Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 SNORA75.6-201ENST00000391318 127 ntBASIC1.3□□□□□ -2.2
RPGRIP1Q96KN7 AC114482.1-201ENST00000418010 247 ntBASIC1.3□□□□□ -2.2
RPGRIP1Q96KN7 RAB28P5-201ENST00000427490 651 ntBASIC1.3□□□□□ -2.2
RPGRIP1Q96KN7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.3□□□□□ -2.2
RPGRIP1Q96KN7 RNU6-625P-201ENST00000459412 107 ntBASIC1.3□□□□□ -2.2
RPGRIP1Q96KN7 RNU7-94P-201ENST00000459576 63 ntBASIC1.3□□□□□ -2.2
RPGRIP1Q96KN7 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.3□□□□□ -2.2
RPGRIP1Q96KN7 AC022493.2-201ENST00000506122 481 ntBASIC1.3□□□□□ -2.2
RPGRIP1Q96KN7 PRDX4P1-201ENST00000507189 574 ntBASIC1.3□□□□□ -2.2
RPGRIP1Q96KN7 MIR5690-201ENST00000583739 73 ntBASIC1.3□□□□□ -2.2
RPGRIP1Q96KN7 AL355073.2-201ENST00000612106 557 ntBASIC1.3□□□□□ -2.2
RPGRIP1Q96KN7 AC040896.1-201ENST00000613819 479 ntBASIC1.3□□□□□ -2.2
RPGRIP1Q96KN7 AC087588.2-201ENST00000617667 426 ntBASIC1.3□□□□□ -2.2
RPGRIP1Q96KN7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
RPGRIP1Q96KN7 RNU6-454P-201ENST00000364292 107 ntBASIC1.29□□□□□ -2.2
RPGRIP1Q96KN7 RNU6-890P-201ENST00000384121 107 ntBASIC1.29□□□□□ -2.2
RPGRIP1Q96KN7 Y_RNA.577-201ENST00000384794 101 ntBASIC1.29□□□□□ -2.2
RPGRIP1Q96KN7 MIR222-201ENST00000384992 110 ntBASIC1.29□□□□□ -2.2
RPGRIP1Q96KN7 MTCYBP4-201ENST00000401524 249 ntBASIC1.29□□□□□ -2.2
RPGRIP1Q96KN7 SNORD12B-201ENST00000410433 91 ntBASIC1.29□□□□□ -2.2
RPGRIP1Q96KN7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.29□□□□□ -2.2
RPGRIP1Q96KN7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.29□□□□□ -2.2
RPGRIP1Q96KN7 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.29□□□□□ -2.2
RPGRIP1Q96KN7 RPS29P28-201ENST00000446439 141 ntBASIC1.29□□□□□ -2.2
RPGRIP1Q96KN7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.29□□□□□ -2.2
RPGRIP1Q96KN7 RPL30P7-201ENST00000479312 323 ntBASIC1.29□□□□□ -2.2
RPGRIP1Q96KN7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.29□□□□□ -2.2
RPGRIP1Q96KN7 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.29□□□□□ -2.2
RPGRIP1Q96KN7 RNU7-172P-201ENST00000517125 64 ntBASIC1.29□□□□□ -2.2
RPGRIP1Q96KN7 SUMO2P16-201ENST00000519475 264 ntBASIC1.29□□□□□ -2.2
RPGRIP1Q96KN7 AC019288.1-201ENST00000557918 224 ntBASIC1.29□□□□□ -2.2
RPGRIP1Q96KN7 MIR4295-201ENST00000585286 85 ntBASIC1.29□□□□□ -2.2
RPGRIP1Q96KN7 AC113139.1-201ENST00000605049 239 ntBASIC1.29□□□□□ -2.2
RPGRIP1Q96KN7 MIR3674-201ENST00000636576 68 ntBASIC1.29□□□□□ -2.2
RPGRIP1Q96KN7 SNORA27.1-201ENST00000362604 124 ntBASIC1.28□□□□□ -2.2
RPGRIP1Q96KN7 RNU6-407P-201ENST00000365280 104 ntBASIC1.28□□□□□ -2.2
RPGRIP1Q96KN7 RNU6-1283P-201ENST00000365314 105 ntBASIC1.28□□□□□ -2.2
RPGRIP1Q96KN7 Y_RNA.374-201ENST00000365606 101 ntBASIC1.28□□□□□ -2.2
RPGRIP1Q96KN7 RNU6-939P-201ENST00000384634 107 ntBASIC1.28□□□□□ -2.2
RPGRIP1Q96KN7 MIR625-201ENST00000385047 85 ntBASIC1.28□□□□□ -2.2
RPGRIP1Q96KN7 MIR1285-1-201ENST00000408593 84 ntBASIC1.28□□□□□ -2.2
RPGRIP1Q96KN7 RNU6-1156P-201ENST00000410365 100 ntBASIC1.28□□□□□ -2.2
RPGRIP1Q96KN7 MTCO3P19-201ENST00000415864 321 ntBASIC1.28□□□□□ -2.2
RPGRIP1Q96KN7 AL591704.2-201ENST00000421658 181 ntBASIC1.28□□□□□ -2.2
RPGRIP1Q96KN7 AC018865.2-201ENST00000423631 129 ntBASIC1.28□□□□□ -2.2
RPGRIP1Q96KN7 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.28□□□□□ -2.2
RPGRIP1Q96KN7 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.28□□□□□ -2.2
RPGRIP1Q96KN7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.28□□□□□ -2.2
RPGRIP1Q96KN7 AC087343.1-201ENST00000477341 475 ntBASIC1.28□□□□□ -2.2
RPGRIP1Q96KN7 RNA5SP20-201ENST00000515976 84 ntBASIC1.28□□□□□ -2.2
RPGRIP1Q96KN7 RNU6-559P-201ENST00000516151 98 ntBASIC1.28□□□□□ -2.2
RPGRIP1Q96KN7 RNU6-264P-201ENST00000517134 104 ntBASIC1.28□□□□□ -2.2
RPGRIP1Q96KN7 MIR2355-201ENST00000517199 87 ntBASIC1.28□□□□□ -2.2
RPGRIP1Q96KN7 MIR3684-201ENST00000579779 74 ntBASIC1.28□□□□□ -2.2
RPGRIP1Q96KN7 AL050343.2-201ENST00000607338 280 ntBASIC1.28□□□□□ -2.2
RPGRIP1Q96KN7 AL021879.1-201ENST00000611756 288 ntBASIC1.28□□□□□ -2.2
RPGRIP1Q96KN7 MIR6079-201ENST00000635807 62 ntBASIC1.28□□□□□ -2.2
RPGRIP1Q96KN7 U6.115-201ENST00000636045 103 ntBASIC1.28□□□□□ -2.2
RPGRIP1Q96KN7 Y_RNA.393-201ENST00000383936 102 ntBASIC1.27□□□□□ -2.21
RPGRIP1Q96KN7 RNU6-1105P-201ENST00000384774 107 ntBASIC1.27□□□□□ -2.21
RPGRIP1Q96KN7 SNORA69.1-201ENST00000390904 137 ntBASIC1.27□□□□□ -2.21
RPGRIP1Q96KN7 Y_RNA.592-201ENST00000410274 109 ntBASIC1.27□□□□□ -2.21
RPGRIP1Q96KN7 RNA5SP475-201ENST00000410568 110 ntBASIC1.27□□□□□ -2.21
RPGRIP1Q96KN7 SNX2P2-201ENST00000424553 323 ntBASIC1.27□□□□□ -2.21
RPGRIP1Q96KN7 PGBD4P5-201ENST00000445958 426 ntBASIC1.27□□□□□ -2.21
RPGRIP1Q96KN7 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.27□□□□□ -2.21
RPGRIP1Q96KN7 MTCO3P10-201ENST00000455912 772 ntBASIC1.27□□□□□ -2.21
RPGRIP1Q96KN7 AL034345.1-201ENST00000407768 123 ntBASIC1.26□□□□□ -2.21
RPGRIP1Q96KN7 MTND4P28-201ENST00000426217 387 ntBASIC1.26□□□□□ -2.21
RPGRIP1Q96KN7 RPL30P15-201ENST00000457129 321 ntBASIC1.26□□□□□ -2.21
RPGRIP1Q96KN7 RPS23P4-201ENST00000487908 423 ntBASIC1.26□□□□□ -2.21
RPGRIP1Q96KN7 AC105758.1-201ENST00000506038 399 ntBASIC1.26□□□□□ -2.21
RPGRIP1Q96KN7 RNU6-113P-201ENST00000516653 101 ntBASIC1.26□□□□□ -2.21
RPGRIP1Q96KN7 CYP3A52P-201ENST00000563326 91 ntBASIC1.26□□□□□ -2.21
RPGRIP1Q96KN7 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.26□□□□□ -2.21
RPGRIP1Q96KN7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
RPGRIP1Q96KN7 SNORA25.8-201ENST00000364831 128 ntBASIC1.25□□□□□ -2.21
RPGRIP1Q96KN7 STAG3L5P-204ENST00000443759 179 ntBASIC1.25□□□□□ -2.21
RPGRIP1Q96KN7 Y_RNA.653-201ENST00000459091 95 ntBASIC1.25□□□□□ -2.21
RPGRIP1Q96KN7 AC091021.1-201ENST00000468051 388 ntBASIC1.25□□□□□ -2.21
RPGRIP1Q96KN7 RNU6-470P-201ENST00000515954 104 ntBASIC1.25□□□□□ -2.21
RPGRIP1Q96KN7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.25□□□□□ -2.21
RPGRIP1Q96KN7 RAB11AP2-201ENST00000545905 639 ntBASIC1.25□□□□□ -2.21
RPGRIP1Q96KN7 AL512310.8-201ENST00000550183 120 ntBASIC1.25□□□□□ -2.21
RPGRIP1Q96KN7 RPL21P9-201ENST00000556149 474 ntBASIC1.25□□□□□ -2.21
RPGRIP1Q96KN7 AC005828.6-201ENST00000606610 232 ntBASIC1.25□□□□□ -2.21
RPGRIP1Q96KN7 AC073349.3-201ENST00000617616 186 ntBASIC1.25□□□□□ -2.21
RPGRIP1Q96KN7 AL513423.1-201ENST00000621695 132 ntBASIC1.25□□□□□ -2.21
RPGRIP1Q96KN7 Y_RNA.124-201ENST00000363339 93 ntBASIC1.24□□□□□ -2.21
RPGRIP1Q96KN7 Y_RNA.142-201ENST00000363491 102 ntBASIC1.24□□□□□ -2.21
RPGRIP1Q96KN7 RNY3P11-201ENST00000364153 102 ntBASIC1.24□□□□□ -2.21
RPGRIP1Q96KN7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.24□□□□□ -2.21
RPGRIP1Q96KN7 RNU6-376P-201ENST00000384731 106 ntBASIC1.24□□□□□ -2.21
RPGRIP1Q96KN7 MIR873-201ENST00000401120 77 ntBASIC1.24□□□□□ -2.21
RPGRIP1Q96KN7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.24□□□□□ -2.21
RPGRIP1Q96KN7 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.24□□□□□ -2.21
RPGRIP1Q96KN7 MRPS18CP6-201ENST00000423587 223 ntBASIC1.24□□□□□ -2.21
RPGRIP1Q96KN7 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.24□□□□□ -2.21
RPGRIP1Q96KN7 AL137792.2-201ENST00000443484 235 ntBASIC1.24□□□□□ -2.21
RPGRIP1Q96KN7 RNU6-408P-201ENST00000515910 100 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms