Protein–RNA interactions for Protein: Q96NT0

CCDC115, Coiled-coil domain-containing protein 115, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115Q96NT0 RNU7-102P-201ENST00000458948 62 ntBASIC-0.69□□□□□ -2.52
CCDC115Q96NT0 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.69□□□□□ -2.52
CCDC115Q96NT0 AC091304.9-201ENST00000612091 226 ntBASIC-0.69□□□□□ -2.52
CCDC115Q96NT0 MIR548AZ-201ENST00000616567 95 ntBASIC-0.69□□□□□ -2.52
CCDC115Q96NT0 RNU6-501P-201ENST00000364072 100 ntBASIC-0.7□□□□□ -2.52
CCDC115Q96NT0 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.7□□□□□ -2.52
CCDC115Q96NT0 SNORA32.3-201ENST00000384772 121 ntBASIC-0.7□□□□□ -2.52
CCDC115Q96NT0 MTCO2P33-201ENST00000402100 465 ntBASIC-0.7□□□□□ -2.52
CCDC115Q96NT0 MTCO2P11-201ENST00000431069 680 ntBASIC-0.7□□□□□ -2.52
CCDC115Q96NT0 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.7□□□□□ -2.52
CCDC115Q96NT0 MTND1P17-201ENST00000448961 204 ntBASIC-0.7□□□□□ -2.52
CCDC115Q96NT0 SNORA14.1-201ENST00000516113 141 ntBASIC-0.7□□□□□ -2.52
CCDC115Q96NT0 AC022878.1-201ENST00000530684 149 ntBASIC-0.7□□□□□ -2.52
CCDC115Q96NT0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.7□□□□□ -2.52
CCDC115Q96NT0 AC100830.2-201ENST00000581636 240 ntBASIC-0.7□□□□□ -2.52
CCDC115Q96NT0 MIR548AR-201ENST00000582191 57 ntBASIC-0.7□□□□□ -2.52
CCDC115Q96NT0 U2.17-201ENST00000611454 95 ntBASIC-0.7□□□□□ -2.52
CCDC115Q96NT0 MIR7107-201ENST00000611489 80 ntBASIC-0.7□□□□□ -2.52
CCDC115Q96NT0 MIR499B-201ENST00000636498 73 ntBASIC-0.7□□□□□ -2.52
CCDC115Q96NT0 SNORA27.1-201ENST00000362604 124 ntBASIC-0.71□□□□□ -2.52
CCDC115Q96NT0 RNU6-46P-201ENST00000383860 107 ntBASIC-0.71□□□□□ -2.52
CCDC115Q96NT0 RNU6-187P-201ENST00000384139 106 ntBASIC-0.71□□□□□ -2.52
CCDC115Q96NT0 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.71□□□□□ -2.52
CCDC115Q96NT0 AL365184.2-201ENST00000431139 435 ntBASIC-0.71□□□□□ -2.52
CCDC115Q96NT0 AL137792.2-201ENST00000443484 235 ntBASIC-0.71□□□□□ -2.52
CCDC115Q96NT0 AC091179.3-201ENST00000474761 144 ntBASIC-0.71□□□□□ -2.52
CCDC115Q96NT0 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.71□□□□□ -2.52
CCDC115Q96NT0 AC018710.1-201ENST00000506509 158 ntBASIC-0.71□□□□□ -2.52
CCDC115Q96NT0 MIR4264-201ENST00000583520 66 ntBASIC-0.71□□□□□ -2.52
CCDC115Q96NT0 AL158211.2-201ENST00000607282 395 ntBASIC-0.71□□□□□ -2.52
CCDC115Q96NT0 AL591926.4-201ENST00000616895 298 ntBASIC-0.71□□□□□ -2.52
CCDC115Q96NT0 RNU4-73P-201ENST00000363164 141 ntBASIC-0.72□□□□□ -2.52
CCDC115Q96NT0 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.72□□□□□ -2.52
CCDC115Q96NT0 RNU6-873P-201ENST00000363833 107 ntBASIC-0.72□□□□□ -2.52
CCDC115Q96NT0 MIR604-201ENST00000384880 94 ntBASIC-0.72□□□□□ -2.52
CCDC115Q96NT0 SNORD28B-201ENST00000390993 75 ntBASIC-0.72□□□□□ -2.52
CCDC115Q96NT0 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.72□□□□□ -2.52
CCDC115Q96NT0 RNU2-72P-201ENST00000411175 163 ntBASIC-0.72□□□□□ -2.52
CCDC115Q96NT0 USP9YP25-201ENST00000457708 443 ntBASIC-0.72□□□□□ -2.52
CCDC115Q96NT0 AC091144.1-201ENST00000519573 138 ntBASIC-0.72□□□□□ -2.52
CCDC115Q96NT0 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.72□□□□□ -2.52
CCDC115Q96NT0 AC127459.3-201ENST00000624328 466 ntBASIC-0.72□□□□□ -2.52
CCDC115Q96NT0 SNORD38B-202ENST00000625943 69 ntBASIC-0.72□□□□□ -2.52
CCDC115Q96NT0 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.73□□□□□ -2.53
CCDC115Q96NT0 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.73□□□□□ -2.53
CCDC115Q96NT0 SNORD14C-201ENST00000365382 88 ntBASIC-0.73□□□□□ -2.53
CCDC115Q96NT0 RNU6-652P-201ENST00000365488 107 ntBASIC-0.73□□□□□ -2.53
CCDC115Q96NT0 RNU6-784P-201ENST00000384330 106 ntBASIC-0.73□□□□□ -2.53
CCDC115Q96NT0 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.73□□□□□ -2.53
CCDC115Q96NT0 USP9YP12-201ENST00000450481 570 ntBASIC-0.73□□□□□ -2.53
CCDC115Q96NT0 RNU6-448P-201ENST00000517052 107 ntBASIC-0.73□□□□□ -2.53
CCDC115Q96NT0 SCOCP1-201ENST00000554676 349 ntBASIC-0.73□□□□□ -2.53
CCDC115Q96NT0 AC027807.2-201ENST00000616099 408 ntBASIC-0.73□□□□□ -2.53
CCDC115Q96NT0 RNU6-117P-201ENST00000365415 107 ntBASIC-0.74□□□□□ -2.53
CCDC115Q96NT0 RNU6-35P-201ENST00000384530 107 ntBASIC-0.74□□□□□ -2.53
CCDC115Q96NT0 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.74□□□□□ -2.53
CCDC115Q96NT0 MIR125B2-201ENST00000385128 89 ntBASIC-0.74□□□□□ -2.53
CCDC115Q96NT0 MTCYBP4-201ENST00000401524 249 ntBASIC-0.74□□□□□ -2.53
CCDC115Q96NT0 BTF3P11-201ENST00000426582 477 ntBASIC-0.74□□□□□ -2.53
CCDC115Q96NT0 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.74□□□□□ -2.53
CCDC115Q96NT0 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-0.74□□□□□ -2.53
CCDC115Q96NT0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.74□□□□□ -2.53
CCDC115Q96NT0 RPL39P34-201ENST00000477141 156 ntBASIC-0.74□□□□□ -2.53
CCDC115Q96NT0 RNU6-469P-201ENST00000516253 101 ntBASIC-0.74□□□□□ -2.53
CCDC115Q96NT0 SNORD45.4-201ENST00000516629 73 ntBASIC-0.74□□□□□ -2.53
CCDC115Q96NT0 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.74□□□□□ -2.53
CCDC115Q96NT0 SNORD92-201ENST00000585078 85 ntBASIC-0.74□□□□□ -2.53
CCDC115Q96NT0 AC246785.4-201ENST00000605374 287 ntBASIC-0.74□□□□□ -2.53
CCDC115Q96NT0 AC064836.2-201ENST00000609491 462 ntBASIC-0.74□□□□□ -2.53
CCDC115Q96NT0 uc_338.36-201ENST00000622331 158 ntBASIC-0.74□□□□□ -2.53
CCDC115Q96NT0 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.75□□□□□ -2.53
CCDC115Q96NT0 RNU4-9P-201ENST00000364951 139 ntBASIC-0.75□□□□□ -2.53
CCDC115Q96NT0 RNU6-136P-201ENST00000384663 107 ntBASIC-0.75□□□□□ -2.53
CCDC115Q96NT0 MIR1-2-201ENST00000384961 85 ntBASIC-0.75□□□□□ -2.53
CCDC115Q96NT0 MIR802-201ENST00000390235 94 ntBASIC-0.75□□□□□ -2.53
CCDC115Q96NT0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.75□□□□□ -2.53
CCDC115Q96NT0 AC092447.3-201ENST00000426027 686 ntBASIC-0.75□□□□□ -2.53
CCDC115Q96NT0 HMGN1P33-201ENST00000432945 451 ntBASIC-0.75□□□□□ -2.53
CCDC115Q96NT0 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-0.75□□□□□ -2.53
CCDC115Q96NT0 AC116353.2-201ENST00000505332 712 ntBASIC-0.75□□□□□ -2.53
CCDC115Q96NT0 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.75□□□□□ -2.53
CCDC115Q96NT0 AL670379.3-201ENST00000605040 251 ntBASIC-0.75□□□□□ -2.53
CCDC115Q96NT0 MIR3666-201ENST00000607845 111 ntBASIC-0.75□□□□□ -2.53
CCDC115Q96NT0 uc_338.22-201ENST00000622722 187 ntBASIC-0.75□□□□□ -2.53
CCDC115Q96NT0 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.76□□□□□ -2.53
CCDC115Q96NT0 RNU4-21P-201ENST00000362802 126 ntBASIC-0.76□□□□□ -2.53
CCDC115Q96NT0 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.76□□□□□ -2.53
CCDC115Q96NT0 RNU6-108P-201ENST00000365558 107 ntBASIC-0.76□□□□□ -2.53
CCDC115Q96NT0 RNU6-1200P-201ENST00000384162 107 ntBASIC-0.76□□□□□ -2.53
CCDC115Q96NT0 RNU6-636P-201ENST00000384598 107 ntBASIC-0.76□□□□□ -2.53
CCDC115Q96NT0 RNU6-606P-201ENST00000384721 111 ntBASIC-0.76□□□□□ -2.53
CCDC115Q96NT0 SNORA26-201ENST00000391286 122 ntBASIC-0.76□□□□□ -2.53
CCDC115Q96NT0 RNA5SP163-201ENST00000410304 99 ntBASIC-0.76□□□□□ -2.53
CCDC115Q96NT0 AL022718.1-201ENST00000412004 84 ntBASIC-0.76□□□□□ -2.53
CCDC115Q96NT0 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.76□□□□□ -2.53
CCDC115Q96NT0 AL512326.2-201ENST00000426359 151 ntBASIC-0.76□□□□□ -2.53
CCDC115Q96NT0 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-0.76□□□□□ -2.53
CCDC115Q96NT0 HMGN2P32-201ENST00000444648 269 ntBASIC-0.76□□□□□ -2.53
CCDC115Q96NT0 RNU6-758P-201ENST00000516292 89 ntBASIC-0.76□□□□□ -2.53
CCDC115Q96NT0 RNU6-107P-201ENST00000516643 102 ntBASIC-0.76□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms