Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 RNU6-450P-201ENST00000364654 107 ntBASIC0.96□□□□□ -2.26
LINC00477Q96M19 Y_RNA.286-201ENST00000364813 102 ntBASIC0.96□□□□□ -2.26
LINC00477Q96M19 SNORD1A-201ENST00000364968 72 ntBASIC0.96□□□□□ -2.26
LINC00477Q96M19 Y_RNA.458-201ENST00000384240 102 ntBASIC0.96□□□□□ -2.26
LINC00477Q96M19 RNA5SP323-201ENST00000391094 133 ntBASIC0.96□□□□□ -2.26
LINC00477Q96M19 MTCO2P27-201ENST00000420740 428 ntBASIC0.96□□□□□ -2.26
LINC00477Q96M19 AC008134.1-201ENST00000420943 193 ntBASIC0.96□□□□□ -2.26
LINC00477Q96M19 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.96□□□□□ -2.26
LINC00477Q96M19 JTBP1-201ENST00000441314 247 ntBASIC0.96□□□□□ -2.26
LINC00477Q96M19 RNU1-123P-201ENST00000458950 160 ntBASIC0.96□□□□□ -2.26
LINC00477Q96M19 AC010598.1-201ENST00000510378 103 ntBASIC0.96□□□□□ -2.26
LINC00477Q96M19 AC074133.1-201ENST00000515696 183 ntBASIC0.96□□□□□ -2.26
LINC00477Q96M19 SNORA25.10-201ENST00000515926 124 ntBASIC0.96□□□□□ -2.26
LINC00477Q96M19 RNA5SP20-201ENST00000515976 84 ntBASIC0.96□□□□□ -2.26
LINC00477Q96M19 RNU7-99P-201ENST00000516271 62 ntBASIC0.96□□□□□ -2.26
LINC00477Q96M19 RNU6-1153P-201ENST00000516760 105 ntBASIC0.96□□□□□ -2.26
LINC00477Q96M19 SNORD116.3-201ENST00000517176 78 ntBASIC0.96□□□□□ -2.26
LINC00477Q96M19 RNU6-1116P-201ENST00000517269 99 ntBASIC0.96□□□□□ -2.26
LINC00477Q96M19 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.96□□□□□ -2.26
LINC00477Q96M19 AL161670.1-201ENST00000554348 137 ntBASIC0.96□□□□□ -2.26
LINC00477Q96M19 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.96□□□□□ -2.26
LINC00477Q96M19 MIR3145-201ENST00000580727 82 ntBASIC0.96□□□□□ -2.26
LINC00477Q96M19 AC006157.1-201ENST00000611750 366 ntBASIC0.96□□□□□ -2.26
LINC00477Q96M19 AL359075.3-201ENST00000613288 217 ntBASIC0.96□□□□□ -2.26
LINC00477Q96M19 AC068700.1-201ENST00000565862 3754 ntBASIC0.96□□□□□ -2.26
LINC00477Q96M19 AC005592.1-201ENST00000566527 1640 ntBASIC0.96□□□□□ -2.26
LINC00477Q96M19 Y_RNA.26-201ENST00000362539 101 ntBASIC0.95□□□□□ -2.26
LINC00477Q96M19 Y_RNA.395-201ENST00000383945 109 ntBASIC0.95□□□□□ -2.26
LINC00477Q96M19 Y_RNA.446-201ENST00000384178 104 ntBASIC0.95□□□□□ -2.26
LINC00477Q96M19 RNU6-1031P-201ENST00000384773 107 ntBASIC0.95□□□□□ -2.26
LINC00477Q96M19 RNU6-440P-201ENST00000390882 105 ntBASIC0.95□□□□□ -2.26
LINC00477Q96M19 SNORA17.3-201ENST00000391159 129 ntBASIC0.95□□□□□ -2.26
LINC00477Q96M19 MRPL35P1-201ENST00000404272 572 ntBASIC0.95□□□□□ -2.26
LINC00477Q96M19 RNU4-30P-201ENST00000410245 143 ntBASIC0.95□□□□□ -2.26
LINC00477Q96M19 RNA5SP511-201ENST00000410487 115 ntBASIC0.95□□□□□ -2.26
LINC00477Q96M19 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.95□□□□□ -2.26
LINC00477Q96M19 AC245047.3-201ENST00000429428 127 ntBASIC0.95□□□□□ -2.26
LINC00477Q96M19 CALM2P4-201ENST00000430810 426 ntBASIC0.95□□□□□ -2.26
LINC00477Q96M19 Y_RNA.639-201ENST00000458981 102 ntBASIC0.95□□□□□ -2.26
LINC00477Q96M19 RNU7-34P-201ENST00000459394 64 ntBASIC0.95□□□□□ -2.26
LINC00477Q96M19 HMGN1P13-201ENST00000505795 138 ntBASIC0.95□□□□□ -2.26
LINC00477Q96M19 RNU6-436P-201ENST00000516171 114 ntBASIC0.95□□□□□ -2.26
LINC00477Q96M19 RNU1-142P-201ENST00000516682 145 ntBASIC0.95□□□□□ -2.26
LINC00477Q96M19 RNU6-1137P-201ENST00000517073 99 ntBASIC0.95□□□□□ -2.26
LINC00477Q96M19 SUMO2P16-201ENST00000519475 264 ntBASIC0.95□□□□□ -2.26
LINC00477Q96M19 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
LINC00477Q96M19 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.95□□□□□ -2.26
LINC00477Q96M19 AC068338.1-201ENST00000565567 176 ntBASIC0.95□□□□□ -2.26
LINC00477Q96M19 AC136932.1-201ENST00000574771 208 ntBASIC0.95□□□□□ -2.26
LINC00477Q96M19 HSPE1P19-201ENST00000603327 295 ntBASIC0.95□□□□□ -2.26
LINC00477Q96M19 AL365434.2-201ENST00000607979 234 ntBASIC0.95□□□□□ -2.26
LINC00477Q96M19 MIR8063-201ENST00000621930 81 ntBASIC0.95□□□□□ -2.26
LINC00477Q96M19 AL606534.2-204ENST00000635008 178 ntBASIC0.95□□□□□ -2.26
LINC00477Q96M19 AC018630.2-201ENST00000534866 2403 ntBASIC0.94□□□□□ -2.26
LINC00477Q96M19 SNORA1B-201ENST00000362535 133 ntBASIC0.94□□□□□ -2.26
LINC00477Q96M19 Y_RNA.61-201ENST00000362835 102 ntBASIC0.94□□□□□ -2.26
LINC00477Q96M19 Y_RNA.428-201ENST00000384078 102 ntBASIC0.94□□□□□ -2.26
LINC00477Q96M19 RNU6-937P-201ENST00000384325 106 ntBASIC0.94□□□□□ -2.26
LINC00477Q96M19 Y_RNA.535-201ENST00000384612 99 ntBASIC0.94□□□□□ -2.26
LINC00477Q96M19 RNU6-360P-201ENST00000390944 104 ntBASIC0.94□□□□□ -2.26
LINC00477Q96M19 AL031003.1-201ENST00000404229 172 ntBASIC0.94□□□□□ -2.26
LINC00477Q96M19 MCFD2P1-201ENST00000417812 300 ntBASIC0.94□□□□□ -2.26
LINC00477Q96M19 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.94□□□□□ -2.26
LINC00477Q96M19 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.94□□□□□ -2.26
LINC00477Q96M19 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.94□□□□□ -2.26
LINC00477Q96M19 AC027119.1-201ENST00000440877 241 ntBASIC0.94□□□□□ -2.26
LINC00477Q96M19 MTND4P19-201ENST00000446659 478 ntBASIC0.94□□□□□ -2.26
LINC00477Q96M19 AC074290.1-201ENST00000448883 135 ntBASIC0.94□□□□□ -2.26
LINC00477Q96M19 AC093850.1-201ENST00000454121 251 ntBASIC0.94□□□□□ -2.26
LINC00477Q96M19 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.94□□□□□ -2.26
LINC00477Q96M19 RNU6-1046P-201ENST00000516538 107 ntBASIC0.94□□□□□ -2.26
LINC00477Q96M19 RNU7-4P-201ENST00000516961 62 ntBASIC0.94□□□□□ -2.26
LINC00477Q96M19 RNU7-172P-201ENST00000517125 64 ntBASIC0.94□□□□□ -2.26
LINC00477Q96M19 AL137100.2-201ENST00000555786 315 ntBASIC0.94□□□□□ -2.26
LINC00477Q96M19 AC019288.1-201ENST00000557918 224 ntBASIC0.94□□□□□ -2.26
LINC00477Q96M19 MIR4423-201ENST00000580922 80 ntBASIC0.94□□□□□ -2.26
LINC00477Q96M19 VN1R91P-201ENST00000594377 169 ntBASIC0.94□□□□□ -2.26
LINC00477Q96M19 AC104695.3-201ENST00000604052 296 ntBASIC0.94□□□□□ -2.26
LINC00477Q96M19 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.94□□□□□ -2.26
LINC00477Q96M19 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.94□□□□□ -2.26
LINC00477Q96M19 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.94□□□□□ -2.26
LINC00477Q96M19 MIR6079-201ENST00000635807 62 ntBASIC0.94□□□□□ -2.26
LINC00477Q96M19 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
LINC00477Q96M19 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
LINC00477Q96M19 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.93□□□□□ -2.26
LINC00477Q96M19 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.93□□□□□ -2.26
LINC00477Q96M19 MIRLET7C-201ENST00000362160 84 ntBASIC0.93□□□□□ -2.26
LINC00477Q96M19 Y_RNA.27-201ENST00000362540 103 ntBASIC0.93□□□□□ -2.26
LINC00477Q96M19 Y_RNA.112-201ENST00000363250 102 ntBASIC0.93□□□□□ -2.26
LINC00477Q96M19 RNA5SP99-201ENST00000364020 114 ntBASIC0.93□□□□□ -2.26
LINC00477Q96M19 Y_RNA.267-201ENST00000364679 109 ntBASIC0.93□□□□□ -2.26
LINC00477Q96M19 RNU6-505P-201ENST00000384427 107 ntBASIC0.93□□□□□ -2.26
LINC00477Q96M19 RNU6-102P-201ENST00000384485 104 ntBASIC0.93□□□□□ -2.26
LINC00477Q96M19 Y_RNA.570-201ENST00000384750 101 ntBASIC0.93□□□□□ -2.26
LINC00477Q96M19 SNORD78.2-201ENST00000391076 69 ntBASIC0.93□□□□□ -2.26
LINC00477Q96M19 AL590004.1-201ENST00000405321 300 ntBASIC0.93□□□□□ -2.26
LINC00477Q96M19 RNU5A-5P-201ENST00000411054 116 ntBASIC0.93□□□□□ -2.26
LINC00477Q96M19 AC004965.1-201ENST00000413033 213 ntBASIC0.93□□□□□ -2.26
LINC00477Q96M19 AC099799.1-201ENST00000439809 192 ntBASIC0.93□□□□□ -2.26
LINC00477Q96M19 STAG3L5P-204ENST00000443759 179 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms