□ -2.17
CDCA3Q99618 AC040926.1-201ENST00000530195 238 ntBASIC1.52□□□□□ -2.17
CDCA3Q99618 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.52□□□□□ -2.17
CDCA3Q99618 AC136443.5-201ENST00000603741 370 ntBASIC1.52□□□□□ -2.17
CDCA3Q99618 AC073413.2-201ENST00000604332 360 ntBASIC1.52□□□□□ -2.17
CDCA3Q99618 AC022217.4-201ENST00000604389 163 ntBASIC1.52□□□□□ -2.17
CDCA3Q99618 Y_RNA.772-201ENST00000606692 102 ntBASIC1.52□□□□□ -2.17
CDCA3Q99618 MIR1302-2-201ENST00000607096 138 ntBASIC1.52□□□□□ -2.17
CDCA3Q99618 MIR8074-201ENST00000615081 81 ntBASIC1.52□□□□□ -2.17
CDCA3Q99618 AC010205.1-201ENST00000616668 449 ntBASIC1.52□□□□□ -2.17
CDCA3Q99618 AC134503.1-201ENST00000633048 54 ntBASIC1.52□□□□□ -2.17
CDCA3Q99618 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.52□□□□□ -2.17
CDCA3Q99618 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
CDCA3Q99618 Y_RNA.28-201ENST00000362554 111 ntBASIC1.51□□□□□ -2.17
CDCA3Q99618 RNU1-22P-201ENST00000363334 158 ntBASIC1.51□□□□□ -2.17
CDCA3Q99618 Y_RNA.124-201ENST00000363339 93 ntBASIC1.51□□□□□ -2.17
CDCA3Q99618 RNU6-271P-201ENST00000363858 105 ntBASIC1.51□□□□□ -2.17
CDCA3Q99618 Y_RNA.446-201ENST00000384178 104 ntBASIC1.51□□□□□ -2.17
CDCA3Q99618 MIR1304-201ENST00000408243 91 ntBASIC1.51□□□□□ -2.17
CDCA3Q99618 RNU2-54P-201ENST00000410299 190 ntBASIC1.51□□□□□ -2.17
CDCA3Q99618 COX6CP10-201ENST00000416832 224 ntBASIC1.51□□□□□ -2.17
CDCA3Q99618 AC010154.1-201ENST00000425857 269 ntBASIC1.51□□□□□ -2.17
CDCA3Q99618 HSPE1P21-201ENST00000438283 308 ntBASIC1.51□□□□□ -2.17
CDCA3Q99618 RPS27P1-201ENST00000450552 247 ntBASIC1.51□□□□□ -2.17
CDCA3Q99618 AC112492.4-201ENST00000456549 352 ntBASIC1.51□□□□□ -2.17
CDCA3Q99618 snoU13.27-201ENST00000459278 104 ntBASIC1.51□□□□□ -2.17
CDCA3Q99618 RPS26P45-201ENST00000471748 340 ntBASIC1.51□□□□□ -2.17
CDCA3Q99618 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.51□□□□□ -2.17
CDCA3Q99618 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.51□□□□□ -2.17
CDCA3Q99618 AL078603.1-201ENST00000603824 313 ntBASIC1.51□□□□□ -2.17
CDCA3Q99618 AL121655.1-201ENST00000605811 308 ntBASIC1.51□□□□□ -2.17
CDCA3Q99618 AC005828.6-201ENST00000606610 232 ntBASIC1.51□□□□□ -2.17
CDCA3Q99618 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.51□□□□□ -2.17
CDCA3Q99618 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.51□□□□□ -2.17
CDCA3Q99618 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CDCA3Q99618 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
CDCA3Q99618 Y_RNA.148-201ENST00000363557 117 ntBASIC1.5□□□□□ -2.17
CDCA3Q99618 RNU6-324P-201ENST00000363957 106 ntBASIC1.5□□□□□ -2.17
CDCA3Q99618 SNORD115-30-201ENST00000364117 82 ntBASIC1.5□□□□□ -2.17
CDCA3Q99618 Y_RNA.230-201ENST00000364348 109 ntBASIC1.5□□□□□ -2.17
CDCA3Q99618 Y_RNA.471-201ENST00000384312 102 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 233.5 ms